Dbfetch

ID   AF481359; SV 1; linear; genomic DNA; STD; HUM; 226 BP.
XX
AC   AF481359;
XX
DT   17-JAN-2003 (Rel. 74, Created)
DT   17-JUN-2008 (Rel. 96, Last updated, Version 2)
XX
DE   Homo sapiens HLA-DR alpha (HLA-DRA) gene, HLA-DRA*0102 allele, partial cds.
XX
KW   .
XX
OS   Homo sapiens (human)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC   Homo.
XX
RN   [1]
RP   1-226
RX   DOI; 10.1034/j.1399-0039.2002.600310.x.
RX   PUBMED; 12445311.
RA   Kralovicova J., Marsh S.G., Waller M.J., Hammarstrom L., Vorechovsky I.;
RT   "The HLA-DRA*0102 allele: correct nucleotide sequence and associated HLA
RT   haplotypes";
RL   Tissue Antigens 60(3):266-267(2002).
XX
RN   [2]
RP   1-226
RA   Kralovicova J., Vorechovsky I.;
RT   ;
RL   Submitted (06-FEB-2002) to the INSDC.
RL   Department of Biosciences at NOVUM, Karolinska Institute, Blickag. 6,
RL   Huddinge 14157, Sweden
XX
DR   MD5; af2ceb6e3d2fa165baf39949bc57ef5b.
DR   Ensembl-Gn; ENSG00000204287; homo_sapiens.
DR   Ensembl-Gn; ENSG00000206308; homo_sapiens.
DR   Ensembl-Gn; ENSG00000226260; homo_sapiens.
DR   Ensembl-Gn; ENSG00000227993; homo_sapiens.
DR   Ensembl-Gn; ENSG00000228987; homo_sapiens.
DR   Ensembl-Gn; ENSG00000230726; homo_sapiens.
DR   Ensembl-Gn; ENSG00000234794; homo_sapiens.
DR   Ensembl-Tr; ENST00000383127; homo_sapiens.
DR   Ensembl-Tr; ENST00000383259; homo_sapiens.
DR   Ensembl-Tr; ENST00000395388; homo_sapiens.
DR   Ensembl-Tr; ENST00000411524; homo_sapiens.
DR   Ensembl-Tr; ENST00000414698; homo_sapiens.
DR   Ensembl-Tr; ENST00000416883; homo_sapiens.
DR   Ensembl-Tr; ENST00000442960; homo_sapiens.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..226
FT                   /organism="Homo sapiens"
FT                   /chromosome="6"
FT                   /map="6p21.3"
FT                   /mol_type="genomic DNA"
FT                   /tissue_type="blood"
FT                   /note="found in separate individuals (n>30); obtained from
FT                   carriers of the following HLA haplotypes: HLA-B*0801,
FT                   DRB1*03011, DQB1*0201 (AH8.1), HLA-B*07021, DRB1*15011,
FT                   DQB1*0602 (AH7.1), HLA-B8*1501, DRB1*15011, DQB1*0302,
FT                   HLA-B*1501, DRB1*1402, DQB1*03011 and HLA-A3, B*07021,
FT                   DRB1*1301, DQB1*0603"
FT                   /db_xref="taxon:9606"
FT   mRNA            <48..>200
FT                   /gene="HLA-DRA"
FT   CDS             <48..200
FT                   /codon_start=1
FT                   /gene="HLA-DRA"
FT                   /product="HLA-DR alpha"
FT                   /note="transmembrane glycoprotein"
FT                   /db_xref="GOA:P01903"
FT                   /db_xref="HGNC:HGNC:4947"
FT                   /db_xref="IMGT/HLA:DRA*01:02:01"
FT                   /db_xref="InterPro:IPR001003"
FT                   /db_xref="InterPro:IPR003006"
FT                   /db_xref="InterPro:IPR003597"
FT                   /db_xref="InterPro:IPR007110"
FT                   /db_xref="InterPro:IPR011162"
FT                   /db_xref="InterPro:IPR013783"
FT                   /db_xref="InterPro:IPR014745"
FT                   /db_xref="PDB:1A6A"
FT                   /db_xref="PDB:1AQD"
FT                   /db_xref="PDB:1BX2"
FT                   /db_xref="PDB:1D5M"
FT                   /db_xref="PDB:1D5X"
FT                   /db_xref="PDB:1D5Z"
FT                   /db_xref="PDB:1D6E"
FT                   /db_xref="PDB:1DLH"
FT                   /db_xref="PDB:1FV1"
