Dbfetch

ID   AM920503; SV 1; linear; genomic DNA; STD; HUM; 645 BP.
XX
AC   AM920503;
XX
DT   01-DEC-2007 (Rel. 94, Created)
DT   01-DEC-2007 (Rel. 94, Last updated, Version 1)
XX
DE   Homo sapiens partial HLA-B gene for nonfunctional MHC class I antigen,
DE   HLA-B*07 BKH0707N-null allele, exons 2-3, isolate MHHI-602067
XX
KW   .
XX
OS   Homo sapiens (human)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC   Homo.
XX
RN   [1]
RP   1-645
RA   Horn P.A.;
RT   ;
RL   Submitted (29-NOV-2007) to the INSDC.
RL   Horn P.A., Institute for Transfusion Medicine, Hannover Medical School,
RL   Carl-Neuberg-Str. 1, Hannover, 30625, GERMANY.
XX
RN   [2]
RA   Horn P.A., Mueller K., Blasczyk R.;
RT   "A novel HLA-B*07 null allele.";
RL   Unpublished.
XX
DR   MD5; 3cb09b15bda709a4754f9b06b4d9dec6.
DR   IMGT/HLA; B*07:67N; HLA03413.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..645
FT                   /organism="Homo sapiens"
FT                   /map="6p21.3"
FT                   /isolate="MHHI-602067"
FT                   /mol_type="genomic DNA"
FT                   /identified_by="Peter Horn"
FT                   /tissue_type="peripheral blood"
FT                   /db_xref="taxon:9606"
FT   CDS             join(<1..269,370..>645)
FT                   /pseudo
FT                   /codon_start=3
FT                   /gene="HLA-B"
FT                   /allele="HLA-B*07 BKH0707N-null"
FT                   /product="nonfunctional MHC class I antigen"
FT                   /function="antigen presenting molecule"
FT                   /note="contains single nucleotide deletion in exon 2
FT                   resulting in stop codon"
FT                   /db_xref="PSEUDO:CAP46864.1"
FT   exon            1..269
FT                   /gene="HLA-B"
FT                   /allele="HLA-B*07 BKH0707N-null"
FT                   /number=2
FT   gap             270..369
FT                   /estimated_length=unknown
FT   exon            370..645
FT                   /gene="HLA-B"
FT                   /allele="HLA-B*07 BKH0707N-null"
FT                   /number=3
XX
SQ   Sequence 645 BP; 111 A; 171 C; 194 G; 69 T; 100 other;
     gctcccactc catgaggtat ttctacacct ccgtgtcccg gccggccgcg gggagccccg        60
     cttcatctca gtgggctacg tggacgacac ccagttcgtg aggttcgaca gcgacgccgc       120
     gagtccgaga gaggagccgc gggcgccgtg gatagagcag gaggggccgg agtattggga       180
     ccggaacaca cagatctaca aggcccaggc acagactgac cgagagagcc tgcggaacct       240
     gcgcggctac tacaaccaga gcgaggccgn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn       300
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn       360
     nnnnnnnnng gtctcacacc ctccagagca tgtacggctg cgacgtgggg ccggacgggc       420
     gcctcctccg cgggcatgac cagtacgcct acgacggcaa ggattacatc gccctgaacg       480
     aggacctgcg ctcctggacc gccgcggaca cggcggctca gatcacccag cgcaagtggg       540
     aggcggcccg tgaggcggag cagcggagag cctacctgga gggcgagtgc gtggagtggc       600
     tccgcagata cctggagaac gggaaggaca agctggagcg cgctg                       645
//