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EBI Dbfetch

ID   AF523299; SV 1; linear; genomic DNA; STD; HUM; 5587 BP.
XX
AC   AF523299;
XX
DT   03-JUL-2002 (Rel. 72, Created)
DT   17-JUN-2008 (Rel. 96, Last updated, Version 3)
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DE   Homo sapiens clone LBF nonfunctional MHC class Ib antigen (HLA-G) gene,
DE   HLA-G*0105N allele, complete sequence.
XX
KW   .
XX
OS   Homo sapiens (human)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC   Homo.
XX
RN   [1]
RP   1-5587
RX   DOI; 10.1007/s00251-005-0076-z.
RX   PUBMED; 16570139.
RA   Pyo C.W., Williams L.M., Moore Y., Hyodo H., Li S.S., Zhao L.P.,
RA   Sageshima N., Ishitani A., Geraghty D.E.;
RT   "HLA-E, HLA-F, and HLA-G polymorphism: genomic sequence defines haplotype
RT   structure and variation spanning the nonclassical class I genes";
RL   Immunogenetics 58(4):241-251(2006).
XX
RN   [2]
RP   1-5587
RA   Ishitani A., Miki A., Williams L.M., Moore Y., Geraghty D.E.;
RT   ;
RL   Submitted (21-JUN-2002) to the INSDC.
RL   Clinical Division, Fred Hutchinson Cancer Research Center, 1100 Fairview
RL   Ave. N., D4-100, Seattle, WA 98109-1024, USA
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DR   MD5; 848449cb7c627239c866de84f2d897d5.
DR   IMGT/HLA; G*01:05N; HLA00952.
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FH   Key             Location/Qualifiers
FH
FT   source          1..5587
FT                   /organism="Homo sapiens"
FT                   /chromosome="6"
FT                   /mol_type="genomic DNA"
FT                   /clone="LBF"
FT                   /db_xref="taxon:9606"
FT   gene            <1202..>4127
FT                   /gene="HLA-G"
FT                   /allele="HLA-G*0105N"
FT   mRNA            join(<1202..1274,1404..1673,1900..2174,2774..3049,
FT                   3172..3288,3734..3765,4123..>4127)
FT                   /gene="HLA-G"
FT                   /allele="HLA-G*0105N"
FT                   /product="MHC class Ib antigen"
FT   misc_feature    join(1202..1274,1404..1673,1900..2174,2774..3049,
FT                   3172..3288,3734..3765)
FT                   /gene="HLA-G"
FT                   /allele="HLA-G*0105N"
FT                   /note="nonfunctional null allele without transmembrane
FT                   domain"
XX
SQ   Sequence 5587 BP; 1240 A; 1442 C; 1527 G; 1373 T; 5 other;
     gaggaaagaa ttccaaagca gcagaactct taggtttaaa cacattgttt tatagatttt        60
     aatacatcca tctacagagc ctcgctgggt gttctttgca gttggccttt aatatcttat       120
     gtgggtctgc ctagaaacta attgtttttt atgttaatca ggtttaaaaa atactaagta       180
     ttcctaaaaa atatacactc cactcacatg tggatacttc ctaaaaacag gcagtgcatg       240
     agcactagtg aggggcattg tgactgcact gaacacttac aactgtgagg tgaataaagt       300
     ttgtgctggc tcctggttgc aacatatagt aacatagtgt ggtactttgt cttgaggaga       360
     tgtcctggac tcacacggaa acttagggct acggaatgaa ggtaaattta aaataaaaca       420
     agcgggagtc acagatacat tgtctgggaa agtgaaactt aagagctttg tgagtcctgt       480
     tgtaaggctt ttagatgcat ttatatacca acgggccaaa gtcacatttt ttacctatta       540
     gattcctgat cattcagggg ttaccaagat tatgctaccc actatagtta ataaacaaaa       600
     agcaaactgg tctctattct atctcatgca ctcaggcaca acttttccag atttaagggg       660
     gaaaaaaaac cctgtcttta cacctacaat cccagggcga gctcactctc tggcaccaag       720
