Dbfetch
ID AJ566211; SV 1; linear; genomic DNA; STD; HUM; 3341 BP.
XX
AC AJ566211;
XX
DT 11-JUN-2003 (Rel. 76, Created)
DT 17-JUN-2008 (Rel. 96, Last updated, Version 4)
XX
DE Homo sapiens HLA-B for MHC class I antigen precursor, HLA-B*4805 variant
DE allele, exons 1-7
XX
KW HLA-B gene; HLA-B*4805 variant allele; human leucocyte antigen B precursor;
KW major histocompatibility complex; MHC class I antigen.
XX
OS Homo sapiens (human)
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC Homo.
XX
RN [1]
RP 1-3341
RA Dunn P.P.;
RT ;
RL Submitted (09-JUN-2003) to the INSDC.
RL Dunn P.P., H & I DNA Reference Laboratory, National Blood Service,
RL Southmead Road, BS10 5ND, UNITED KINGDOM.
XX
RN [2]
RA Dunn P.P.J.;
RT "Complete nucleotide sequence of a HLA-A*4805 variant allele";
RL Unpublished.
XX
DR MD5; 491b5bc2fc9ce9cb290b9ccb4ee6e3ee.
DR EPD; EP73522; HS_HLA-B.
XX
FH Key Location/Qualifiers
FH
FT source 1..3341
FT /organism="Homo sapiens"
FT /mol_type="genomic DNA"
FT /db_xref="taxon:9606"
FT CDS join(303..375,504..773,1019..1294,1869..2144,2238..2354,
FT 2795..2827,2935..2978)
FT /gene="HLA-B"
FT /allele="HLA-B*4805 variant allele"
FT /product="MHC class I antigen precursor"
FT /function="antigen presenting molecule"
FT /db_xref="GOA:Q6KEQ1"
FT /db_xref="IMGT/HLA:B*48:08"
FT /db_xref="InterPro:IPR001039"
FT /db_xref="InterPro:IPR003006"
FT /db_xref="InterPro:IPR003597"
FT /db_xref="InterPro:IPR007110"
FT /db_xref="InterPro:IPR010579"
FT /db_xref="InterPro:IPR011161"
FT /db_xref="InterPro:IPR011162"
FT /db_xref="InterPro:IPR013783"
FT /db_xref="InterPro:IPR036179"
FT /db_xref="InterPro:IPR037055"
FT /db_xref="UniProtKB/TrEMBL:Q6KEQ1"
FT /protein_id="CAD92861.1"
FT /translation="MLVMAPRTVLLLLSAALALTETWAGSHSMRYFYTSVSRPGRGEPR
FT FISVGYVDDTQFVRFDSDAASPREEPRAPWIEQEGPEYWDRETQISKTNTQTYRESLRN
FT LRGYYNQSEAGSHTLQSMYGCDVGPDGRLLRGHDQYAYDGKDYIALNEDLRSWTAADTA
FT AQITQRKWEAAREAEQRRAYLEGECVEWLRRYLENGKDKLERADPPKTHVTHHPISDHE
FT ATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRY
FT TCHVQHEGLPKPLTLRWEPSSQSTVPIVGIVAGLAVLAVVVIGAVVAAVMCRRKSSGGK
FT GGSYSQAACSDSAQGSDVSLTA"
FT sig_peptide 303..375
FT /gene="HLA-B"
FT exon <303..375
FT /gene="HLA-B"
FT /allele="HLA-B*4805 variant allele"
FT /number=1
FT intron 376..503
FT /gene="HLA-B"
FT /allele="HLA-B*4805 variant allele"
FT /number=1
FT mat_peptide join(504..773,1019..1294,1869..2144,2238..2354,2795..2827,
FT 2935..2978)
FT /gene="HLA-B"
FT /product="MHC class I antigen"
FT exon 504..773
FT /gene="HLA-B"
