Dbfetch
ID AY253140; SV 1; linear; mRNA; STD; VRT; 1268 BP. XX AC AY253140; XX DT 02-MAY-2003 (Rel. 75, Created) DT 03-NOV-2004 (Rel. 81, Last updated, Version 2) XX DE Oncorhynchus mykiss MHC class 1b antigen (Onmy-UGA) mRNA, Onmy-UGA*0101 DE allele, complete cds. XX KW . XX OS Oncorhynchus mykiss (rainbow trout) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; OC Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; OC Salmonidae; Salmoninae; Oncorhynchus. XX RN [1] RP 1-1268 RX DOI; 10.1016/j.fsi.2004.07.007. RX PUBMED; 15519543. RA Kiryu I., Dijkstra J.M., Sarder R.I., Fujiwara A., Yoshiura Y., Ototake M.; RT "New MHC class Ia domain lineages in rainbow trout (Oncorhynchus mykiss) RT which are shared with other fish species"; RL Fish Shellfish Immunol 18(3):243-254(2005). XX RN [2] RP 1-1268 RA Kiryu I., Dijkstra J.M., Sarder R.I., Ototake M.; RT "New alpha 1 domain lineages found in MHC class Ia of rainbow trout RT (Oncorhynchus mykiss): conservation of variation"; RL Unpublished. XX RN [3] RP 1-1268 RA Dijkstra J.M., Sarder R.I., Ototake M.; RT ; RL Submitted (10-MAR-2003) to the INSDC. RL Immunology Section, National Research Institute of Aquaculture, Hiruta RL 224-1, Tamaki, Mie-ken 519-0423, Japan XX DR MD5; 5682e1991416052691d1fd53a4a4bf93. DR EuropePMC; PMC6523485; 31027287. XX FH Key Location/Qualifiers FH FT source 1..1268 FT /organism="Oncorhynchus mykiss" FT /mol_type="mRNA" FT /db_xref="taxon:8022" FT gene 1..1268 FT /gene="Onmy-UGA" FT /allele="Onmy-UGA*0101" FT CDS 175..1236 FT /codon_start=1 FT /gene="Onmy-UGA" FT /allele="Onmy-UGA*0101" FT /product="MHC class 1b antigen" FT /db_xref="GOA:Q860J0" FT /db_xref="InterPro:IPR001039" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR011161" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR036179" FT /db_xref="InterPro:IPR037055" FT /db_xref="UniProtKB/TrEMBL:Q860J0" FT /protein_id="AAP04358.1" FT /translation="MKTNFIILFCIHGALSVRHSLRYFYTTSSEIPAFPEFVDMGMVND FT QVISHYDSITKRKVPKQSWMETFFDQQYWDSTTENLKSAESIFKTNIQIAQKRFNQTGG FT IHISQDMYGCTWDDETGFTEGFHHIGYDGQDLLTFDVKTATWIALVPQALHSKMKWEMD FT LSGIKSKKSYLTQDCIEWLKKYLDYGKTTLQRTVPPSVSLLQKTPSSPVTCHATGFYPS FT GVMVFWQKDGQEQHEDVENGETLPNDDGTFQKSTHLTVTPEEWKNNKYQCVVQVTGIKE FT DFIKVLTEFEIQTNWGDPAPNCIPIIGGVVALLLVVVVVGVVIWKKKSKKGFVPASSSD FT TDSDNSGKGLLKI" XX SQ Sequence 1268 BP; 365 A; 290 C; 310 G; 303 T; 0 other; acagaaacac attttcactg gttgcgtcct tagcggtgct gaagtttggt ggaacaaatc 60 aataatgtag gcaatttaaa ttgtaataca gtttaaattg gctatattac tgaattagat 120 acaaactgtt cccgaattcg gacaacgtta atgaaaacca gactcatcga cgccatgaag 180 accaatttta ttatcctctt ttgtattcat ggagctttat cggtgagaca ttccctgcgc 240 tacttctaca caacctcctc agaaatccca gccttccctg agtttgtgga catggggatg 300 gtgaatgatc aggtcattag ccactatgac agcatcacga agaggaaggt ccccaagcag 360 agctggatgg agacgttttt tgaccagcag tattgggata gcaccacaga gaacctgaaa 420 agtgcagaga gcattttcaa aaccaacatt cagatagcac agaagcgttt caatcaaaca 480 ggaggcatac acattagcca ggacatgtat ggctgtacat gggatgatga gacaggattc 540 acagaagggt ttcaccatat tggatatgat ggacaagacc tcctgacatt tgacgtgaag 600 acggcgacat ggattgcctt agtcccgcag gctctccact ccaaaatgaa gtgggaaatg 660 gacctgtctg gcattaagag caagaaaagc tacctcaccc aggattgcat tgagtggctg 720 aagaagtacc tggactatgg gaagactact ctgcagagga cagtccctcc ctcagtgtct 780 ctgctccaga agaccccctc ctctccagtg acctgccacg ctacaggttt ctaccccagt 840 ggagtcatgg tgttctggca gaaagatggg caagaacagc atgaagatgt ggagaatgga 900 gagactctcc caaacgatga tggaaccttc cagaaaagca cccacctcac agtgacgcct 960 gaggagtgga agaacaacaa gtatcagtgt gtggttcagg tcactggtat caaggaggac 1020 ttcatcaagg ttctgactga gtttgagatc cagaccaact ggggtgaccc agcccccaac 1080 tgtatcccca tcattggagg ggtggtagct ctcctcctgg tcgttgttgt tgttggggtt 1140 gtcatttgga agaagaagag caagaaaggc tttgttccag ccagctcttc cgacactgac 1200 tctgacaact ctgggaaagg tctcctgaag atttgagaaa cctctgcact tctgtaacat 1260 cagagagc 1268 //