Dbfetch

ID   AM980449; SV 1; linear; genomic DNA; STD; HUM; 646 BP.
XX
AC   AM980449;
XX
DT   04-APR-2008 (Rel. 95, Created)
DT   04-APR-2008 (Rel. 95, Last updated, Version 1)
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DE   Homo sapiens partial HLA-C gene for MHC class I antigen, HLA-C*07 allele,
DE   isolate 249317, exons 2-3
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KW   .
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OS   Homo sapiens (human)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC   Homo.
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RN   [1]
RP   1-646
RA   Lebedeva T.V.;
RT   ;
RL   Submitted (02-APR-2008) to the INSDC.
RL   Lebedeva T.V., HLA laboratory, American Red Cross New England Region, 180
RL   Rustcraft Rd, Dedham, MA 02026, USA.
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RN   [2]
RA   Lebedeva T.V., Ohashi M.K., Mastromarino S.A., Alosco S.M., Zannelli G.,
RA   Yu N.;
RT   "Novel HLA Class I alleles identified in minority populations";
RL   Unpublished.
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DR   MD5; 8a7395c0dbacd51d558535770a2414fe.
DR   IMGT/HLA; C*07:61N; HLA03439.
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FH   Key             Location/Qualifiers
FH
FT   source          1..646
FT                   /organism="Homo sapiens"
FT                   /chromosome="6"
FT                   /map="6p21"
FT                   /isolate="249317"
FT                   /mol_type="genomic DNA"
FT                   /tissue_type="whole blood"
FT                   /PCR_primers="fwd_name: Cw7F, fwd_seq:
FT                   agtgcggggttgggagggaag, rev_name: Cwintr4R, rev_seq:
FT                   ccaagcctcagccctgacc"
FT                   /db_xref="taxon:9606"
FT   CDS             join(<1..270,371..>646)
FT                   /pseudo
FT                   /codon_start=3
FT                   /gene="HLA-C"
FT                   /allele="HLA-C*07"
FT   exon            1..270
FT                   /gene="HLA-C"
FT                   /allele="HLA-C*07"
FT                   /number=2
FT   gap             271..370
FT                   /estimated_length=unknown
FT   exon            371..646
FT                   /gene="HLA-C"
FT                   /allele="HLA-C*07"
FT                   /number=3
XX
SQ   Sequence 646 BP; 104 A; 173 C; 198 G; 71 T; 100 other;
     gctcccactc catgaggtat ttcgacaccg ccgtgtcccg gcccggccgc ggagagcccc        60
     gcttcatctc agtgggctac gtggacgaca cgcagttcgt gcggttcgac agcgacgccg       120
     cgagtccgag aggggagccg cgggcgccgt gggtggagca ggaggggccg gagtattggg       180
     accgggagac acagaagtac aagcgctagg cacaggctga ccgagtgagc ctgcggaacc       240
     tgcgcggcta ctacaaccag agcgaggacg nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn       300
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn       360
     nnnnnnnnnn ggtctcacac cctccagagg atgtctggct gcgacctggg gcccgacggg       420
     cgcctcctcc gcgggtatga ccagtccgcc tacgacggca aggattacat cgccctgaac       480
     gaggacctgc gctcctggac cgccgcggac accgcggctc agatcaccca gcgcaagttg       540
     gaggcggccc gtgcggcgga gcagctgaga gcctacctgg agggcacgtg cgtggagtgg       600
     ctccgcagat acctggagaa cgggaaggag acgctgcagc gcgcag                      646
//