Dbfetch

Dbfetch

ID   AF419295; SV 1; linear; genomic DNA; STD; HUM; 276 BP.
XX
AC   AF419295;
XX
DT   27-SEP-2001 (Rel. 69, Created)
DT   17-JUN-2008 (Rel. 96, Last updated, Version 4)
XX
DE   Homo sapiens MHC class I antigen (HLA-B) gene, HLA-B*44 new allele, exon 4
DE   and partial cds.
XX
KW   .
XX
OS   Homo sapiens (human)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC   Homo.
XX
RN   [1]
RP   1-276
RA   Smith A.G., McKinney S., Hansen J.A.;
RT   "Novel HLA B*44 allele";
RL   Unpublished.
XX
RN   [2]
RP   1-276
RA   Smith A.G., McKinney S., Hansen J.A.;
RT   ;
RL   Submitted (14-SEP-2001) to the INSDC.
RL   Clinical Immunogenetics Lab, Seattle Cancer Care Alliance, 825 Eastlake
RL   Ave. E., Seattle, WA 98109, USA
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DR   IMGT/HLA; HLA01489; B*44:27:01.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..276
FT                   /organism="Homo sapiens"
FT                   /chromosome="6"
FT                   /map="6p21"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:9606"
FT   mRNA            join(AF419293.1:<1..270,AF419294.1:1..276,1..>276)
FT                   /gene="HLA-B"
FT                   /product="MHC class I antigen"
FT   CDS             join(AF419293.1:<1..270,AF419294.1:1..276,1..>276)
FT                   /codon_start=3
FT                   /gene="HLA-B"
FT                   /product="MHC class I antigen"
FT                   /db_xref="GOA:Q95IB6"
FT                   /db_xref="HGNC:4932"
FT                   /db_xref="HSSP:1M6O"
FT                   /db_xref="InterPro:IPR001039"
FT                   /db_xref="InterPro:IPR003006"
FT                   /db_xref="InterPro:IPR003597"
FT                   /db_xref="InterPro:IPR007110"
FT                   /db_xref="InterPro:IPR011161"
FT                   /db_xref="InterPro:IPR011162"
FT                   /db_xref="InterPro:IPR013783"
FT                   /db_xref="UniProtKB/TrEMBL:Q95IB6"
FT                   /protein_id="AAL08024.1"
FT                   /translation="SHSMRYFYTAMSRPGRGEPRFITVGYVDDTLFVRFDSDATSPRKE
FT                   PRAPWIEQEGPEYWDRETQISKTNTQTYRENLRTALRYYNQSEAGSHIIQRMYGCDVGP
FT                   DGRLLRGYDQDAYDGKDYIALNEDLSSWTAADTAAQITQRKWEAARVAEQDRAYLEGLC
FT                   VESLRRYLENGKETLQRADPPKTHVTHHPISDHEATLRCWALGFYPAEITLTWQRDGED
FT                   QTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRW"
FT   exon            1..276
FT                   /gene="HLA-B"
FT                   /number=4
FT   variation       49
FT                   /gene="HLA-B"
FT                   /replace="t"
FT                   /note="compared to HLA-B*4402 allele; results in valine to
FT                   alanine substitution"
XX
SQ   Sequence 276 BP; 68 A; 84 C; 82 G; 42 T; 0 other;
     accccccaaa gacacatgtg acccaccacc ccatctctga ccatgaggcc accctgaggt        60
     gctgggccct gggcttctac cctgcggaga tcacactgac ctggcagcgg gatggcgagg       120
     accaaactca ggacaccgag cttgtggaga ccagaccagc aggagataga accttccaga       180
     agtgggcagc tgtggtggtg ccttctggag aagagcagag atacacatgc catgtacagc       240
     atgaggggct gccgaagccc ctcaccctga gatggg                                 276
//