     ctccgtgggg tgatttttct tctagaagag tacaggagga caggcaagga gtgggaggca       780
     gggagtccag ttcagggaca gggattccgg gatgaaaagt gaagggagag ggacagggac       840
     cttgccgagg gtttctccct ggtttctcag acagctcctg ggccaagact cagggagaca       900
     ctgagacaga acgcttggca caagagtagc ggggtcaggg cgaagtccca gggcctcaag       960
     cgtggctctc agggtctcag gccccacagg cggtgtatgg attggggagg ccccgcgttg      1020
     gggattctct cctccttctc ctaacctgtg tcgggtcctt cttcctggat actcaccggg      1080
     cggccccagt tctcactccc attaggtgac aggtttttag agaagccaat cagcgtcgcc      1140
     gcggtcctgg ttctaaagtc ctcgctcacc cacccggact cattctcccc agacgccaag      1200
     gatggtggtc atggcacccc gaaccctctt cctgctactc tcgggggccc tgaccctgac      1260
     cgagacctgg gcgggtgagt gcggggtcag gagggaaacg gcccctgcgc ggaggaggga      1320
     ggggccggcc cggcgggggc gcaggacccg gcagccgcgc cgggaggagg gtcgggcggg      1380
     tctcaacctc tcctcgcccc caggctccca ctccatgagg tatttcagcg ccgccgtgtc      1440
     ccggcccggc cgcggggagc cccgcttcat cgccatgggc tacgtggacg acacgcagtt      1500
     cgtgcggttc gacagcgact cggcgtgtcc gaggatggag ccgcgggcgc cgtgggtgga      1560
     gcaggagggg ccagagtatt gggaagagga gacacggaac accaaggccc acgcacagac      1620
     tgacagaatg aacctgcaga ccctgcgcgg ctactacaac cagagcgagg ccagtgagta      1680
     accccggccc agggcgcaga tcacgacccc ccacctccat gccccacgga cgccccgggt      1740
     actcccgagt ctccgggtct gggatccacc ccgaggccgc gggacccgcc cagaccctct      1800
     acctgggaga accccaggcg cctttaccaa aatccctgcg ggtgggtccg ggcgagggcg      1860
     aggctcggtg ggcggggctg accgaagggg tggggccagg ttctcatacc ctccagtgga      1920
     tgattggctg cgacctgggg tccgacggac gcctcctccg cgggtatgaa cagtatgcct      1980
     acgatggcaa ggattacctc gccctgaacg aggactgcgc tcctggaccg cagcggacac      2040
     tgcggctcag atctccaagc gcaagtgtga ggcggccaat gtggctgaac aaaggagagc      2100
     ctacctggag ggcacgtgcg tggagtggct ccacagatac ctggagaacg ggaaggagat      2160
     gctgcagcgc gcgggtacca ggggcagtgg ggcgcctccc tgatctcctg tagacctccc      2220
     agcctggcct agcacaagga gaggaggaaa atgggaccaa caccagaata tcgccctccc      2280
     tctggtcctg agggagagga atcctcctgg gtttccagat cctgtaccag agagtgattc      2340
     tgagggcccg tcctgctctc tgggacaatt aagggatgaa gtctctgagg gagtggaggg      2400
     gaagacaatc cctggaggac tgatcagggg ttccctttga ccccacagca gccttggcac      2460
     caggactttt cccctcaggc cttgttctct gcctcacact caatgtgtgt gggagtctga      2520
     ctccagctcc tctgagtccc ttggcctcca ctcaggtcag aaccagaggt ccctgctccc      2580
     ccgctcagag actagaactt tccaaggaat aggagattat cccaggtgcc cgtgtccagg      2640
     ctggtgtctg ggttctgtgc tcccttcccc accccaggta tctggttcat tcttaggatg      2700
     gtcacatcca ggtgctgctg gagtgtccca tgagagatgc aaagtgcttg agttttctga      2760
     ctcttccttt cagacccccc caagacacac gtgacccacc accctgtctt tgactatgag      2820
     gccaccctga ggtgctgggc cctgggcttc taccctgcgg agatcatact gacctggcag      2880
     cgggatgggg aggaccagac ccaggacgtg gagctcgtgg agaccaggcc tgcaggggat      2940
     ggaaccttcc agaagtgggc agctgtggtg gtgccttctg gagaggagca gagatacacg      3000
     tgccatgtgc agcatgaggg gctgccggag cccctcatgc tgagatggag taaggaggga      3060
     gatggaggca tcatgtctgt tagggaaagc aggagcctct ctgaagacct ttaacagggt      3120
     cggtggtgag gcctgggggt cagagaccct caccttcacc tcctttccca gagcagtctt      3180
