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EBI Dbfetch

ID   AJ308399; SV 1; linear; genomic DNA; STD; HUM; 2902 BP.
XX
AC   AJ308399;
XX
DT   01-MAR-2001 (Rel. 66, Created)
DT   17-JUN-2008 (Rel. 96, Last updated, Version 4)
XX
DE   Homo sapiens HLA-B gene for MHC class I antigen, B*15011new allele, exons
DE   1-7
XX
KW   HLA-B gene; human leucocyte antigen B; major histocompatibility complex;
KW   MHC class I antigen.
XX
OS   Homo sapiens (human)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC   Homo.
XX
RN   [1]
RP   1-2902
RA   Cox S.T.;
RT   ;
RL   Submitted (26-JAN-2001) to the INSDC.
RL   Cox S.T., Dept of HLA Sequencing, Anthony Nolan Research, The Royal Free
RL   Hospital, Pond Street, Hampstead, London, NW3 2QG, UNITED KINGDOM.
XX
RN   [2]
RA   Cox S.T.;
RT   "Sequence of HLA-B*15XX";
RL   Unpublished.
XX
DR   MD5; 7cbae9aabee4b810613d5eec89879b4e.
DR   Ensembl-Gn; ENSG00000232126; homo_sapiens.
DR   Ensembl-Tr; ENST00000450871; homo_sapiens.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2902
FT                   /organism="Homo sapiens"
FT                   /chromosome="6"
FT                   /map="6p21.31"
FT                   /mol_type="genomic DNA"
FT                   /tissue_type="blood"
FT                   /db_xref="taxon:9606"
FT   mRNA            join(<1..73,203..472,718..993,1569..1844,1949..2065,
FT                   2507..2539,2646..>2689)
FT                   /gene="HLA-B"
FT                   /note="B*1511new allele"
FT   CDS             join(1..73,203..472,718..993,1569..1844,1949..2065,
FT                   2507..2539,2646..2689)
FT                   /gene="HLA-B"
FT                   /product="MHC class I antigen"
FT                   /function="antigen presentation"
FT                   /note="B*1511new allele"
FT                   /db_xref="GOA:P30464"
FT                   /db_xref="HGNC:HGNC:4932"
FT                   /db_xref="IMGT/HLA:B*15:66"
FT                   /db_xref="InterPro:IPR001039"
FT                   /db_xref="InterPro:IPR003006"
FT                   /db_xref="InterPro:IPR003597"
FT                   /db_xref="InterPro:IPR007110"
FT                   /db_xref="InterPro:IPR010579"
FT                   /db_xref="InterPro:IPR011161"
FT                   /db_xref="InterPro:IPR011162"
FT                   /db_xref="InterPro:IPR013783"
FT                   /db_xref="InterPro:IPR027648"
FT                   /db_xref="PDB:1XR8"
FT                   /db_xref="PDB:1XR9"
FT                   /db_xref="PDB:3C9N"
FT                   /db_xref="UniProtKB/Swiss-Prot:P30464"
FT                   /protein_id="CAC33441.1"
FT                   /translation="MRVTAPRTVLLLLSGALALTETWAGSHSMRYFYTAMSRPGRGEPR
FT                   FIAVGYVDDTQFVRFDSDAASPRMAPRAPWIEQEGPEYWDRETQICKTNTQTYRESLRN
FT                   LRGYYNQSEAGSHTLQRMYGCDVGPDGRLLRGHDQSAYDGKDYIALNEDLSSWTAADTA
FT                   AQITQRKWEAAREAEQWRAYLEGLCVEWLRRYLENGKETLQRADPPKTHVTHHPISDHE
FT                   ATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRY
FT                   TCHVQHEGLPKPLTLRWEPSSQSTIPIVGIVAGLAVLAVVVIGAVVATVMCRRKSSGGK
FT                   GGSYSQAASSDSAQGSDVSLTA"
FT   exon            <1..73
FT                   /gene="HLA-B"
FT                   /number=1
FT                   /note="B*1511new allele"
FT   intron          74..202
FT                   /gene="HLA-B"
FT                   /number=1
FT                   /note="B*1511new allele"
FT   exon            203..472
FT                   /gene="HLA-B"
FT                   /number=2
FT                   /note="B*1511new allele"
FT   intron          473..717
FT                   /gene="HLA-B"
FT                   /number=2
FT                   /note="B*1511new allele"
FT   exon            718..993
FT                   /gene="HLA-B"
FT                   /number=3
FT                   /note="B*1511new allele"
FT   intron          994..1568
FT                   /gene="HLA-B"
FT                   /number=3
FT                   /note="B*1511new allele"
FT   exon            1569..1844
FT                   /gene="HLA-B"
FT                   /number=4
FT                   /note="B*1511new allele"
FT   intron          1845..1948
FT                   /gene="HLA-B"
FT                   /number=4
FT                   /note="B*1511new allele"
FT   exon            1949..2065
FT                   /gene="HLA-B"
FT                   /number=5
FT                   /note="B*1511new allele"
FT   intron          2066..2506
FT                   /gene="HLA-B"
FT                   /number=5
