Dbfetch
ID AJ580806; SV 1; linear; genomic DNA; STD; HUM; 1916 BP. XX AC AJ580806; XX DT 25-AUG-2003 (Rel. 77, Created) DT 17-JUN-2008 (Rel. 96, Last updated, Version 6) XX DE Homo sapiens partial MICA gene for MHC class I polypeptide-related protein DE A, MICA*00701var allele, exons 2-5 XX KW MHC class I polypeptide-related protein A; MICA gene; MICA*00701var allele. XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-1916 RA Quiroga I.; RT ; RL Submitted (08-AUG-2003) to the INSDC. RL Quiroga I., Nuffield Department of Surgery, University of Oxford, Tissue RL Typing Lab. Churchill Hospital, Old Road, Headington, Oxford, OX3 7LJ, RL UNITED KINGDOM. XX RN [3] RX DOI; 10.1111/j.1399-0039.2006.00574.x. RX PUBMED; 16634869. RA Quiroga I., Sweeney D., Sutton M., Ahmad T., Walton R., Barnardo M., RA Fuggle S.V.; RT "The identification of three novel MICA alleles by sequence-based typing"; RL Tissue Antigens 67(4):321-325(2006). XX DR MD5; dfb4683c41c7009482dc0b4e2d8cc973. DR Ensembl-Gn; ENSG00000183214; homo_sapiens. DR Ensembl-Gn; ENSG00000235233; homo_sapiens. DR Ensembl-Tr; ENST00000400325; homo_sapiens. DR Ensembl-Tr; ENST00000418465; homo_sapiens. DR Ensembl-Tr; ENST00000547609; homo_sapiens. DR IMGT/HLA; MICA*007:03; HLA02147. XX FH Key Location/Qualifiers FH FT source 1..1916 FT /organism="Homo sapiens" FT /chromosome="6" FT /isolate="patient identifier: U181" FT /mol_type="genomic DNA" FT /country="United Kingdom" FT /db_xref="taxon:9606" FT intron <1 FT /gene="MICA" FT /allele="MICA*00701var" FT /number=1 FT CDS join(<2..256,531..818,1406..1684,1785..>1916) FT /codon_start=3 FT /gene="MICA" FT /allele="MICA*00701var" FT /product="MHC class I polypeptide-related protein A" FT /db_xref="GOA:Q29983" FT /db_xref="HGNC:HGNC:7090" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR011161" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR036179" FT /db_xref="InterPro:IPR037055" FT /db_xref="PDB:1B3J" FT /db_xref="PDB:1HYR" FT /db_xref="UniProtKB/Swiss-Prot:Q29983" FT /protein_id="CAE45582.2" FT /translation="PHSLRYNLTVLSWDGSVQSGFLAEVHLDGQPFLRCDRQKCRAKPQ FT GQWAEDVLGNKTWDRETRDLTGNGKDLRMTLAHIKDQKEGLHSLQEIRVCEIHEDNSTR FT SSQHFYYDGELFLSQNLETEEWTMPQSSRAQTLAMNVRNFLKEDAMKTKTHYHAMHADC FT LQELRRYLKSGVVLRRTVPPMVNVTRSEASEGNITVTCRASGFYPWNITLSWRQDGVSL FT SHDTQQWGDVLPDGNGTYQTWVATRICQGEEQRFTCYMEHSGNHSTHPVPSGKVLVLQS FT HWQTFHVSAVAAAAIFVIIIFYVRCCKKKTSAAEGP" FT exon 2..256 FT /gene="MICA" FT /allele="MICA*00701var" FT /number=2 FT intron 257..530 FT /gene="MICA" FT /allele="MICA*00701var" FT /number=2 FT exon 531..818 FT /gene="MICA" FT /allele="MICA*00701var" FT /number=3 FT