FT /allele="HLA-B*4805 variant allele"
FT /number=2
FT intron 774..1018
FT /gene="HLA-B"
FT /allele="HLA-B*4805 variant allele"
FT /number=2
FT exon 1019..1294
FT /gene="HLA-B"
FT /allele="HLA-B*4805 variant allele"
FT /number=3
FT intron 1295..1868
FT /gene="HLA-B"
FT /allele="HLA-B*4805 variant allele"
FT /number=3
FT exon 1869..2144
FT /gene="HLA-B"
FT /allele="HLA-B*4805 variant allele"
FT /number=4
FT intron 2145..2237
FT /gene="HLA-B"
FT /allele="HLA-B*4805 variant allele"
FT /number=4
FT exon 2238..2354
FT /gene="HLA-B"
FT /allele="HLA-B*4805 variant allele"
FT /number=5
FT intron 2355..2794
FT /gene="HLA-B"
FT /allele="HLA-B*4805 variant allele"
FT /number=5
FT exon 2795..2827
FT /gene="HLA-B"
FT /allele="HLA-B*4805 variant allele"
FT /number=6
FT intron 2828..2934
FT /gene="HLA-B"
FT /allele="HLA-B*4805 variant allele"
FT /number=6
FT exon 2935..2978
FT /gene="HLA-B"
FT /allele="HLA-B*4805 variant allele"
FT /number=7
XX
SQ Sequence 3341 BP; 619 A; 963 C; 1055 G; 704 T; 0 other;
ttggtgtagg agaagaggga tcaggacgaa gtcccaggtc ccggacgggg ctctcagggt 60
ctcaggctcc gagggccgcg tctgcaatgg ggaggcgcag cgttggggat tccccactcc 120
cctgagtttc acttcttctc ccaacttgtg tcgggtcctt cttccaggat actcgtgacg 180
cgtccccact tcccactccc attgggtatt ggatatctag agaagccaat cagcgtcgcc 240
gcggtcccag ttctaaagtc cccacgcacc cacccggact cagagtctcc tcagacgccg 300
agatgctggt catggcgccc cgaaccgtcc tcctgctgct ctcggcggcc ctggccctga 360
ccgagacctg ggccggtgag tgcgggtcgg gagggaaatg gcctctgccg ggaggagcga 420
ggggaccgca ggcgggggcg caggacctga ggagccgcgc cgggaggagg gtcgggcggg 480
tctcagcccc tcctcacccc caggctccca ctccatgagg tatttctaca cctccgtgtc 540
ccggcccggc cgcggggagc cccgcttcat ctcagtgggc tacgtggacg acacccagtt 600
cgtgaggttc gacagcgacg ccgcgagtcc gagagaggag ccgcgggcgc cgtggataga 660
gcaggagggg ccggagtatt gggaccggga gacacagatc tccaagacca acacacagac 720
ttaccgagag agcctgcgga acctgcgcgg ctactacaac cagagcgagg ccggtgagtg 780
accccggccc ggggcgcagg tcacgactcc ccatccccca cgtacggccc gggtcgcccc 840
gagtctccgg gtccgagatc cgcctccctg aggccgcggg acccgcccag accctcgacc 900
ggcgagagcc ccaggcgcgt ttacccggtt tcattttcag ttgaggccaa aatccccgcg 960
ggttggtcgg ggcggggcgg ggctcggggg actgggctga ccgcggggcc ggggccaggg 1020
tctcacaccc tccagagcat gtacggctgc gacgtggggc cggacgggcg cctcctccgc 1080
gggcatgacc agtacgccta cgacggcaag gattacatcg ccctgaacga ggacctgcgc 1140
tcctggaccg ccgcggacac ggcggctcag atcacccagc gcaagtggga ggcggcccgt 1200
gaggcggagc agcggagagc ctacctggag ggcgagtgcg tggagtggct ccgcagatac 1260
