Dbfetch
ID AF305699; SV 2; linear; mRNA; STD; HUM; 1082 BP. XX AC AF305699; XX DT 08-NOV-2000 (Rel. 65, Created) DT 07-OCT-2008 (Rel. 97, Last updated, Version 8) XX DE Homo sapiens MHC class I antigen precursor (HLA-A) mRNA, HLA-A*0214 allele, DE partial cds. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-1082 RX DOI; 10.1007/s002510100299. RX PUBMED; 11261925. RA Luscher M.A., MacDonald K.S., Bwayo J.J., Plummer F.A., Barber B.H.; RT "Sequence and peptide-binding motif for a variant of HLA-A*0214 (A*02142) RT in an HIV-1-resistant individual from the Nairobi Sex Worker cohort"; RL Immunogenetics 53(1):10-14(2001). XX RN [2] RC Erratum RP 1-1082 RA Luscher M.A., Su J., MacDonald K.S., Bwayo J.J., Plummer F.A., Barber B.H.; RT "Erratum: Sequence and peptide-binding motif for a variant of HLA-A*0214 RT (A*02142) in an HIV-1-resistant individual from the Nairobi Sex Worker RT cohort"; RL Immunogenetics 53(8):717-717(2001). XX RN [3] RP 1-1082 RA Luscher M.A., MacDonald K.S., Bwayo J.J., Plummer F.A., Barber B.H., Su J.; RT ; RL Submitted (14-SEP-2000) to the INSDC. RL Division of Clinical Sciences, University of Toronto, 6366-1 King's College RL Circle, Toronto, ON M5S 1A8, Canada XX DR MD5; 03ac570fb3b4db4f259d32e222f6e5fe. DR H-InvDB; HIT000076784_03.4. XX CC On Aug 3, 2001 this sequence version replaced gi:11120554. XX FH Key Location/Qualifiers FH FT source 1..1082 FT /organism="Homo sapiens" FT /chromosome="6" FT /map="6p21.3" FT /mol_type="mRNA" FT /country="Kenya" FT /sex="female" FT /cell_line="ML1260" FT /cell_type="EBV-transformed B cell" FT /db_xref="taxon:9606" FT CDS <1..>1082 FT /codon_start=2 FT /gene="HLA-A" FT /product="MHC class I antigen precursor" FT /note="human leukocyte antigen" FT /db_xref="GOA:Q9GJ24" FT /db_xref="H-InvDB:HIT000076784_02.4" FT /db_xref="IMGT/HLA:A*02:14" FT /db_xref="InterPro:IPR001039" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR010579" FT /db_xref="InterPro:IPR011161" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR036179" FT /db_xref="InterPro:IPR037055" FT /db_xref="UniProtKB/TrEMBL:Q9GJ24" FT /protein_id="AAG30922.2" FT /translation="VMAPRTLVLLLSGALALTQTWAGSHSMRYFYTSVSRPGRGEPRFI FT AVGYVDDTQFVRFDSDAASRRMEPRAPWIEQEGPEYWDGETRKVKAHSQTHRVDLGTLR FT GYYNQSEAGSHTLQRMYGCDVGSDWRFLRGYHQYAYDGKDYIALKEDLRSWTAADMAAQ FT TTKHKWEAAHVAEQLRAYLEGTCVEWLRRYLENGKETLQRTDAPKTHMTHHAVSDHEAT FT LRCWALSFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGQEQRYTC FT HVQHEGLPKPLTLRWEPSSQPTIPIVGIIAGLVLFGAVITGAVVAAVMWRRKSSDRKGG FT SYSQAASSDSAQGSDVSLTA" FT sig_peptide <1..67 FT /gene="HLA-A" FT misc_feature 68..340 FT /gene="HLA-A" FT /note="Region: alpha-1 domain" FT misc_feature 338..616 FT /gene="HLA-A" FT /note="Region: alpha-2 domain" FT misc_feature 614..892 FT /gene="HLA-A" FT /note="Region: alpha-3 domain" FT misc_feature 890..1009 FT /gene="HLA-A" FT /note="Region: transmembrane domain" FT misc_feature 1007..1082 FT /gene="HLA-A" FT /note="Region: intracellular domain" XX SQ Sequence 1082 BP; 214 A; 323 C; 363 G; 182 T; 0 other; cgtcatggcg ccccgaaccc tcgtcctgct actctcgggg gctctggccc tgacccagac 60 ctgggcgggc tctcactcca tgaggtattt ctacacctcc gtgtcccggc ccggccgcgg 120 ggagccccgc ttcatcgcag tgggctacgt ggacgacacg cagttcgtgc ggttcgacag 180 cgacgccgcg agccggagga tggagccgcg ggcgccgtgg atagagcagg agggtccgga 240 gtattgggac ggggagacac ggaaagtgaa ggcccactca cagactcacc gagtggacct 300 ggggaccctg cgcggctact acaaccagag cgaggccggt tctcacaccc tccagaggat 360 gtatggctgc gacgtggggt cggactggcg cttcctgcgc gggtaccacc agtacgccta 420 cgacggcaag gattacatcg ccctgaaaga ggacctgcgc tcttggaccg cggcggacat 480 ggcagctcag accaccaagc acaagtggga ggcggcccat gtggcggagc agttgagagc 540 ctacctggag ggcacgtgcg tggagtggct ccgcagatac ctggagaacg ggaaggagac 600 gctgcagcgc acggacgccc ccaaaacgca tatgactcac cacgctgtct ctgaccatga 660 agccaccctg aggtgctggg ccctgagctt ctaccctgcg gagatcacac tgacctggca 720 gcgggatggg gaggaccaga cccaggacac ggagctcgtg gagaccaggc ctgcagggga 780 tggaaccttc cagaagtggg cggctgtggt ggtgccttct ggacaggagc agagatacac 840 ctgccatgtg cagcatgagg gtttgcccaa gcccctcacc ctgagatggg agccgtcttc 900 ccagcccacc atccccatcg tgggcatcat tgctggcctg gttctctttg gagctgtgat 960 cactggagct gtggtcgctg ctgtgatgtg gaggaggaag agctcagata gaaaaggagg 1020 gagctactct caggctgcaa gcagtgacag tgcccagggc tctgatgtgt ctctcacagc 1080 tt 1082 //