intron 819..1405 FT /gene="MICA" FT /allele="MICA*00701var" FT /number=3 FT exon 1406..1684 FT /gene="MICA" FT /allele="MICA*00701var" FT /number=4 FT intron 1685..1784 FT /gene="MICA" FT /allele="MICA*00701var" FT /number=4 FT exon 1785..1916 FT /gene="MICA" FT /allele="MICA*00701var" FT /number=5 XX SQ Sequence 1916 BP; 438 A; 503 C; 579 G; 396 T; 0 other; gagccccaca gtcttcgtta taacctcacg gtgctgtcct gggatggatc tgtgcagtca 60 gggtttctcg ctgaggtaca tctggatggt cagcccttcc tgcgctgtga caggcagaaa 120 tgcagggcaa agccccaggg acagtgggca gaagatgtcc tgggaaataa gacatgggac 180 agagagacca gggacttgac agggaacgga aaggacctca ggatgaccct ggctcatatc 240 aaggaccaga aagaaggtga gagtcggcag gggcaagagt gactggagag gccttttcca 300 gaaaagttag gggcagagag cggggacctg tatctaccca ctggatctgg ctcaggctgg 360 gggtgaggaa tgggggtcag tggaactcag cagggaggtg agccggcact cagcccacac 420 agggaggcat ggaggagggc cagggaggcg taccccctgg gctgagttcc tcacttgggt 480 ggaaaggtga tgggttcggg aatggagaag tcactgctgg gtgggggcag gcttgcattc 540 cctccaggag attagggtct gtgagatcca tgaagacaac agcaccagga gctcccagca 600 tttctactat gatggggagc tcttcctctc ccaaaacctg gagactgagg aatggacaat 660 gccccagtcc tccagagctc agaccttggc catgaacgtc aggaatttct tgaaggaaga 720 tgccatgaag accaagacac actatcacgc tatgcatgca gactgcctgc aggaactacg 780 gcgatatcta aaatccggcg tagtcctgag gagaacaggt accgacgctg gccaggggct 840 ctcctctccc tccaattctg ctagagttgc ctcacctccc agatgtgtcc agggaaaccc 900 tccctgtgct atggatgaag gcatttcctg ttggcacatc gtgtcctgat tttcctctat 960 tgttagagcc actggataaa gacagtgggt cagggactgg accatccagt gttgtaatca 1020 gggcaagtag aggaccctcc gacagaatcc tgagcctggg gtgggtgtca ggcaggagag 1080 gaaggcttca gggccagggc tgccccctct gcctcccagc ctgcccatcc tggagagttc 1140 cctcctggcc ccacaaccca ggagtccacc cctgacatcc ccctcctcag catcaatgtg 1200 gggatcccag agcctgaggc cacagtccca tggcccatcc tcctgccagc ctggaagaac 1260 tgggccccag agtgaggaca gacttgcagg tcaggggtcc cagagggctt cagccagagt 1320 gagaacagtg aagagaaaca gccctgttcc tctcccctcc ttagagggga gcagggcttc 1380 actggctctg ccctttcttc tccagtgccc cccatggtga atgtcacccg cagtgaggcc 1440 tcagagggca acattaccgt gacatgcagg gcttctggct tctatccctg gaatatcaca 1500 ctgagctggc gtcaggatgg ggtatctttg agccacgaca cccagcagtg gggggatgtc 1560 ctgcctgatg ggaatggaac ctaccagacc tgggtggcca ccaggatttg ccaaggagag 1620 gagcagaggt tcacctgcta catggaacac agcgggaatc acagcactca ccctgtgccc 1680 tctggtgagc ctagggtgac cctggagagg gtcagaccag ggtagggaca gcagggatgg 1740 ctgtggctct ctgcccagtg tataacaagt cccttttttt tcagggaaag tgctggtgct 1800 tcagagtcat tggcagacat tccatgtttc tgctgttgct gctgctgcta tttttgttat 1860 tattattttc tatgtccgtt gttgtaagaa gaaaacatca gctgcagagg gtccag 1916 //