ctggagaacg ggaaggacaa gctggagcgc gctggtacca ggggcagtgg ggagccttcc 1320
ccatctccta taggtcgccg gggatggcct cccacgagaa gaggaggaaa atgggatcag 1380
cgctagaatg tcgccctccg ttgaatggag aatggcatga gttttcctga gtttcctctg 1440
agggccccct cttctctcta gacaattaag gaatgacgtc tctgaggaaa tggaggggaa 1500
gacagtccct agaatactga tcaggggtcc cctttgaccc ctgcagcagc cttgggaacc 1560
gtgacttttc ctctcaggcc ttgttctctg cctcacactc agtgtgtttg gggctctgat 1620
tccagcactt ctgagtcact ttacctccac tcagatcagg agcagaagtc cctgttcccc 1680
gctcagagac tcgaactttc caatgaatag gagattatcc caggtgcctg cgtccaggct 1740
ggtgtctggg ttctgtgccc cttccccacc ccaggtgtcc tgtccattct caggctggtc 1800
acatgggtgg tcctagggtg tcccatgaaa gatgcaaagc gcctgaattt tctgactctt 1860
cccatcagac cccccaaaga cacacgtgac ccaccacccc atctctgacc atgaggccac 1920
cctgaggtgc tgggccctgg gtttctaccc tgcggagatc acactgacct ggcagcggga 1980
tggcgaggac caaactcagg acactgagct tgtggagacc agaccagcag gagatagaac 2040
cttccagaag tgggcagctg tggtggtgcc ttctggagaa gagcagagat acacatgcca 2100
tgtacagcat gaggggctgc cgaagcccct caccctgaga tggggtaagg agggggatga 2160
ggggtcatat ctcttctcag ggaaagcagg agcccttcag cagggtcagg gcccctcatc 2220
ttcccctcct ttcccagagc cgtcttccca gtccaccgtc cccatcgtgg gcattgttgc 2280
tggcctggct gtcctagcag ttgtggtcat cggagctgtg gtcgctgctg tgatgtgtag 2340
gaggaagagt tcaggtaggg aaggggtgag gggtggggtc tgggttttct tgtcccactg 2400
gggtttcaag ccccaggtag aagtgttccc tgcctcatta ctgggaagca gcatgcacac 2460
aggggctaac gcagcctggg accctgtgtg ccagcactta ctcttttgtg cagcacatgt 2520
gacaatgaag gatggatgta tcaccttgat ggttgtggtg ttggggtcct gattccagca 2580
ttcatgagtc aggggaaggt ccctgctaag gacagacctt aggagggcag ttggtccagg 2640
acccacactt gctttcctcg tgtttcctga tcctgccctg ggtctgtagt catacttctg 2700
gaaattcctt ttgggtccaa gactaggagg ttcctctaag atctcatggc cctgcttcct 2760
cccagtgccc tcacaggaca ttttcttccc acaggtggaa aaggagggag ctactctcag 2820
gctgcgtgta agtggtgggg gtgggagtgt ggaggagctc acccacccca taattcctcc 2880
tgtcccacgt ctcctgcggg ctcttgacca ggtcctgttt ttgttctact ccaggcagcg 2940
acagtgccca gggctctgat gtgtctctca cagcttgaaa aggtgagatt cttggggtct 3000
agagtgggtg gggtggcggg tctgggggtg ggtggggcag aggggaaagg cctgggtaat 3060
ggggattctt tgattgggat gtttcgcgtg tgtggtgggc tgtttagagt gtcatcgctt 3120
accatgacta accagaattt gttcatgact gttgttttct gtagcctgag acagctgtct 3180
tgtgagggac tgagatgcag gatttcttca cgcctcccct ttgtgacttc aagagcctct 3240
ggcatctctt tctgcaaagg cacctgaatg tgtctgcgtc cctgttagca taatgtgagg 3300
aggtggagag acagcccacc cttgtgtcca ctgtgacccc t 3341
//
