Dbfetch
ID AM076816; SV 1; linear; genomic DNA; STD; HUM; 3377 BP.
XX
AC AM076816;
XX
DT 25-AUG-2005 (Rel. 85, Created)
DT 17-JUN-2008 (Rel. 96, Last updated, Version 3)
XX
DE Homo sapiens HLA-B gene for MHC class I antigen, B*3541 allele, exons 1-7
XX
KW HLA-B gene; HLA-B*3541 allele; human leucocyte antigen B;
KW major histocompatibility complex; MHC class I antigen.
XX
OS Homo sapiens (human)
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC Homo.
XX
RN [1]
RP 1-3377
RA Dunn P.P.J.;
RT ;
RL Submitted (24-AUG-2005) to the INSDC.
RL Dunn P.P.J., Tissue Typing, New Zealand Blood Service, 71 Great South Road,
RL Epsom PO Box 26611 Auckland, NEW ZEALAND.
XX
RN [2]
RA Dunn P., Hammond L., Darke C.;
RT "HLA-B*3541 is a serological HLA B variant";
RL Unpublished.
XX
DR MD5; 52e0e973e77377e60c67d4e672c35f01.
XX
FH Key Location/Qualifiers
FH
FT source 1..3377
FT /organism="Homo sapiens"
FT /chromosome="6"
FT /mol_type="genomic DNA"
FT /db_xref="taxon:9606"
FT CDS join(302..374,504..773,1019..1294,1870..2145,2250..2366,
FT 2808..2840,2947..2990)
FT /gene="HLA-B"
FT /allele="HLA-B*3541"
FT /product="MHC class I antigen"
FT /function="antigen presenting molecule"
FT /db_xref="GOA:Q3ZUB3"
FT /db_xref="IMGT/HLA:B*35:41"
FT /db_xref="InterPro:IPR001039"
FT /db_xref="InterPro:IPR003006"
FT /db_xref="InterPro:IPR003597"
FT /db_xref="InterPro:IPR007110"
FT /db_xref="InterPro:IPR010579"
FT /db_xref="InterPro:IPR011161"
FT /db_xref="InterPro:IPR011162"
FT /db_xref="InterPro:IPR013783"
FT /db_xref="InterPro:IPR036179"
FT /db_xref="InterPro:IPR037055"
FT /db_xref="UniProtKB/TrEMBL:Q3ZUB3"
FT /protein_id="CAJ28576.1"
FT /translation="MRVTAPRTVLLLLWGAVALTETWAGSHSMRYFYTAMSRPGRGEPR
FT FIAVGYVDDTQFVRFDSDAASPRTEPRAPWIEQEGPEYWDRNTQIFKTNTQTYRESLRN
FT LRGYYNQSEAGSHIIQRMYGCDLGPDGRLLRGHDQSACDGKDYIALNEDLSSWTAADTA
FT AQITQRKWEAARVAEQLRAYLEGLCVEWLRRYLENGKETLQRADPPKTHVTHHPVSDHE
FT ATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRY
FT TCHVQHEGLPKPLTLRWEPSSQSTIPIVGIVAGLAVLAVVVIGAVVATVMCRRKSSGGK
FT GGSYSQAASSDSAQGSDVSLTA"
FT exon 302..374
FT /gene="HLA-B"
FT /allele="HLA-B*3541"
FT /number=1
FT intron 375..503
FT /gene="HLA-B"
FT /allele="HLA-B*3541"
FT /number=1
FT exon 504..773
FT /gene="HLA-B"
FT /allele="HLA-B*3541"
FT /number=2
FT intron 774..1018
FT /gene="HLA-B"
FT /allele="HLA-B*3541"
FT /number=2
FT exon 1019..1294
FT /gene="HLA-B"
FT /allele="HLA-B*3541"
FT /number=3
FT intron 1295..1869
FT /gene="HLA-B"
FT /allele="HLA-B*3541"
FT /number=3
FT exon 1870..2145
FT /gene="HLA-B"
FT /allele="HLA-B*3541"
FT /number=4
FT intron 2146..2249
FT /gene="HLA-B"
FT /allele="HLA-B*3541"
FT /number=4
FT exon 2250..2366
FT /gene="HLA-B"
FT /allele="HLA-B*3541"
FT /number=5
FT intron 2367..2807
FT /gene="HLA-B"
FT /allele="HLA-B*3541"
FT /number=5
FT exon 2808..2840
FT /gene="HLA-B"
FT /allele="HLA-B*3541"
FT /number=6
FT intron 2841..2946
FT /gene="HLA-B"
FT /allele="HLA-B*3541"
FT /number=6
FT exon 2947..2990
FT /gene="HLA-B"
FT /allele="HLA-B*3541"
FT /number=7
XX
SQ Sequence 3377 BP; 626 A; 984 C; 1059 G; 708 T; 0 other;
tggtgtagga gaagagggat caggacgaag tcccaggccc cgggcggggc tctcagggtc 60
tcaggctccg agagccttgt ctgcattggg gaggcgcagc gttggggatt ccccactccc 120
acgagtttca cttcttctcc caacctatgt cgggtccttc ttccaggata ctcgtgacgc 180
gtccccattt cccactccca ttgggtgtcg gatatctaga gaagccaatc agtgtcgccg 240
gggtcccagt tctaaagtcc ccacgcaccc acccggactc agaatctcct cagacgccga 300
gatgcgggtc acggcgcccc gaaccgtcct cctgctgctc tggggggcag tggccctgac 360
cgagacctgg gccggtgagt gcggggtcgg gagggaaatg gcctctgtgg ggaggagcga 420
