Dbfetch
ID AJ420240; SV 1; linear; genomic DNA; STD; HUM; 2862 BP.
XX
AC AJ420240;
XX
DT 18-NOV-2002 (Rel. 73, Created)
DT 17-JUN-2008 (Rel. 96, Last updated, Version 4)
XX
DE Homo sapiens HLA-B gene for MHC class I antigen, B*52011 allele, exons 1-7
XX
KW HLA-B gene; HLA-B*52011 allele; human leucocyte antigen B;
KW major histocompatibility complex; MHC class I antigen.
XX
OS Homo sapiens (human)
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC Homo.
XX
RN [1]
RP 1-2862
RA Cox S.T.;
RT ;
RL Submitted (16-NOV-2001) to the INSDC.
RL Cox S.T., Dept of HLA Sequencing, Anthony Nolan Research, The Royal Free
RL Hospital, Pond Street, Hampstead, London, NW3 2QG, UNITED KINGDOM.
XX
RN [2]
RA Cox S.T.;
RT "Full genomic sequence alignments for HLA-B and -C";
RL Unpublished.
XX
DR MD5; ec15902711ac269ef0af978459d0cc0c.
XX
FH Key Location/Qualifiers
FH
FT source 1..2862
FT /organism="Homo sapiens"
FT /chromosome="6"
FT /map="6p21.31"
FT /mol_type="genomic DNA"
FT /cell_line="E4181"
FT /db_xref="taxon:9606"
FT CDS join(302..374,504..773,1019..1294,1870..2145,2250..2366,
FT 2808..>2840)
FT /gene="HLA-B"
FT /product="MHC class I antigen"
FT /function="antigen presenting molecule"
FT /note="B*5201 allele"
FT /db_xref="GOA:Q8HWR0"
FT /db_xref="IMGT/HLA:B*52:01:01:01"
FT /db_xref="InterPro:IPR001039"
FT /db_xref="InterPro:IPR003006"
FT /db_xref="InterPro:IPR003597"
FT /db_xref="InterPro:IPR007110"
FT /db_xref="InterPro:IPR011161"
FT /db_xref="InterPro:IPR011162"
FT /db_xref="InterPro:IPR013783"
FT /db_xref="InterPro:IPR036179"
FT /db_xref="InterPro:IPR037055"
FT /db_xref="UniProtKB/TrEMBL:Q8HWR0"
FT /protein_id="CAD12425.1"
FT /translation="MRVTAPRTVLLLLWGAVALTETWAGSHSMRYFYTAMSRPGRGEPR
FT FIAVGYVDDTQFVRFDSDAASPRTEPRAPWIEQEGPEYWDRETQISKTNTQTYRENLRI
FT ALRYYNQSEAGSHTWQTMYGCDVGPDGRLLRGHNQYAYDGKDYIALNEDLSSWTAADTA
FT AQITQRKWEAAREAEQLRAYLEGLCVEWLRRHLENGKETLQRADPPKTHVTHHPVSDHE
FT ATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRY
FT TCHVQHEGLPKPLTLRWEPSSQSTIPIVGIVAGLAVLAVVVIGAVVATVMCRRKSSGGK
FT GGSYSQAA"
FT exon 302..374
FT /gene="HLA-B"
FT /number=1
FT /note="B*5201 allele"
FT intron 375..503
FT /gene="HLA-B"
FT /number=1
FT /note="B*5201 allele"
FT exon 504..773
FT /gene="HLA-B"
FT /number=2
FT /note="B*5201 allele"
FT intron 774..1018
FT /gene="HLA-B"
FT /number=2
FT /note="B*5201 allele"
FT exon 1019..1294
FT /gene="HLA-B"
FT /number=3
FT /note="B*5201 allele"
FT intron 1295..1869
FT /gene="HLA-B"
FT /number=3
FT /note="B*5201 allele"
FT exon 1870..2145
FT /gene="HLA-B"
FT /number=4
FT /note="B*5201 allele"
FT intron 2146..2249
FT /gene="HLA-B"
FT /number=4
FT /note="B*5201 allele"
FT exon 2250..2366
FT /gene="HLA-B"
FT /number=5
FT /note="B*5201 allele"
FT intron 2367..2807
FT /gene="HLA-B"
FT /number=5
FT /note="B*5201 allele"
FT exon 2808..2840
FT /gene="HLA-B"
FT /number=6
FT /note="B*5201 allele"
XX
SQ Sequence 2862 BP; 538 A; 850 C; 910 G; 564 T; 0 other;
tggtgtagga gaagagggat caggacgaag tcccaggccc cgggcggggc tctcagggtc 60
tcaggctccg agagccttgt ctgcattggg gaggcgcagc gttggggatt ccccactccc 120
acgagtttca cttcttctcc caacctatgt cgggtccttc ttccaggata ctcgtgacgc 180
