Dbfetch
ID AF053546; SV 1; linear; mRNA; STD; VRT; 1172 BP. XX AC AF053546; XX DT 02-APR-1998 (Rel. 55, Created) DT 03-MAR-2000 (Rel. 62, Last updated, Version 4) XX DE Ictalurus punctatus MHC class I alpha chain Icpu-UCA mRNA (Icpu-UCA*01 DE allele), partial cds. XX KW . XX OS Ictalurus punctatus (channel catfish) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; OC Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Siluriformes; OC Ictaluridae; Ictalurus. XX RN [1] RP 1-1172 RX DOI; 10.1007/s002510050497. RX PUBMED; 10079294. RA Antao A.B., Chinchar V.G., McConnell T.J., Miller N.W., Clem L.W., RA Wilson M.R.; RT "MHC class I genes of the channel catfish: sequence analysis and RT expression"; RL Immunogenetics 49(4):303-311(1999). XX RN [2] RP 1-1172 RA Antao A.B., Chinchar V.G., McConnell T.J., Miller N.W., Clem L.W., RA Wilson M.R.; RT ; RL Submitted (13-MAR-1998) to the INSDC. RL Microbiology, University of Mississippi Medical Center, 2500 North State RL Street, Jackson, MS 39216, USA XX DR MD5; 6ddccc8f0ff160776853a8fa6235cf38. DR IMGT/LIGM; AF053546. XX FH Key Location/Qualifiers FH FT source 1..1172 FT /organism="Ictalurus punctatus" FT /mol_type="mRNA" FT /cell_line="clonal B line 1B10" FT /db_xref="taxon:7998" FT CDS 189..>1172 FT /codon_start=1 FT /gene="Icpu-UCA" FT /product="MHC class I alpha chain" FT /db_xref="InterPro:IPR001039" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR011161" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR036179" FT /db_xref="InterPro:IPR037055" FT /db_xref="UniProtKB/TrEMBL:O62893" FT /protein_id="AAD08647.1" FT /translation="MAGFSAVMKVLIFLTFSLHLSSAVTHSLQYVYTAVTPGVNFPEFT FT SLGQLDGQQFTYYDSKIKKAIPKTEWIQKVNADDPHYWNRGTQTLQGAQETFKVDVDTL FT MQRFNQTAGVHTVQMMCGCERDDDGTTRGFLQHGYDGEDFVSLDLKTKTWIAPTPQAVI FT TKNKWDATGAAANQQNYLENICIEWLQKYVAYGRETLERKVPPTASVFQEEESSPEVVC FT HATGFFPKTVMITWQKDGEDVHEDVELRETLPNQDGSFQKRSILTVSAEDLQKHTYTCV FT IQHSSLGKEIVLPVSERRILRGGGSGGGSGGVPIGIIVGVVAVLLVL" XX SQ Sequence 1172 BP; 320 A; 245 C; 324 G; 283 T; 0 other; gctctctcct tgagagacgg aacattcacg gagaacatag cagtaacaga ggatctgtaa 60 ctttctctca gtacagtgga agttattatc agtaaattat tattatttgt gtgtctttgt 120 gtgttagttc agtgttgtat tgggtgagag attggattag attagattgg attagatcag 180 acggagagat ggcgggcttc agtgcagtta tgaaagttct gatcttcctc acattttctc 240 tccatctttc atcagcagtc acacactctc tacagtacgt ctacactgca gttacaccag 300 gagtaaattt cccagaattc acgtctctgg gtcagctgga tggacagcag tttacatact 360 acgacagtaa gatcaagaag gcgatcccga agacagagtg gatacagaag gtcaatgctg 420 atgatccaca ttactggaac agagggacac agactctgca gggtgctcag gagaccttca 480 aagtcgatgt ggatacactg atgcagcgct ttaatcagac tgcaggagtt cacacagtgc 540 agatgatgtg cggctgtgag cgtgatgatg acggcaccac tagaggattc ttgcagcacg 600 gttatgatgg agaagatttc gtcagtctgg atctgaaaac taaaacatgg atcgctccga 660 cacctcaagc tgtgatcacc aagaacaagt gggacgctac aggagctgcg gctaatcagc 720 agaactacct ggagaacatc tgtatcgagt ggttacagaa gtacgtggct tacggcagag 780 agactctgga gaggaaagtt cctcctacag cgtcagtgtt ccaggaagaa gaatcttctc 840 cagaggtggt gtgtcatgct acaggtttct tccccaaaac agtgatgatc acctggcaga 900 aggacggaga ggacgtgcat gaggacgtgg agctcagaga gacgttaccc aaccaggatg 960 gaagcttcca gaagagaagc attctgacag tctcagctga ggatctgcag aaacacacct 1020 acacctgcgt gattcagcac agcagcttgg ggaaggagat agtgctgcct gtgagcgagc 1080 gccgaatcct gagaggtgga ggatcaggtg gaggatcagg tggagttccg atcggtatca 1140 tcgttggtgt agtcgcggtt ctcctggttc tc 1172 //