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EBI Dbfetch

ID   AM408327; SV 1; linear; genomic DNA; STD; ROD; 1262 BP.
XX
AC   AM408327;
XX
DT   26-JUL-2007 (Rel. 92, Created)
DT   26-JUL-2007 (Rel. 92, Last updated, Version 1)
XX
DE   Praomys tullbergi partial IRBP gene for interphotoreceptor retinoid binding
DE   protein
XX
KW   interphotoreceptor retinoid binding protein; IRBP gene.
XX
OS   Praomys tullbergi
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea;
OC   Muridae; Murinae; Praomys.
XX
RN   [1]
RP   1-1262
RA   Chevret P.;
RT   ;
RL   Submitted (12-OCT-2006) to the INSDC.
RL   Chevret P., Equipe Laudet, LBMC (UMR 5161), Ecole Normale Superieure de
RL   Lyon, 46 Allee d'Italie, 69364 Lyon CEDEX 07, FRANCE.
XX
RN   [2]
RA   Michaux J., Chevret P., Renaud S.;
RT   "Morphological diversity of Old World rats and mice (Rodentia, Muridae)
RT   mandible in relation with phylogeny and adaptation";
RL   J. Zool. Syst. Evol. Res. 45(3):263-279(2007).
XX
DR   MD5; 2b3b5a09b34b1c7de80df373e3fc640d.
DR   EuropePMC; PMC2490707; 18616808.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1262
FT                   /organism="Praomys tullbergi"
FT                   /mol_type="genomic DNA"
FT                   /country="Gabon:M'Passa"
FT                   /collected_by="V. Nance"
FT                   /tissue_lib="T-422"
FT                   /db_xref="taxon:209869"
FT   CDS             <1..>1262
FT                   /codon_start=1
FT                   /gene="IRBP"
FT                   /product="interphotoreceptor retinoid binding protein"
FT                   /db_xref="GOA:A7DW89"
FT                   /db_xref="InterPro:IPR005151"
FT                   /db_xref="InterPro:IPR029045"
FT                   /db_xref="UniProtKB/TrEMBL:A7DW89"
FT                   /protein_id="CAL64034.1"
FT                   /translation="LMGMQAAIEQAMKSHEILGISDPQTLAHVLTAGVQSSLNDPRLFI
FT                   SYEPSTLEAPQQAPALTNLTREELLAQIQRNIHHEVLKGNVGYLRVDDLPGQEVLSELG
FT                   EFLVSHVWKQLMGTSSLVLDLRHCAGGHVSGIPYVISYLNPGNTVMHVDTIYDRPSNTT
FT                   TEIWTLPKVLGERYSADKDVVVLTSGHTGGVAEDIAYILKQMRRAIVVGERTEGGALDL
FT                   QKLRIGQSNFFLTVPVSRSLGPLGGGGQTWEGSGVLPCVGTPAEQALEKALAILTLRRA
FT                   LPGVVLRLQEALQDYYTLVDRVPGLLHHLASMDYSAVVSEEDLVTKLNAGLQAVSEDPR
FT                   LLVRATGPRETSSRPETGPNDPPEATPEVPKEEDARRALVDSVFQVSVLPGNVGYLRFD
FT                   RFADASVLRTLGPYVLQQVWEP"
XX
SQ   Sequence 1262 BP; 268 A; 366 C; 374 G; 253 T; 1 other;
     ctgatgggaa tgcaagcagc catcgagcag gctatgaaga gtcatgagat tctgggcatc        60
     tcagaccctc agacgctggc ccatgtgctg acagctggag tacagagttc cttgaatgac       120
     ccacgtctct tcatctccta tgagcccagt accctcgagg ctccccagca agcaccagcg       180
     ctcaccaacc tcacccgwga agaactgctg gcccagatac agaggaacat ccaccatgag       240
     gttcttaagg gcaacgtggg ctacctacga gtggatgatc tccccggcca ggaggtactg       300
     agcgagctgg gggagttttt agtgagccat gtgtggaagc agctcatggg cacctcctcc       360
     ttggtgctcg atctccggca ctgtgctggt ggccatgtct ctgggatccc ttatgtcatc       420
     tcttacttga accctgggaa cactgtcatg cacgtggata ccatctacga tcggccctcc       480
     aacaccacca cagagatctg gaccttgccc aaggtcctag gggagagata cagtgctgac       540
     aaggatgtag tggtcctcac cagtggacat actgggggag tcgctgagga catcgcctac       600
     atcctcaagc agatgcgccg ggccatcgtg gtgggtgagc ggacggaggg tggtgccctg       660
     gacctccaga agctgagaat aggccagtcc aacttcttcc tcacagtgcc tgtgtccagg       720
     tccctgggac ccctaggtgg aggtggccag acatgggaag gcagtggagt gctgccctgt       780
     gtggggacac ctgcagagca agccctagaa aaagccctgg ccatcctcac cctgcgtcgg       840
     gccctgccag gggttgtcct ccgacttcag gaagccctac aggactatta cacattagtg       900
     gaccgagtgc cgggcctgct gcaccacttg gccagcatgg actattcggc cgtggtctct       960
     gaagaggacc tggtgacaaa gctcaacgct ggcttgcagg ctgtgtccga agatcccagg      1020
     ctcctagtga gagccaccgg acccagagaa acctcctcaa gacctgagac tggacctaat      1080
     gatcccccag aagccacccc tgaggtgccc aaggaagaag atgcccggag ggccctggtg      1140
     gattctgtgt ttcaggtgtc cgtgctgcca ggcaatgtgg gctacctgcg ctttgacaga      1200
     tttgcagacg cctctgtgct gaggacgctg ggcccttatg tgctgcagca ggtgtgggag      1260
     cc                                                                     1262
//


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