Dbfetch
ID AY204559; SV 1; linear; mRNA; STD; VRT; 2706 BP. XX AC AY204559; XX DT 05-NOV-2003 (Rel. 77, Created) DT 29-JAN-2004 (Rel. 78, Last updated, Version 2) XX DE Xenopus tropicalis MHC class I antigen (UAA) mRNA, UAA*02 allele, complete DE cds. XX KW . XX OS Xenopus tropicalis (tropical clawed frog) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; OC Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana. XX RN [1] RP 1-2706 RX DOI; 10.1002/eji.200324207. RX PUBMED; 14579270. RA Ohta Y., Powis S.J., Lohr R.L., Nonaka M., Pasquier L.D., Flajnik M.F.; RT "Two highly divergent ancient allelic lineages of the transporter RT associated with antigen processing (TAP) gene in Xenopus: further evidence RT for co-evolution among MHC class I region genes"; RL Eur. J. Immunol. 33(11):3017-3027(2003). XX RN [2] RP 1-2706 RA Ohta Y., Flajnik M.F.; RT ; RL Submitted (12-DEC-2002) to the INSDC. RL Microbiology and Immunology, University of Maryland, 655 W. Baltimore RL Street, Baltimore, MD 21201, USA XX DR MD5; 6809c1c1bd51323b53319d1756753618. DR IMGT/LIGM; AY204559. XX FH Key Location/Qualifiers FH FT source 1..2706 FT /organism="Xenopus tropicalis" FT /mol_type="mRNA" FT /db_xref="taxon:8364" FT gene 1..2706 FT /gene="UAA" FT /allele="UAA*02" FT CDS 16..1068 FT /codon_start=1 FT /gene="UAA" FT /allele="UAA*02" FT /product="MHC class I antigen" FT /db_xref="GOA:Q6XXY3" FT /db_xref="InterPro:IPR001039" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR011161" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR036179" FT /db_xref="InterPro:IPR037055" FT /db_xref="UniProtKB/TrEMBL:Q6XXY3" FT /protein_id="AAP36728.1" FT /translation="MDVRLVPLLLTLGVSAVYSGSHSLRYYYTAVSDRAFGLPEFSTAG FT YVDETQIERYSSDNGKSEPAAQWMKQNEGPEYRDEQTQILKGNEAVFKHNVKVAMDRFN FT QTSGTHIVQSMYGCELREDGSTRGYEQDGYDGREFLALDTERWVYVPSMREAQLTTQKW FT NSPEVNEPERERNYLENICIEWLKRYLGYGQAELERRVRPHVKISDRQSDGNTELHCQA FT YGFYPREIDVKWVRNGKDDVHSEEAKEILPNPDGSYQLRVTAEVTPKEGDSYACHVEHS FT SLEEKLIVVWPGPNKDGKNMVIIIAGVVVAVLLITAAVVGFAFYKKRKAKSGYTETASN FT DSPASSVARA" XX SQ Sequence 2706 BP; 789 A; 519 C; 624 G; 769 T; 5 other; aagcatacta tcagaatgga tgtgcgtcta gttcccctcc tgctcacttt gggggtatct 60 gcagtgtatt ctggcagtca ttccctgcgc tactattata cagcagtctc agatcgagcc 120 tttgggctcc cagaattttc cacagctggg tatgtggatg agacacagat tgaaagatac 180 agcagtgaca atggaaagtc tgaacctgca gctcagtgga tgaagcagaa tgagggtcct 240 gaatacaggg acgaacaaac acagatcctc aaaggcaacg aggctgtgtt taagcacaat 300 gtaaaggttg caatggatcg cttcaaccag acctcaggta cccacatcgt tcagagcatg 360 tacggctgtg agctgcgaga ggacggcagt acccgggggt atgagcagga tggatacgat 420 gggagagagt tcctagcgct ggatacagag agatgggtgt atgtaccttc