Dbfetch

ID   AY191778; SV 1; linear; mRNA; STD; MAM; 1103 BP.
XX
AC   AY191778;
XX
DT   15-AUG-2003 (Rel. 76, Created)
DT   16-APR-2005 (Rel. 83, Last updated, Version 2)
XX
DE   Sus scrofa MHC class II antigen (SLA-DQB) mRNA, SLA-DQB*bs133 allele,
DE   complete cds.
XX
KW   .
XX
OS   Sus scrofa (pig)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae; Sus.
XX
RN   [1]
RP   1-1103
RA   Zeng R., Zeng Y.-Z.;
RT   "Molecular cloning and characterization of SLA II genes of the Banna
RT   Minipig inbred strain";
RL   Unpublished.
XX
RN   [2]
RP   1-1103
RA   Zeng R., Zeng Y.-Z.;
RT   ;
RL   Submitted (06-DEC-2002) to the INSDC.
RL   Animal Scienty Technology College, Banna Minipig Inbred Strain Institute,
RL   Yunnan Agriculture University, Heilongtang, Kunming, Yunnan 650201, China
XX
DR   MD5; 91886aee3d24751bf609976e550f02bb.
XX
CC   On Jul 15, 2003 this sequence version replaced gi:?
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1103
FT                   /organism="Sus scrofa"
FT                   /chromosome="7"
FT                   /map="7q1.1"
FT                   /mol_type="mRNA"
FT                   /db_xref="taxon:9823"
FT   gene            1..1103
FT                   /gene="SLA-DQB"
FT                   /allele="SLA-DQB*bs133"
FT   CDS             34..819
FT                   /codon_start=1
FT                   /gene="SLA-DQB"
FT                   /product="MHC class II antigen"
FT                   /db_xref="GOA:Q8MHS9"
FT                   /db_xref="InterPro:IPR000353"
FT                   /db_xref="InterPro:IPR003006"
FT                   /db_xref="InterPro:IPR003597"
FT                   /db_xref="InterPro:IPR007110"
FT                   /db_xref="InterPro:IPR011162"
FT                   /db_xref="InterPro:IPR013783"
FT                   /db_xref="InterPro:IPR014745"
FT                   /db_xref="InterPro:IPR036179"
FT                   /db_xref="UniProtKB/TrEMBL:Q8MHS9"
FT                   /protein_id="AAP86644.1"
FT                   /translation="MSGMVALRLPRGLWTAAVTVMLVVLGAPVAEGRDSPQDFVYQFKF
FT                   ECYFYNGTQRVRLVARWVYNREEHVRFDSDVGEFRAVTPLGRPDADYWNGQKEVLEQKR
FT                   AELDTVCKHNYQIEEGTTLQRRVQPTVTISPSKAEALNHHNLLVCAVTDFYPSQVKVQW
FT                   FRNGQEETAGVVSTPLIRNGDWTYQVLVMLEMNLQRGDVYTCRVEHSSLQSPILVEWRA
FT                   QSESAQSKMLSGVGGFVLGLIFLGLGLFIRHRSQKGLVR"
XX
SQ   Sequence 1103 BP; 212 A; 308 C; 333 G; 250 T; 0 other;
     tgactaccat tacttcttcg tttgtcctca attatgtctg ggatggtggc tctgcggctc        60
     cccagaggcc tttggacagc ggccgtgacg gtgatgctgg tggtgctggg tgctccggtg       120
     gctgagggca gagactctcc acaggatttc gtgtaccagt ttaagttcga gtgctacttc       180
     tacaacggaa cgcagcgggt gcggctcgtg gccaggtggg tctacaaccg ggaggagcac       240
     gtgcgcttcg acagcgacgt gggggagttc cgggcggtga ccccgctggg gcggccggac       300
     gccgactact ggaacggcca gaaggaggtc ctggagcaga agcgggccga gctggacacg       360
     gtgtgcaaac acaactacca gatagaggaa ggcacgaccc tgcagcggcg agtgcaacct       420
     acagtgacta tctccccatc caaggcagag gctctaaacc accacaacct gctggtctgt       480
     gcggtgacag atttctatcc aagccaggtg aaagtccagt ggttccggaa tggccaggag       540
     gagacagctg gcgttgtgtc cactcctctt attaggaacg gagactggac ctaccaggtg       600
     ctcgtgatgc tagagatgaa tctccagcga ggagatgtct acacctgccg cgtggagcac       660
     tccagcctcc agagccccat cttggtggag tggcgggcac agtctgaatc tgcccagagc       720
     aagatgctga gcggtgtcgg gggcttcgtg ctggggctga tcttcctcgg gctgggcctt       780
     ttcatccgtc acaggagtca gaaggggctc gtgcgctgaa tcctgaagat actttggggt       840
     tggtttttgc tcttcttaaa tgtctgtctg ttcttgcctg gaattcccat cccccctgcc       900
     agcttgtcct ctctgaggtc agatcctaca gtgactctga tgcagtcacc agggcgcttc       960
     ctgtgatccc cacctcaagg ctctggctgt gaagcttctt cctgaactga ccccagcgcc      1020
     tctgcctgag tgcagccagc tgtgtctact cagaccacaa gggattttcc tgttcctatt      1080
     tcccctcaac agactgtgca aga                                              1103
//