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EBI Dbfetch

ID   AM696974; SV 1; linear; genomic DNA; STD; ENV; 1505 BP.
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AC   AM696974;
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DT   20-APR-2007 (Rel. 91, Created)
DT   14-MAY-2008 (Rel. 95, Last updated, Version 2)
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DE   Uncultured bacterium partial 16S rRNA gene, isolate BF0002A159
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KW   16S ribosomal RNA; 16S rRNA gene.
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OS   uncultured bacterium
OC   Bacteria; environmental samples.
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RN   [1]
RP   1-1505
RA   Rintala H.I.;
RT   ;
RL   Submitted (05-APR-2007) to the INSDC.
RL   Rintala H.I., Environmental Health Department, National Public Health
RL   Institute, P.O.Box 95, Kuopio, 70500, FINLAND.
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RN   [2]
RX   DOI; 10.1186/1471-2180-8-56.
RX   PUBMED; 18397514.
RA   Rintala H., Pitkaranta M., Toivola M., Paulin L., Nevalainen A.;
RT   "Diversity and seasonal dynamics of bacterial community in indoor
RT   environment";
RL   BMC Microbiol. 8:56-56(2008).
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DR   MD5; 5321fab71f9ab2f9cdc06dbff16249e1.
DR   EuropePMC; PMC2323381; 18397514.
DR   RFAM; RF00177; SSU_rRNA_bacteria.
DR   RFAM; RF01959; SSU_rRNA_archaea.
DR   SILVA-SSU; AM696974.
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FH   Key             Location/Qualifiers
FH
FT   source          1..1505
FT                   /organism="uncultured bacterium"
FT                   /environmental_sample
FT                   /isolate="BF0002A159"
FT                   /mol_type="genomic DNA"
FT                   /country="Finland"
FT                   /isolation_source="indoor dust"
FT                   /db_xref="taxon:77133"
FT   rRNA            <1..>1505
FT                   /gene="16S rRNA"
FT                   /product="16S ribosomal RNA"
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SQ   Sequence 1505 BP; 397 A; 331 C; 450 G; 319 T; 8 other;
     gatgaacact ggcngnnngn ctantacatg naagtcgagc gaacggacga ggagcttgct        60
     cctttgaagt tagcggcgga cgggtgagta acacgtgggt aacctaccta taagactgga       120
     ataactccgg gaagccgggg ctaatgccgg ataacatgtt gaaccgcatg gttcaacagt       180
     gaaagacggt cttgctgtca cttatagatg gacccgcgcc gtattagcta gttggtgggg       240
     taacggccta ccaaggcgac gatacgtagc cgacctgaga gggtgatcgg ccacactgga       300
     actgagacac ggtccagact cctacgggag gcagcagtag ggaatcttcc gcaatgggcg       360
     aaagcctgac ggagcaacgc cgcgtgagtg atgaaggtct tcggatcgta aagctctgtt       420
     gttagggaag aacaaatgtg taagtaactg tgcacgtctt gacggtacct aaccagaaag       480
     ccacggctaa ctacgtgcca gcagccgcgg taatacgtag gtggcaagcg ttatccggaa       540
     ttattgggcg taaagcgcgc gtaggcggtt ttttaagtct gatgtgaaag cccacggctc       600
     aaccgtggag ggtcattgga aactggaaaa cttgagtgca gaagaggaaa gtggaattcc       660
     atgtgtagcg gtgaaatgcg cagagatatg gaggaacacc agtggcgaag gcggctttct       720
     ggtctgcaac tgacgctgat gtgcgaaagc gtggggatca aacaggatta gataccctgg       780
     tagtccacgc cgtaaacgat gagtgctaag tgttaggggg tttccgcccc ttagtgctgc       840
     agctaacgca ttaagcactc cgcctgggga gtacggtcgc aagactgaaa ctcaaaggaa       900
     ttgacgggga cccgcacaag cggtggagca tgtggtttaa ttcgaagcaa cgcgaagaac       960
     cttaccaaat cttgacatcc tttgaccgct ctagagatag agttttcctc ttcggaggac      1020
     aaagtgacag gtggtgcatg gttgtcgtca gctcgtgtcg tgagatgttg ggttaagtcc      1080
     cgncaacgag cgcaaccctt gagcttagtt gccatcatta agttgggcac tctaagttga      1140
     ctgccggtga caaaccggag gaaggtgggg atgacgtcaa atcatcatgc cccttatgat      1200
     ttgggctaca cacgtgctac aatggacaat acaaagggca gcgaaaccgc gaggtcaagc      1260
     aaatcccata aagttgttct cagttcggat tgtagtctgc aactcgacta catgaagctg      1320
     gaatcgctag taatcgtaga tcagcatgct acggtgaata cgttcccggg tcttgtacac      1380
     accgcccgtc acaccacgag agtttgtaac acccgaagcc ggtggagtaa ccattttgga      1440
     gctagccgtc gaaggtggga caaatgattg gggtgaagtc gtaacaaggt agccgtatcg      1500
     gaagg                                                                  1505
//


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