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EBI Dbfetch

ID   AJ616302; SV 1; linear; genomic DNA; STD; HUM; 270 BP.
XX
AC   AJ616302;
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DT   11-DEC-2003 (Rel. 78, Created)
DT   17-JUN-2008 (Rel. 96, Last updated, Version 4)
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DE   Homo sapiens partial HLA-Cw gene for MHC class I antigen, HLA-Cw*03 allele,
DE   exon 2 and joined CDS, isolate 226727
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KW   HLA-Cw gene; HLA-Cw*03 allele; human leucocyte antigen Cw;
KW   major histocompatibility complex; MHC class I antigen.
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OS   Homo sapiens (human)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC   Homo.
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RN   [1]
RP   1-270
RA   Lebedeva T.V.;
RT   ;
RL   Submitted (02-DEC-2003) to the INSDC.
RL   Lebedeva T.V., HLA Laboratory, American Red Cross New England Region, 180
RL   Rustcraft Rd, Dedham, MA 02026, USA.
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RN   [2]
RA   Lebedeva T.V., Ohashi M., Huang A., Vasconcellos S., Yu N.;
RT   "Novel HLA-Cw alleles identified by single allele sequencing";
RL   Unpublished.
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DR   MD5; 7f96a1c9971c2317d47a6b2da1de969d.
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FH   Key             Location/Qualifiers
FH
FT   source          1..270
FT                   /organism="Homo sapiens"
FT                   /chromosome="6"
FT                   /map="6p21.3"
FT                   /isolate="226727"
FT                   /mol_type="genomic DNA"
FT                   /tissue_type="whole blood"
FT                   /db_xref="taxon:9606"
FT   mRNA            join(<1..270,AJ616303.1:1..>276)
FT                   /gene="HLA-Cw"
FT                   /allele="HLA-Cw*03"
FT   CDS             join(<1..270,AJ616303.1:1..>276)
FT                   /codon_start=3
FT                   /gene="HLA-Cw"
FT                   /allele="HLA-Cw*03"
FT                   /product="MHC class I antigen"
FT                   /function="antigen presenting molecule"
FT                   /db_xref="GOA:Q546A6"
FT                   /db_xref="IMGT/HLA:C*03:03:04"
FT                   /db_xref="InterPro:IPR001039"
FT                   /db_xref="InterPro:IPR011161"
FT                   /db_xref="InterPro:IPR011162"
FT                   /db_xref="InterPro:IPR027648"
FT                   /db_xref="UniProtKB/TrEMBL:Q546A6"
FT                   /protein_id="CAE82739.2"
FT                   /translation="SHSMRYFYTAVSRPGRGEPHFIAVGYVDDTQFVRFDSDAASPRGE
FT                   PRAPWVEQEGPEYWDRETQKYKRQAQTDRVSLRNLRGYYNQSEARSHIIQRMYGCDVGP
FT                   DGRLLRGYDQYAYDGKDYIALNEDLRSWTAADTAAQITQRKWEAAREAEQLRAYLEGLC
FT                   VEWLRRYLKNGKETLQRA"
FT   exon            1..270
FT                   /gene="HLA-Cw"
FT                   /allele="HLA-Cw*03"
FT                   /number=2
XX
SQ   Sequence 270 BP; 54 A; 83 C; 98 G; 35 T; 0 other;
     gctcccactc catgaggtat ttctacaccg ctgtgtcccg gcccggccgc ggggagcccc        60
     acttcatcgc agtgggctac gtggacgaca cgcagttcgt gcggttcgac agcgacgccg       120
     cgagtccgag aggggagccg cgggcgccgt gggtggagca ggaggggccg gagtattggg       180
     accgggagac acagaagtac aagcgccagg cacagactga ccgagtgagc ctgcggaacc       240
     tgcgcggcta ctacaaccag agcgaggcca                                        270
//


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