Dbfetch

ID   AM422609; SV 1; linear; genomic DNA; STD; HUM; 270 BP.
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AC   AM422609;
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DT   15-JAN-2007 (Rel. 90, Created)
DT   08-AUG-2008 (Rel. 96, Last updated, Version 3)
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DE   Homo sapiens partial HLA-A gene for MHC class I antigen, HLA*02new allele,
DE   exon 2, isolate 4214678
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KW   HLA*02new allele; HLA-A gene; human leucocyte antigen A;
KW   major histocompatibility complex; MHC class I antigen.
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OS   Homo sapiens (human)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC   Homo.
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RN   [1]
RP   1-270
RA   Hammond L.;
RT   ;
RL   Submitted (11-JAN-2007) to the INSDC.
RL   Hammond L., Tissue Typing, Molecular Genetics, New Zealand Blood Service,
RL   Private Bag 92071 Auckland Mail Centre, Auckland 1142, NEW ZEALAND.
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RN   [2]
RX   DOI; 10.1111/j.1399-0039.2008.01080.x.
RX   PUBMED; 18721279.
RA   Hammond L., Limmer M., Dyer C.R., Rantes C.H., Dunn P.P.J.;
RT   "A new HLA-A*02 null allele, HLA-A*9213N";
RL   Tissue Antigens 72(2):176-177(2008).
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DR   MD5; c701de22af42b50e837a9d5003cebd19.
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FH   Key             Location/Qualifiers
FH
FT   source          1..270
FT                   /organism="Homo sapiens"
FT                   /chromosome="6"
FT                   /isolate="4214678"
FT                   /mol_type="genomic DNA"
FT                   /cell_type="mixed leucocytes"
FT                   /tissue_type="peripheral blood"
FT                   /note="new HLA-A*02null allele resulting from G-A at nt251
FT                   resulting in premature stop at codon 60 in exon 2"
FT                   /db_xref="taxon:9606"
FT   CDS             <1..>270
FT                   /codon_start=2
FT                   /gene="HLA-A"
FT                   /allele="HLA*02new"
FT                   /product="MHC class I antigen"
FT                   /function="antigen presenting molecule"
FT                   /db_xref="IMGT/HLA:A*02:113:01N"
FT                   /db_xref="UniProtKB/TrEMBL:A2BCQ6"
FT                   /protein_id="CAM12704.1"
FT                   /translation="LSLHEVFLHIRVPARPRGAPLHRSGLRGRHAVRAVRQRRREPEDG
FT                   AAGAVDRAGGSGVLGRGDTESEGPLTDSPSGPGDPARLLQPERGR"
FT   exon            1..270
FT                   /gene="HLA-A"
FT                   /allele="A*02new"
FT                   /number=2
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SQ   Sequence 270 BP; 54 A; 82 C; 95 G; 39 T; 0 other;
     gctctcactc catgaggtat ttcttcacat ccgtgtcccg gcccggccgc ggggagcccc        60
     gcttcatcgc agtgggctac gtggacgaca cgcagttcgt gcggttcgac agcgacgccg       120
     cgagccagag gatggagccg cgggcgccgt ggatagagca ggagggtccg gagtattagg       180
     acggggagac acggaaagtg aaggcccact cacagactca ccgagtggac ctggggaccc       240
     tgcgcggcta ctacaaccag agcgaggccg                                        270
//