Dbfetch

ID   AH010725; SV 2; linear; genomic DNA; STD; HUM; 1020 BP.
XX
AC   AH010725; AF363012-AF363014;
XX
DT   02-SEP-2016 (Rel. 129, Created)
DT   02-SEP-2016 (Rel. 129, Last updated, Version 1)
XX
DE   Homo sapiens chromosome 6 MHC class I antigen (HLA-B) gene, HLA-B*39
DE   variant allele, exons 2 through 4.
XX
KW   .
XX
OS   Homo sapiens (human)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC   Homo.
XX
RN   [1]
RP   1-1020
RA   Smith A.G., McKinney S., Warnock S., Regen L., Choo Y., Hansen J.A.,
RA   Sprague M.;
RT   "HLA class I null allele frequencies";
RL   Unpublished.
XX
RN   [2]
RP   1-1020
RA   Smith A.G., McKinney S., Warnock S., Regen L., Choo Y., Hansen J.A.,
RA   Sprague M.;
RT   ;
RL   Submitted (22-MAR-2001) to the INSDC.
RL   Clinical, Seattle Cancer Care Alliance, 825 Eastlake East, Seattle, WA
RL   98109, USA
XX
DR   MD5; bc975b8283de515fcc230c4a4b9dce9d.
XX
CC   On or before Aug 25, 2016 this sequence version replaced
CC   gi:13937027, gi:13937028, gi:13937029, gi:13937026.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1020
FT                   /organism="Homo sapiens"
FT                   /chromosome="6"
FT                   /map="6p21"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:9606"
FT   gene            <1..>1020
FT                   /gene="HLA-B"
FT                   /allele="HLA-B*39 variant"
FT                   /note="null allele"
FT   mRNA            join(<1..270,371..644,745..>1020)
FT                   /gene="HLA-B"
FT                   /allele="HLA-B*39 variant"
FT                   /product="MHC class I antigen"
FT   misc_feature    1..1020
FT                   /gene="HLA-B"
FT                   /allele="HLA-B*39 variant"
FT                   /note="Original segmented set titles: Homo sapiens; Homo
FT                   sapiens MHC class I antigen (HLA-B) pseudogene, HLA-B*39
FT                   variant null allele, exon 2.; Homo sapiens MHC class I
FT                   antigen (HLA-B) pseudogene, HLA-B*39 variant null allele,
FT                   exon 3.; Homo sapiens MHC class I antigen (HLA-B)
FT                   pseudogene, HLA-B*39 variant null allele, exon 4 and
FT                   partial sequence."
FT   exon            1..270
FT                   /gene="HLA-B"
FT                   /allele="HLA-B*39 variant"
FT                   /number=2
FT   gap             271..370
FT                   /estimated_length=unknown
FT   exon            371..644
FT                   /gene="HLA-B"
FT                   /allele="HLA-B*39 variant"
FT                   /number=3
FT   variation       428
FT                   /gene="HLA-B"
FT                   /replace="ccg"
FT                   /note="compared to HLA-B*3901"
FT   gap             645..744
FT                   /estimated_length=unknown
FT   exon            745..1020
FT                   /gene="HLA-B"
FT                   /allele="HLA-B*39 variant"
FT                   /number=4
XX
SQ   Sequence 1020 BP; 182 A; 255 C; 271 G; 112 T; 200 other;
     gctcccactc catgaggtat ttctacacct ccgtgtcccg gcccggccgc ggggagcccc        60
     gcttcatctc agtgggctac gtggacgaca cgcagttcgt gaggttcgac agcgacgccg       120
     cgagtccgag agaggagccg cgggcgccgt ggatagagca ggaggggccg gaatattggg       180
     accggaacac acagatctgc aagaccaaca cacagactga ccgagagagc ctgcggaacc       240
     tgcgcggcta ctacaaccag agcgaggccg nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn       300
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn       360
     nnnnnnnnnn ggtctcacac cctccagagg atgtacggct gcgacgtggg gccggacggg       420
     cgcctcctcc gggcataacc agttcgccta cgacggcaag gattacatcg ccctgaacga       480
     ggacctgagc tcctggaccg cggcggacac cgcggctcag atcacccagc gcaagtggga       540
     ggcggcccgt gtggcggagc agctgagaac ctacctggag ggcacgtgcg tggagtggct       600
     ccgcagatac ctggagaacg ggaaggagac gctgcagcgc gcggnnnnnn nnnnnnnnnn       660
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn       720
     nnnnnnnnnn nnnnnnnnnn nnnnaccccc caaagacaca tgtgacccac caccccatct       780
     ctgaccatga ggccaccctg aggtgctggg ccctgggctt ctaccctgcg gagatcacac       840
     tgacctggca gcgggatggc gaggaccaaa ctcaggacac cgagcttgtg gagaccagac       900
     cagcaggaga cagaaccttc cagaagtggg cagctgtggt ggtgccttct ggagaagagc       960
     agagatacac atgccatgta cagcatgagg ggctgccgaa gcccctcacc ctgagatggg      1020
//