ID AM422966; SV 1; linear; genomic DNA; STD; HUM; 646 BP.
XX
AC AM422966;
XX
DT 18-JAN-2007 (Rel. 90, Created)
DT 17-JUN-2008 (Rel. 96, Last updated, Version 2)
XX
DE Homo sapiens partial HLA-C gene for MHC class I antigen, HLA-Cw*04new
DE allele, isolate 238305, exons 2-3
XX
KW allele HLA-Cw*04new; HLA-C gene; human leucocyte antigen C;
KW major histocompatibility complex; MHC class I antigen.
XX
OS Homo sapiens (human)
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC Homo.
XX
RN [1]
RP 1-646
RA Lebedeva T.V.;
RT ;
RL Submitted (16-JAN-2007) to the INSDC.
RL Lebedeva T.V., HLA Laboratory, American Red Cross, 180 Rustcraft Rd, MA,
RL 02026, USA.
XX
RN [2]
RA Lebedeva T.V., Zanelly G., Mastromarino S., Alosco S., Ohashi M., Yu N.;
RT "New HLA-C alleles identified in minority populations";
RL Unpublished.
XX
DR MD5; b21c40e5bbb4975e07746be7b3ece60c.
DR IMGT/HLA; HLA-C*04:25; HLA02822.
XX
FH Key Location/Qualifiers
FH
FT source 1..646
FT /organism="Homo sapiens"
FT /chromosome="6"
FT /map="6p21.3"
FT /isolate="238305"
FT /mol_type="genomic DNA"
FT /tissue_type="whole blood"
FT /db_xref="taxon:9606"
FT CDS join(<1..270,371..>646)
FT /codon_start=3
FT /gene="HLA-C"
FT /allele="HLA-Cw*04new"
FT /product="MHC class I antigen"
FT /function="antigen presenting molecule"
FT /db_xref="InterPro:IPR001039"
FT /db_xref="InterPro:IPR011161"
FT /db_xref="InterPro:IPR011162"
FT /db_xref="InterPro:IPR037055"
FT /db_xref="UniProtKB/TrEMBL:A2BCW2"
FT /protein_id="CAM23855.1"
FT /translation="SHSMRYFSTSVSWPGRGEPRFIAVGYVDDTQFLRFDSDAASPRGE
FT PREPWVEQEGPEYWDRETQKYKRQAQADRVNLRKLRGYYNQSEDGSHTLQRMFGCDLGP
FT DGRLLRGYNQFAYDGKDYIALNEDLRSWTAADTAAQITQRKWEAAREAEQRRAYLEGTC
FT VEWLRRYLENGKETLQRA"
FT exon <1..270
FT /gene="HLA-C"
FT /allele="HLA-Cw*04new"
FT /number=2
FT gap 271..370
FT /estimated_length=unknown
FT exon 371..>646
FT /gene="HLA-C"
FT /allele="HLA-Cw*04new"
FT /number=3
XX
SQ Sequence 646 BP; 108 A; 166 C; 199 G; 73 T; 100 other;
gctcccactc catgaggtat ttctccacat ccgtgtcctg gcccggccgc ggggagcccc 60
gcttcatcgc agtgggctac gtggacgaca cgcagttcct gcggttcgac agcgacgccg 120
cgagtccaag aggggagccg cgggagccgt gggtggagca ggaggggccg gagtattggg 180
accgggagac acagaagtac aagcgccagg cacaggctga ccgagtgaac ctgcggaaac 240
tgcgcggcta ctacaaccag agcgaggacg nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 300
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 360
nnnnnnnnnn ggtctcacac cctccagagg atgtttggct gcgacctggg gccggacggg 420
cgcctcctcc gcgggtataa ccagttcgcc tacgacggca aggattacat cgccctgaac 480
gaggatctgc gctcctggac cgccgcggac acggcggctc agatcaccca gcgcaagtgg 540
gaggcggccc gtgaggcgga gcagcggaga gcctacctgg agggcacgtg cgtggagtgg 600
ctccgcagat acctggagaa cgggaaggag acgctgcagc gcgcgg 646
//