Dbfetch

Dbfetch

ID   AF264747; SV 1; linear; genomic DNA; STD; HUM; 210 BP.
XX
AC   AF264747;
XX
DT   08-JUN-2001 (Rel. 68, Created)
DT   17-JUN-2008 (Rel. 96, Last updated, Version 5)
XX
DE   Homo sapiens MHC class I chain-related protein A (MICA) gene, MICA*00901
DE   allele, exon 6 and partial cds.
XX
KW   .
XX
OS   Homo sapiens (human)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC   Homo.
XX
RN   [1]
RP   1-210
RX   DOI; 10.1034/j.1399-0039.2001.057006520.x.
RX   PUBMED; 11556982.
RA   Obuchi N., Takahashi M., Nouchi T., Satoh M., Arimura T., Ueda K., Akai J.,
RA   Ota M., Naruse T., Inoko H., Numano F., Kimura A.;
RT   "Identification of MICA alleles with a long Leu-repeat in the transmembrane
RT   region and no cytoplasmic tail due to a frameshift-deletion in exon 4";
RL   Tissue Antigens 57(6):520-535(2001).
XX
RN   [2]
RP   1-210
RA   Obuchi N., Kimura A.;
RT   ;
RL   Submitted (08-MAY-2000) to the INSDC.
RL   Molecular Pathology, Medical Research Institute, Tokyo Medical and Dental
RL   University, 2-3-10 Kanda-Surugadai, Chiyoda-Ku, Tokyo 101-0062, Japan
XX
DR   Ensembl-Gn; ENSG00000183214; Homo_sapiens.
DR   Ensembl-Tr; ENST00000400325; Homo_sapiens.
DR   IMGT/HLA; HLA01498; MICA*049.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..210
FT                   /organism="Homo sapiens"
FT                   /chromosome="6"
FT                   /map="6p21.3"
FT                   /mol_type="genomic DNA"
FT                   /cell_line="LUY"
FT                   /cell_type="B-lymphoblastoid"
FT                   /db_xref="taxon:9606"
FT   mRNA            join(AF264744.1:<25..279,AF264744.1:554..841,
FT                   AF264746.1:25..303,AF264746.1:403..540,33..>210)
FT                   /gene="MICA"
FT                   /product="MHC class I chain-related protein A"
FT   CDS             join(AF264744.1:<25..279,AF264744.1:554..841,
FT                   AF264746.1:25..303,AF264746.1:403..540,33..160)
FT                   /codon_start=3
FT                   /gene="MICA"
FT                   /product="MHC class I chain-related protein A"
FT                   /db_xref="GOA:Q29983"
FT                   /db_xref="HGNC:7090"
FT                   /db_xref="InterPro:IPR001039"
FT                   /db_xref="InterPro:IPR003597"
FT                   /db_xref="InterPro:IPR007110"
FT                   /db_xref="InterPro:IPR011161"
FT                   /db_xref="InterPro:IPR011162"
FT                   /db_xref="InterPro:IPR013783"
FT                   /db_xref="PDB:1B3J"
FT                   /db_xref="PDB:1HYR"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q29983"
FT                   /protein_id="AAK58538.1"
FT                   /translation="PHSLRYNLTVLSWDGSVQSGFLAEVHLDGQPFLRYDRQKCRAKPQ
FT                   GQWAEDVLGNKTWDRETRDLTGNGKDLRMTLAHIKDQKEGLHSLQEIRVCEIHEDNSTR
FT                   SSQHFYYDGELFLSQNVETEEWTVPQSSRAQTLAMNVRNFLKEDAMKTKTHYHAMHADC
FT                   LQELRRYLESSVVLRRTVPPMVNVTRSEASEGNITVTCRASSFYPRNITLTWRQDGVSL
FT                   SHDTQQWGDVLPDGNGTYQTWVATRICQGEEQRFTCYMEHSGNHSTHPVPSGKVLVLQS
FT                   HWQTFHVSAVAAAAAAIFVIIIFYVRCCKKKTSAAEGPELVSLQVLDQHPVGMSDHRDA
FT                   TQLGFQPLMSALGSTGSTEGA"
FT   exon            33..>210
FT                   /gene="MICA"
FT                   /number=6
FT   3'UTR           161..>210
FT                   /gene="MICA"
XX
SQ   Sequence 210 BP; 42 A; 64 C; 54 G; 50 T; 0 other;
     ggagcattta cccatttccc tcttttctcc agagctcgtg agcctgcagg tcctggatca        60
     acacccagtt gggatgagtg accacaggga tgccacacag ctcggatttc agcctctgat       120
     gtcagctctt gggtccactg gctccactga gggcgcctag actctacagc caggcggctg       180
     gaattgaatt ccctgcctgg atctcacaag                                        210
//