FT                   /note="B*1511new allele"
FT   exon            2507..2539
FT                   /gene="HLA-B"
FT                   /number=6
FT                   /note="B*1511new allele"
FT   intron          2540..2645
FT                   /gene="HLA-B"
FT                   /number=6
FT                   /note="B*1511new allele"
FT   exon            2646..>2689
FT                   /gene="HLA-B"
FT                   /number=7
FT                   /note="B*1511new allele"
XX
SQ   Sequence 2902 BP; 536 A; 832 C; 938 G; 596 T; 0 other;
     atgcgggtca cggcgccccg aaccgtcctc ctgctgctct cgggagccct ggccctgacc        60
     gagacctggg ccggtgagtg cggggtcggc agggaaatgg cctctgtggg gaggagcgag       120
     gggaccgcag gcgggggcgc aggacccggg gagccgcgcc gggaggaggg tcgggcgggt       180
     ctcagcccct cctcgccccc aggctcccac tccatgaggt atttctacac cgccatgtcc       240
     cggcccggcc gcggggagcc ccgcttcatc gcagtgggct acgtggacga cacccagttc       300
     gtgaggttcg acagcgacgc cgcgagtccg aggatggcgc cccgggcgcc atggatagag       360
     caggaggggc cggagtattg ggaccgggag acacagatct gcaagaccaa cacacagact       420
     taccgagaga gcctgcggaa cctgcgcggc tactacaacc agagcgaggc cggtgagtga       480
     ccccggcctg gggcgcaggt cacgactccc catcccccac gtacggcccg ggtcgccccg       540
     agtctccggg tccgagatcc gcccccctga ggccgcggga cccgcccaaa ccctcgaccg       600
     gcgagagccc caggcgcgtt tacccggttt cattttcagt tgaggccaaa atccccgcgg       660
     gttggtcggg gcggggcggg gctcggggga cggggctgac cgcggggcct gggccagggt       720
     ctcacaccct ccagaggatg tacggctgcg acgtggggcc ggacgggcgc ctcctccgcg       780
     ggcatgacca gtccgcctac gacggcaagg attacatcgc cctgaacgag gacctgagct       840
     cctggaccgc ggcggacacg gcggctcaga tcacccagcg caagtgggag gcggcccgtg       900
     aggcggagca gtggagagcc tacctggagg gcctgtgcgt ggagtggctc cgcagatacc       960
     tggagaacgg gaaggagacg ctgcagcgcg cgggtaccag gggcagtggg gagccttccc      1020
     catctcctat aggtcgccgg ggatggcctc ccacgagaag aggaggaaaa tgggatcagc      1080
     gctagaatgt cgccctccct tgaatggaga atggcatgag ttttcctgag tttcctctga      1140
     gggccccctc ttctctctag gacaattaag ggatgacgtc tctgaggaaa tggaggggaa      1200
     gacagtccct aggatagtga tcaggggtcc cctttgaccc ctgcagcagc cttgggaacc      1260
     gtgacttttc ctctcaggcc ttgttctctg cctcacactc agtgtgtttg gggctctgat      1320
     tccagcactt ctgagtcact ttacctccac tcagatcagg agcagaagtc cctgttcccc      1380
     gctcagagac tcgaactttc caatgaatag gagattatcc caggtgcctg cgtccaggct      1440
     ggtgtatggg ttctgtgccc cttccccacc ccaggtgtcc tgtccattct caggctggtc      1500
     acatgggtgg tcctagggtg tcccatgaga gatgcaaagc gcctgaattt tctgactctt      1560
     cccatcagac cccccaaaga cacatgtgac ccaccacccc atctctgacc atgaggccac      1620
     cctgaggtgc tgggccctgg gcttctaccc tgcggagatc acactgacct ggcagcggga      1680
     tggcgaggac caaactcagg acaccgagct tgtggagacc agaccagcag gagatagaac      1740
     cttccagaag tgggcagctg tggtggtgcc ttctggagaa gagcagagat acacatgcca      1800
     tgtacagcat gaggggctgc cgaagcccct caccctgaga tggggtaagg agggggatga      1860
     ggggtcatat ctgttctcag ggaaagcagg agcccttctg gagcccttca gcagggtcag      1920
     ggcccctcat cttcccctcc tttcccagag ccatcttccc agtccaccat ccccatcgtg      1980
     ggcattgttg ctggcctggc tgtcctagca gttgtggtca tcggagctgt ggtcgctact      2040
     gtgatgtgta ggaggaagag ctcaggtagg gaaggggtga ggggtggggt ctgggttttc      2100
     ttgtcccact gggggtttca agccccaggt agaagtgttc cctgcctcat tactgggaag      2160
     cagcatccac acaggggcta acgcagcctg ggaccctgtg tgccagcact tactcttttg      2220
     tgcagcacat gtgacaatga aggacagatg tatcgccttg atggttgtgg tgttggggtc      2280
     ctgattccag cattcatgag tcaggggaag gtccctgcta aggacagacc ttaggagggc      2340
     agttggtcca ggacccacac ttgctttcct cgtgtttcct gatcctgccc tgggtctgta      2400
     gtcatacttc tggaaattcc ttttggttcc aagacgagga ggttcctcta agatctcatg      2460
     gtcctgcttc ctcccagtcc cctcacagga cattttcttc ccacaggtgg aaaaggaggg      2520
     agctactctc aggctgcgtg taagtggtgg gggtgggagt gtggaggagc tcacccaccc      2580
     cataattcct cctgtcccac gtctcctgcg ggctctgacc aggtcctgtt tttgttctac      2640
     tccagccagc gacagtgccc agggctctga tgtgtctctc acagcttgaa aaggtgagat      2700
     tcttggggtc tagagtgggt ggggtggcgg gtctgggggt gggtggggca gtggggaaag      2760
     gcctgggtaa tggagattct ttgattggga tgtttcgcgt gtgtcgtggg ctgttcagag      2820
     tgtcatcact taccatgact aaccagaatt tgttcatgac tgttgttttc tgtagcctga      2880
     gacagctgtc ttgtgaggga cc                                               2902
//


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