catgcgcgag 480 gcgcagctca ctacccagaa gtggaacagc ccggaggtta atgagcctga gagagagagg 540 aattacctgg agaatatctg tatcgagtgg ctgaagagat acctgggcta cgggcaggca 600 gagctggagc ggagagttcg ccctcatgta aagatttcag atcgccaatc agatggcaat 660 acagagcttc actgccaggc gtatggattc tatcccagag aaatagatgt caaatgggtg 720 aggaatggta aagatgatgt acactcggag gaagccaaag agatccttcc caaccctgat 780 ggcagctacc agctcagagt cactgctgag gttacaccca aggaaggtga cagttatgcc 840 tgccatgtgg aacacagcag cctggaggag aagctcattg ttgtgtggcc aggccccaat 900 aaagatggaa aaaacatggt tattattatt gctggtgttg ttgttgctgt actgctgatc 960 actgctgctg ttgttggatt tgctttctac aagaaaagga aagccaagtc tggttacaca 1020 gaaactgcaa gtaatgattc tcctgcttca tctgttgcta gagcttaagg gtgacgtgtt 1080 ctaagaaaga agcagtgaaa tatgcggaag tagaggagac aagaaacctg atttgatttg 1140 tttgcttctg ttctaaaata tatttccatt atagaaagga atgtttttaa tttgcttcat 1200 cataaatatt gggttgttat aacattcaat attcagcatt ctggtgtgat catattgctt 1260 aaatataagg gtgtaggttt atgttgttta agttttaaat gtttttgatt tttgaattgt 1320 aaaaatgaat gtaaaacatg tgcaacttat ccatgtagca cagtgtatgg tagaattatt 1380 tgattacatt tgcagggatt gtataaagct aagaacaaac tggttcgtca gttgtataat 1440 ttccttttct acccagaata ccaaactggc atctgagttt catatttctt ctcataaact 1500 cccacggaat gtcacctact gtatcttgta ttggcagtgt tgtcatattt gccattatta 1560 ttattattat tattattatt ttacaagtga tttcatgtaa ccttctgctc aattggctca 1620 attatctgtc caaccagtgc atacaggaat tatgcaagca ccttacctta tagcattcat 1680 ggcctcccag tacttggcct cctctctcct gcatgccctc agctttcagt gctcatgttt 1740 tttctacacc ctaaagtcta acaagccctc ttcaggagta tgtcatacac agctctcagc 1800 accatttttc aaatttagaa attcctgaac aaaccccttc cttactgctt ctgtttccag 1860 gcatgacaag ttccaggatt gtagaactgg aaactttggt tctctgcgtc tctatacagt 1920 tgtcagnggg attggaggga actgtcgttc antaactggn ccangataaa agtaaatgtt 1980 ccctactatg ggctgacatt atgaaagaat gaaaaccctt gagaaaattt atagctgggg 2040 ctgatgccac ntcttattca acttacaatt caaaagctgg ggggttgaag cctgggtgct 2100 cacatgtggt acagaggtca cagtgtgggt catacagtgg tgttgttctg gatatgaacc 2160 agggcagaac taagggtagg cagaagaagc atgtgcctag ggtgggggct gtcttgcaga 2220 ccctgcaaga gtgtagaggg cttagtaggg ctctaagtaa tgagtgactt caatagacct 2280 tagtagaata gttaactcac caatgtctgg ggccctacac tgaatttgct gtggggccca 2340 gtaatatgta gttatggcac tggaaatgcc catcatgatg ggagacacca tgtcactttc 2400 agtggaacca catatagcgg tcataacaca acagtgattg gtctaatgtt gtctaaggaa 2460 agtatcctca taaagaaagc aatatcaaag ttcctcttat gcagaaaatt tatgttttag 2520 gaatcaaaga aaatttccaa ttaacatcag agtacatttt tctttgaata gaaaccttaa 2580 ccaagagcct ttcttgtgaa caggagtaga agcaacagtt tcattgaatt taaaaatttg 2640 cctgctgtaa gtttttctct gaataaattc taaataaaat ctctataaat acacaaaaaa 2700 aaaaaa 2706 //