     ccctgcccac catccccatc atgggtatcg ttgctggtct ggttgtcctt gcagctgtag      3240
     tcactggagc tgcggtcgct gctgtgctgt ggaggaagaa gagctcaggt aaggaagggg      3300
     tgacaagtgg ggtctgagtt ttcttgtccc actgggggtt tcaagcccca ggtagaagtg      3360
     cgccctgcct ggttactggg aagcaccatc cacactcatg ggcctaccca gcctgggccc      3420
     tgtgtgccag caccttctct tttgtaaagc acctgtgaca atgaaggaca gatttatcac      3480
     cttgatgatt gtagtgatgg ggacctgatc ctagtaatca caggtcaggg gaaggtccct      3540
     ggctaaggac agaccttagg agggcagttg gtcgaggacc cacatctgct ttccttgttt      3600
     ttcctgatcc cgccctgagt ctgcagtcac acatttctgg aaacttctcg agggtccaag      3660
     actaggaggt tcctctagga cctcatggcc ctgccacctt tctggcctct cacaggacgt      3720
     tttcttccca cagattgaaa aggagggagc tactctcagg ctgcaagtaa gtatgaagga      3780
     ggctgatccc tgagatcctt gggatcttgt gtttgggagc ccatggggga gctcacccac      3840
     cccacaattc ctcctctggc cacatctcct gtggtctctg accaggtgct gtttttgttc      3900
     tactctaggc agtgacagtg cccagggctc taatgtgtct ctcacggctt gtaaatgtga      3960
     caccccgggg ggcctgatgt gtgtgggttg ttgagggaaa cagtggacat agctgtgcta      4020
     tgaggtttct ttgacttgaa tgtattgagc atgtgatggg ctgtttaaag tgtcacccct      4080
     cactgtgact gatatgaatt tgttcatgaa tatttttctg tagtgtgaaa cagctgccct      4140
     gtgtgggact gagtggcaag atttgttcat gccttccctt tgtgacttca agaaccctga      4200
     cttctctttc tgcagagacc agcccacccc tgtgcccacc atgaccctct tcctcatgct      4260
     gaactgcatt ccttccccaa tcacctttcc tgttccagaa aaggggctgg gatgtctccg      4320
     tctctgtctc aaatttgtgg tgcactgagc tataacttac ttctgtatta aaattagaat      4380
     ctgagtataa atttagtttt tcaaattatt tccaagagag attgatgggt taattaaagg      4440
     agaagattcc tgaaatttga gagacaaaat aaatggaaga catgagaact ttccacagta      4500
     cacgtgtttc ttgtgctgat ttgttgcagg agaggagagt agatggggct gcgcccagtg      4560
     ggtgctcagg ccaccatgaa ctttatgtgg tcactgctca gctgggtcat ctttgctgct      4620
     ccattgtcct tggcccttca gtagaacctt gtcccaccag gacctgtgat cacatagact      4680
     tggatatcac ctagggtggt ccctacactt agaagttcct gtgttatcag aagaaaaatt      4740
     ttcagacccc tacacctctt cccctccttc caggtctctt tcaattgtat tttccatctt      4800
     tttttttttt ttnnnnnttt tttttttttt ttttttgaga tggagtctca ctcaggctgg      4860
     agtgcagtgg tgcaatctca actcattgca acctccacct cccgggttca agcaattctc      4920
     ctgtctcagc ctccctagta actgggagta caggcacatg ccacaatacc cagctaattt      4980
     tttgtatttt tagtaaagac gggatttcac catgttagcc aggatggtct tgatctcctg      5040
     accttgtgat ctgcccgcct ctgcctccca aagtgctggg attacaggtg taagccacca      5100
     tgcctggctt ccccaacctt cttaaaggaa gcagattctg aaacttcccg agaggagagg      5160
     tcccagagtt tttcattgta gtttactttc tgttggaact cctcttctgc tctctctcct      5220
     actcttcttc ctgccctgag ttgtagtaat cctattgctg gctccaaacc aaactcatgg      5280
     atttgtaaag cagagtctaa tttagattca tatgtggttg gataattgga gccataagcc      5340
     ttgggttatc tttcctcaag agacaaatat ggttgtgtgc tgcagtgtgc aggaggattg      5400
     gtgtgggagg agggagggag ggaggacaca aaagcagccc tggtgagaaa agcactggtg      5460
     catttatatc cacatgagat aatattgttc cacagcggct acaaaatgac atttggcctg      5520
     agtctacatt aataaagata ttgcctttag aatagggggg cgcactacag taatcatcca      5580
     ttcaagt                                                                5587
//


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