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EBI Dbfetch

ID   AF097403; SV 1; linear; genomic DNA; STD; HUM; 822 BP.
XX
AC   AF097403;
XX
DT   27-APR-1999 (Rel. 59, Created)
DT   17-JUN-2008 (Rel. 96, Last updated, Version 6)
XX
DE   Homo sapiens MHC class I chain-related protein A (MICA) gene, MICA-017
DE   allele, partial cds.
XX
KW   .
XX
OS   Homo sapiens (human)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC   Homo.
XX
RN   [1]
RP   1-822
RX   DOI; 10.1007/s002510050536.
RX   PUBMED; 10380703.
RA   Fodil N., Pellet P., Laloux L., Hauptmann G., Theodorou I., Bahram S.;
RT   "MICA haplotypic diversity";
RL   Immunogenetics 49(6):557-560(1999).
XX
RN   [2]
RP   1-822
RA   Fodil N., Pellet P., Theodorou I., Bahram S.;
RT   ;
RL   Submitted (21-SEP-1998) to the INSDC.
RL   Centre de Recherche d'Immunologie et d'Hematologie, Faculte de Medecine, 4
RL   rue Kirschleger, Strasbourg 67085, France
XX
DR   MD5; f75457170f82a73b07192093a28e0808.
DR   Ensembl-Gn; ENSG00000183214; homo_sapiens.
DR   Ensembl-Gn; ENSG00000235233; homo_sapiens.
DR   Ensembl-Tr; ENST00000400325; homo_sapiens.
DR   Ensembl-Tr; ENST00000418465; homo_sapiens.
DR   Ensembl-Tr; ENST00000547609; homo_sapiens.
DR   IMGT/LIGM; AF097403.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..822
FT                   /organism="Homo sapiens"
FT                   /chromosome="6"
FT                   /map="6p21.3"
FT                   /mol_type="genomic DNA"
FT                   /note="The sequence deposited represents exons 2, 3 and 4
FT                   of MICA gene encoding the extracellular alpha1, alpha2 and
FT                   alpha3 domains of the mature protein. The DNA source has
FT                   been derived from genomic DNA of a set of HLA Homozygous
FT                   Typing Cell Lines (HTCLs) provided by the 10th and 11th
FT                   International HLA workshop"
FT                   /db_xref="taxon:9606"
FT   CDS             <1..>822
FT                   /codon_start=1
FT                   /gene="MICA"
FT                   /product="MHC class I chain-related protein A"
FT                   /db_xref="GOA:Q29983"
FT                   /db_xref="HGNC:HGNC:7090"
FT                   /db_xref="IMGT/HLA:MICA*017"
FT                   /db_xref="InterPro:IPR001039"
FT                   /db_xref="InterPro:IPR003597"
FT                   /db_xref="InterPro:IPR007110"
FT                   /db_xref="InterPro:IPR011161"
FT                   /db_xref="InterPro:IPR011162"
FT                   /db_xref="InterPro:IPR013783"
FT                   /db_xref="PDB:1B3J"
FT                   /db_xref="PDB:1HYR"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q29983"
FT                   /protein_id="AAD27006.1"
FT                   /translation="EPHSLRYNLTVLSGDGSVQSGFLAEVHLDGQPFLRCDRQKCRAKP
FT                   QGQWAEDVLGNKTWDRETRDLTGNGKDLRMTLAHIKDQKEGLHSLREIRVCEIHEDNST
FT                   RSSQHFYYDGELFLSQNLETEEWTMPQSSRAQTLAMNVRNFLKEDAMKTKTHYHAMHAD
FT                   CLQELRRYLKSGVVLRRTVPPMVNVTRSEASEGNITVTCRASGFYPWNITLSWRQDGVS
FT                   LSHDTQQWGDVLPDGNGTYQTWVATRICQGEEQRFTCYMEHSGNHSTHPVPS"
XX
SQ   Sequence 822 BP; 213 A; 218 C; 236 G; 155 T; 0 other;
     gagccccaca gtcttcgtta taacctcacg gtgctgtccg gggatggatc tgtgcagtca        60
     gggtttctcg ctgaggtaca tctggatggt cagcccttcc tgcgctgtga caggcagaaa       120
     tgcagggcaa agccccaggg acagtgggca gaagatgtcc tgggaaataa gacatgggac       180
     agagagacca gggacttgac agggaacgga aaggacctca ggatgaccct ggctcatatc       240
     aaggaccaga aagaaggctt gcattccctc cgggagatta gggtctgtga gatccatgaa       300
     gacaacagca ccaggagctc ccagcatttc tactacgatg gggagctctt cctctcccaa       360
     aacctggaga ctgaggaatg gacaatgccc cagtcctcca gagctcagac cttggccatg       420
     aacgtcagga atttcttgaa ggaagatgcc atgaagacca agacacacta tcacgctatg       480
     catgcagact gcctgcagga actacggcga tatctaaaat ccggcgtagt cctgaggaga       540
     acagtgcccc ccatggtgaa tgtcacccgc agcgaggcct cagagggcaa cattaccgtg       600
     acatgcaggg cttctggctt ctatccctgg aatatcacac tgagctggcg tcaggatggg       660
     gtatctttga gccacgacac ccagcagtgg ggggatgtcc tgcctgatgg gaatggaacc       720
     taccagacct gggtggccac caggatttgc caaggagagg agcagaggtt cacctgctac       780
     atggaacaca gcgggaatca cagcactcac cctgtgccct ct                          822
//


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