FT                   /db_xref="PDB:1FYT"
FT                   /db_xref="PDB:1H15"
FT                   /db_xref="PDB:1HQR"
FT                   /db_xref="PDB:1HXY"
FT                   /db_xref="PDB:1J8H"
FT                   /db_xref="PDB:1JWM"
FT                   /db_xref="PDB:1JWS"
FT                   /db_xref="PDB:1JWU"
FT                   /db_xref="PDB:1KG0"
FT                   /db_xref="PDB:1KLG"
FT                   /db_xref="PDB:1KLU"
FT                   /db_xref="PDB:1LO5"
FT                   /db_xref="PDB:1PYW"
FT                   /db_xref="PDB:1R5I"
FT                   /db_xref="PDB:1SEB"
FT                   /db_xref="PDB:1SJE"
FT                   /db_xref="PDB:1SJH"
FT                   /db_xref="PDB:1T5W"
FT                   /db_xref="PDB:1T5X"
FT                   /db_xref="PDB:1YMM"
FT                   /db_xref="PDB:1ZGL"
FT                   /db_xref="PDB:2FSE"
FT                   /db_xref="PDB:2G9H"
FT                   /db_xref="PDB:2IAM"
FT                   /db_xref="PDB:2IAN"
FT                   /db_xref="PDB:2ICW"
FT                   /db_xref="PDB:2IPK"
FT                   /db_xref="PDB:2OJE"
FT                   /db_xref="PDB:2Q6W"
FT                   /db_xref="PDB:2SEB"
FT                   /db_xref="PDB:2WBJ"
FT                   /db_xref="PDB:2XN9"
FT                   /db_xref="PDB:3C5J"
FT                   /db_xref="PDB:3L6F"
FT                   /db_xref="PDB:3O6F"
FT                   /db_xref="PDB:3PDO"
FT                   /db_xref="PDB:3PGC"
FT                   /db_xref="PDB:3PGD"
FT                   /db_xref="PDB:3QXA"
FT                   /db_xref="PDB:3QXD"
FT                   /db_xref="PDB:3S4S"
FT                   /db_xref="PDB:3S5L"
FT                   /db_xref="PDB:3T0E"
FT                   /db_xref="PDB:4AEN"
FT                   /db_xref="PDB:4AH2"
FT                   /db_xref="PDB:4C56"
FT                   /db_xref="PDB:4E41"
FT                   /db_xref="PDB:4FQX"
FT                   /db_xref="PDB:4GBX"
FT                   /db_xref="PDB:4H1L"
FT                   /db_xref="PDB:4H25"
FT                   /db_xref="PDB:4H26"
FT                   /db_xref="PDB:4I5B"
FT                   /db_xref="PDB:4IS6"
FT                   /db_xref="PDB:4MCY"
FT                   /db_xref="PDB:4MCZ"
FT                   /db_xref="PDB:4MD0"
FT                   /db_xref="PDB:4MD4"
FT                   /db_xref="PDB:4MD5"
FT                   /db_xref="PDB:4MDI"
FT                   /db_xref="PDB:4MDJ"
FT                   /db_xref="PDB:4OV5"
FT                   /db_xref="PDB:4X5W"
FT                   /db_xref="PDB:4X5X"
FT                   /db_xref="PDB:4Y19"
FT                   /db_xref="PDB:4Y1A"
FT                   /db_xref="PDB:5JLZ"
FT                   /db_xref="PDB:5LAX"
FT                   /db_xref="UniProtKB/Swiss-Prot:P01903"
FT                   /protein_id="AAO23887.1"
FT                   /translation="FDAPSPLPETTENVVCALGLTVGLVGIIIGTIFIIKGLRKSNAAE
FT                   RRGPL"
FT   exon            48..>200
FT                   /gene="HLA-DRA"
XX
SQ   Sequence 226 BP; 49 A; 59 C; 62 G; 56 T; 0 other;
     tcttcccaca ctcattacca tgtactctgc cttatttccc cccagagttt gatgctccaa        60
     gccctctccc agagactaca gagaacgtgg tgtgtgccct gggcctgact gtgggtctgg       120
     tgggcatcat tattgggacc atcttcatca tcaagggatt gcgcaaaagc aatgcagcag       180
     aacgcagggg gcctctgtaa ggcacatgga ggtgagttag gtgtgg                      226
//