Dbfetch

Dbfetch

ID   AY135599; SV 1; linear; mRNA; STD; MAM; 1185 BP.
XX
AC   AY135599;
XX
DT   09-OCT-2002 (Rel. 73, Created)
DT   16-APR-2005 (Rel. 83, Last updated, Version 2)
XX
DE   Sus scrofa MHC class I antigen (SLA-B) mRNA, SLA-B*mel20 allele, complete
DE   cds.
XX
KW   .
XX
OS   Sus scrofa (pig)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae; Sus.
XX
RN   [1]
RP   1-1185
RA   Martens G.W., Baker J.E., Smith D.M.;
RT   ;
RL   Submitted (24-JUL-2002) to the INSDC.
RL   Pathology - Transplant Immunology Lab, Baylor University Medical Center,
RL   3500 Gaston Ave., Dallas, TX 75246, USA
XX
DR   MD5; 5465b1889f4c14dadc96f55796070653.
DR   EuropePMC; PMC3036124; 21637434.
DR   IMGT/LIGM; AY135599.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1185
FT                   /organism="Sus scrofa"
FT                   /chromosome="7"
FT                   /mol_type="mRNA"
FT                   /note="breed: Hanford"
FT                   /db_xref="taxon:9823"
FT   CDS             5..1099
FT                   /codon_start=1
FT                   /gene="SLA-B"
FT                   /product="MHC class I antigen"
FT                   /db_xref="GOA:Q8HX60"
FT                   /db_xref="InterPro:IPR001039"
FT                   /db_xref="InterPro:IPR003006"
FT                   /db_xref="InterPro:IPR003597"
FT                   /db_xref="InterPro:IPR007110"
FT                   /db_xref="InterPro:IPR010579"
FT                   /db_xref="InterPro:IPR011161"
FT                   /db_xref="InterPro:IPR011162"
FT                   /db_xref="InterPro:IPR013783"
FT                   /db_xref="InterPro:IPR036179"
FT                   /db_xref="InterPro:IPR037055"
FT                   /db_xref="UniProtKB/TrEMBL:Q8HX60"
FT                   /protein_id="AAN35116.1"
FT                   /translation="MRVRGPQAILILLSGALALTGTWAGPHSLSYFYTAVSRPDRGDSR
FT                   FIAVGYVDDTQFVRFDSDAPNPRMEPRAPWIEQEGQGYWDRETRNVMGSAQTYRVNLNT
FT                   LRGYYNQSEAGSHTIQIMYGCDVGPDGLLLRGYRQDAYDGADYIALNEDLRSWTAADMA
FT                   AQITKRKWEAADVAEGERSYLQGRCVEWLQKYLEMGKDTLQRAEPPKTHVTRHPSSDLG
FT                   VTLRCWALGFYPKEISLTWQREGQDQSQDMELVETRPSGDGTFQKWAALVVPPGEEQSY
FT                   TCHVQHEGLQEPLTLRWDPPQPPVPIVGIIVGLVLLLVAVAMVTGVVIWRKKRSGEKGG
FT                   SYTQAAGSDSAQGSDVSLTKDPRV"
XX
SQ   Sequence 1185 BP; 227 A; 362 C; 396 G; 200 T; 0 other;
     aaagatgcgg gtcaggggcc ctcaagccat cctcattctg ctgtcggggg ccctggccct        60
     gaccgggacc tgggcgggtc cccactccct gagctatttc tacaccgccg tgtcccggcc       120
     cgaccgcggg gactcccgct tcatcgccgt cggctacgtg gacgacacgc agttcgtgcg       180
     gttcgacagc gacgccccca atccgcggat ggagccgcgg gcgccgtgga tcgaacagga       240
     ggggcagggg tattgggatc gggagacgcg gaacgtcatg ggcagcgcac agacttaccg       300
     agtgaacctg aacaccctgc gcggctacta caaccagagc gaggccgggt ctcacaccat       360
     ccagatcatg tacggctgcg acgtggggcc agacgggctc ctcctccgcg ggtacagaca       420
     ggacgcctac gacggcgccg attacatcgc cctgaacgag gacctgcgct cctggaccgc       480
     ggcggacatg gcggctcaga tcaccaagcg caagtgggag gcggccgatg tggcggaggg       540
     agagaggagc tacctgcagg gccggtgtgt ggagtggctc cagaaatacc tggagatggg       600
     gaaggacacg ctgcagcgcg cagagcctcc aaagacacat gtgacccgcc accccagctc       660
     tgacctgggg gtcaccttga ggtgctgggc cctgggcttc taccctaagg agatctccct       720
     gacctggcag cgggagggcc aggaccagag ccaggacatg gagctggtgg agaccaggcc       780
     ctcaggggat gggaccttcc agaagtgggc ggccctggtg gtgcctcctg gagaggagca       840
     gagctacacc tgccatgtgc agcacgaggg cctgcaggag cccctcaccc tgagatggga       900
     ccctcctcag ccccccgtcc ccatcgtggg catcattgtt ggcctggttc tcctcctggt       960
     cgctgtagcc atggtgactg gagttgtgat ctggaggaag aagcgctcag gtgaaaaagg      1020
     agggagctac actcaggctg caggcagtga cagtgcccag ggctccgatg tgtcccttac      1080
     caaggatcct agagtgtgag acagctgcct tgtggggact gagtgacaca gatttgttca      1140
     cgtcccactt tgtgacttca gatcccctga ctcctgtttc tgcag                      1185
//