ggggaccgca ggcgggggcg caggacctga ggagccgcgc cgggaggagg gtcgggcggg 480
tctcagcccc tcctcgcccc caggctccca ctccatgagg tatttctaca ccgccatgtc 540
ccggcccggc cgcggggagc cccgcttcat cgcagtgggc tacgtggacg acacccagtt 600
cgtgaggttc gacagcgacg ccgcgagtcc gaggacggag ccccgggcgc catggataga 660
gcaggagggg ccggagtatt gggaccggaa cacacagatc ttcaagacca acacacagac 720
ttaccgagag agcctgcgga acctgcgcgg ctactacaac cagagcgagg ccggtgagtg 780
accccggccc ggggcgcagg tcacgactcc ccatccccca cgtacggccc gggtcgcccc 840
gagtctccgg gtccgagatc cgcctccctg aggccgcggg acccgcccag accctcgacc 900
ggcgagagcc ccaggcgcgt ttacccggtt tcattttcag ttgaggccaa aatccccgcg 960
ggttggtcgg ggcggggcgg ggctcggggg acggggctga ccgcggggcc ggggccaggg 1020
tctcacatca tccagaggat gtatggctgc gacctggggc ccgacgggcg cctcctccgc 1080
gggcatgacc agtccgcctg cgacggcaag gattacatcg ccctgaacga ggacctgagc 1140
tcctggaccg cggcggacac cgcggctcag atcacccagc gcaagtggga ggcggcccgt 1200
gtggcggagc agctgagagc ctacctggag ggcctgtgcg tggagtggct ccgcagatac 1260
ctggagaacg ggaaggagac gctgcagcgc gcgggtacca ggggcagtgg ggagccttcc 1320
ccatctccta taggtcgccg gggatggcct cccacgagaa gaggaggaaa atgggatcag 1380
cgctagaatg tcgccctccc ttgaatggag aatggcatga gttttcctga gtttcctctg 1440
agggccccct cttctctcta ggacaattaa gggatgacgt ctctgaggaa atggagggga 1500
agacagtccc tagaatactg atcaggggtc ccctttgacc cctgcagcag ccttgggaac 1560
cgtgactttt cctctcaggc cttgttctct gcctcacact cagtgtgttt ggggctctga 1620
ttccagcact tctgagtcac tttacctcca ctcagatcag gagcagaagt ccctgttccc 1680
cgctcagaga ctcgaacttt ccaatgaata ggagattatc ccaggtgcct gcgtccaggc 1740
tggtgtctgg gttctgtgcc ccttccccac accaggtgtc ctgtccattc tcaggctggt 1800
cacatgggtg gtcctagggt gtcccatgag agatgcaaag cgcctgaatt ttctgactct 1860
tcccatcaga ccccccaaag acacacgtga cccaccaccc cgtctctgac catgaggcca 1920
ccctgaggtg ctgggccctg ggcttctacc ctgcggagat cacactgacc tggcagcggg 1980
atggcgagga ccaaactcag gacactgagc ttgtggagac cagaccagca ggagatagaa 2040
ccttccagaa gtgggcagct gtggtggtgc cttctggaga agagcagaga tacacatgcc 2100
atgtacagca tgaggggctg ccgaagcccc tcaccctgag atggggtaag gagggggatg 2160
aggggtcata tctcttctca gggaaagcag gagcccttct ggagcccttc agcagggtca 2220
gggcccctcg tcttcccctc ctttcccaga gccatcttcc cagtccacca tccccatcgt 2280
gggcattgtt gctggcctgg ctgtcctagc agttgtggtc atcggagctg tggtcgctac 2340
tgtgatgtgt aggaggaaga gctcaggtag ggaaggggtg aggggtgggg tctgggtttt 2400
cttgtcccac tgggggtttc aagccccagg tagaagtgtt ccctgcctca ttactgggaa 2460
gcagcatcca cacaggggct aacgcagcct gggaccctgt gtgccagcac ttactctttt 2520
gtgcagcaca tgtgacaatg aaggacggat gtatcacctt gatggttgtg gtgttggggt 2580
cctgatttca gcattcatga gtcaggggaa ggtccctgct aaggacagac cttaggaggg 2640
cagttggtcc aggacccaca cttgctttcc tcgtgtttcc tgatcctgcc ttgggtctgt 2700
agtcatactt ctggaaattc cttttgggtc caagacgagg aggttcctct aagatctcat 2760
ggccctgctt cctcccagtc ccctcacagg acattttctt cccacaggtg gaaaaggagg 2820
gagctactct caggctgcgt gtaagtggtg ggggtgggag tgtggaggag ctcacccacc 2880
ccataattcc tcctgtccca cgtctcctgc gggctctgac caggtcctgt ttttgttcta 2940
ctccagccag cgacagtgcc cagggctctg atgtgtctct cacagcttga aaaggtgaga 3000
ttcttggggt ctagagtggg cggggggggc ggggaggggg cagaggggaa aggcctgggt 3060
aatggagatt ctttgattgg gatgtttcgc gtgtgtcgtg ggctgttcag agtgtcatca 3120
cttaccatga ctaaccagaa tttgttcatg actgttgttt tctgtagcct gagacagctg 3180
tcttgtgagg gactgagatg caggatttct tcactcctcc cctttgtgac ttcaagagcc 3240
tctggcatct ctttctgcaa aggcacctga atgtgtctgc gtccctgtta gcctaatgtg 3300
aggaggtgga gagacagccc acccccgtgt ccactgtgac ccctgttccc atgctgacct 3360
gtgttttcct ccccaga 3377
//