gtccccattt cccactccca ttgggtgtcg gatatctaga gaagccaatc agtgtcgccg 240
gggtcccagt tctaaagtcc ccacgcaccc acccggactc agaatctcct cagacgccga 300
gatgcgggtc acggcgcccc gaaccgtcct cctgctgctc tggggggcag tggccctgac 360
cgagacctgg gccggtgagt gcggggtcgg gagggaaatg gcctctgtgg ggaggagcga 420
ggggaccgca ggcgggggcg caggacctga ggagccgcgc cgggaggagg gtcgggcggg 480
tctcagcccc tcctcgcccc caggctccca ctccatgagg tatttctaca ccgccatgtc 540
ccggcccggc cgcggggagc cccgcttcat cgcagtgggc tacgtggacg acacccagtt 600
cgtgaggttc gacagcgacg ccgcgagtcc gaggacggag ccccgggcgc catggataga 660
gcaggagggg ccggagtatt gggaccggga gacacagatc tccaagacca acacacagac 720
ttaccgagag aacctgcgga tcgcgctccg ctactacaac cagagcgagg ccggtgagtg 780
accccggccc ggggcgcagg tcacgactcc ccatccccca cgtacggccc gggtcgcccc 840
gagtctccgg gtccgagatc cgcctccctg aggccgcggg acccgcccag accctcgacc 900
ggcgagagcc ccaggcgcgt ttacccggtt tcattttcag ttgaggccaa aatccccgcg 960
ggttggtcgg ggcggggcgg ggctcggggg acggtgctga ccgcggggcc ggggccaggg 1020
tctcacactt ggcagacgat gtatggctgc gacgtggggc cggacgggcg cctcctccgc 1080
gggcataacc agtacgccta cgacggcaaa gattacatcg ccctgaacga ggacctgagc 1140
tcctggaccg cggcggacac cgcggctcag atcacccagc gcaagtggga ggcggcccgt 1200
gaggcggagc agctgagagc ctacctggag ggcctgtgcg tggagtggct ccgcagacac 1260
ctggagaacg ggaaggagac gctgcagcgc gcgggtacca ggggcagtgg ggagccttcc 1320
ccatctccta taggtcgccg gggatggcct cccacgagaa gaggaggaaa atgggatcag 1380
cgctagaatg tcgccctccc ttgaatggag aatggcatga gttttcctga gtttcctctg 1440
agggccccct cttctctcta ggacaattaa gggatgacgt ctctgaggaa atggagggga 1500
agacagtccc tagaatactg atcaggggtc ccctttgacc cctgcagcag ccttgggaac 1560
cgtgactttt cctctcaggc cttgttctct gcctcacact cagtgtgttt ggggctctga 1620
ttccagcact tctgagtcac tttacctcca ctcagatcag gagcagaagt ccctgttccc 1680
cgctcagaga ctcgaacttt ccaatgaata ggagattatc ccaggtgcct gcgtccaggc 1740
tggtgtctgg gttctgtgcc ccttccccac accaggtgtc ctgtccattc tcaggctggt 1800
cacatgggtg gtcctagggt gtcccatgag agatgcaaag cgcctgaatt ttctgactct 1860
tcccatcaga ccccccaaag acacacgtga cccaccaccc cgtctctgac catgaggcca 1920
ccctgaggtg ctgggccctg ggcttctacc ctgcggagat cacactgacc tggcagcggg 1980
atggcgagga ccaaactcag gacactgagc ttgtggagac cagaccagca ggagatagaa 2040
ccttccagaa gtgggcagct gtggtggtgc cttctggaga agagcagaga tacacatgcc 2100
atgtacagca tgaggggctg ccgaagcccc tcaccctgag atggggtaag gagggggatg 2160
aggggtcata tctcttctca gggaaagcag gagcccttct ggagcccttc agcagggtca 2220
gggcccctcg tcttcccctc ctttcccaga gccatcttcc cagtccacca tccccatcgt 2280
gggcattgtt gctggcctgg ctgtcctagc agttgtggtc atcggagctg tggtcgctac 2340
tgtgatgtgt aggaggaaga gctcaggtag ggaaggggtg aggggtgggg tctgggtttt 2400
cttgtcccac tgggggtttc aagccccagg tagaagtgtt ccctgcctca ttactgggaa 2460
gcagcatcca cacaggggct aacgcagcct gggaccctgt gtgccagcac ttactctttt 2520
gtgcagcaca tgtgacaatg aaggacggat gtatcacctt gatggttgtg gtgttggggt 2580
cctgatttca gcattcatga gtcaggggaa ggtccctgct aaggacagac cttaggaggg 2640
cagttggtcc aggacccaca cttgctttcc tcgtgtttcc tgatcctgcc ttgggtctgt 2700
agtcatactt ctggaaattc cttttgggtc caagacgagg aggttcctct aagatctcat 2760
ggccctgctt cctcccagtc ccctcacagg acattttctt cccacaggtg gaaaaggagg 2820
gagctactct caggctgcgt gtaagtggtg ggggtgggag tg 2862
//
