Dbfetch

Dbfetch

ID   AB839765; SV 1; linear; genomic DNA; STD; HUM; 1270 BP.
XX
AC   AB839765;
XX
DT   15-JAN-2014 (Rel. 119, Created)
DT   15-JAN-2014 (Rel. 119, Last updated, Version 1)
XX
DE   Homo sapiens HLA-A gene for MHC class I antigen, partial cds, allele:
DE   HLA-A*02 new.
XX
KW   .
XX
OS   Homo sapiens (human)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC   Homo.
XX
RN   [1]
RP   1-1270
RA   Ulrich S.;
RT   ;
RL   Submitted (22-JUL-2013) to the INSDC.
RL   Contact:Silvia Ulrich Medical University of Graz, Department of Blood Group
RL   Serology and Transfusion Medicine; Auenbruggerplatz 3, Graz 8036, Austria
XX
RN   [2]
RA   Ulrich S.;
RT   "New HLA A*02 allele";
RL   Unpublished.
XX
DR   MD5; 4883c4259d57c8f68901194070b3aa51.
DR   IMGT/HLA; HLA-A*02:01:01:04; HLA11198.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1270
FT                   /organism="Homo sapiens"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:9606"
FT   CDS             join(<53..322,529..804,962..>1237)
FT                   /codon_start=3
FT                   /transl_table=1
FT                   /gene="HLA-A"
FT                   /allele="HLA-A*02 new"
FT                   /product="MHC class I antigen"
FT                   /db_xref="InterPro:IPR001039"
FT                   /db_xref="InterPro:IPR003006"
FT                   /db_xref="InterPro:IPR003597"
FT                   /db_xref="InterPro:IPR007110"
FT                   /db_xref="InterPro:IPR011161"
FT                   /db_xref="InterPro:IPR011162"
FT                   /db_xref="InterPro:IPR013783"
FT                   /db_xref="InterPro:IPR036179"
FT                   /db_xref="InterPro:IPR037055"
FT                   /db_xref="UniProtKB/TrEMBL:W0T236"
FT                   /protein_id="BAO37622.1"
FT                   /translation="SHSMRYFFTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRME
FT                   PRAPWIEQEGPEYWDGETRKVKAHSQTHRVDLGTLRGYYNQSEAGSHTVQRMYGCDVGS
FT                   DWRFLRGYHQYAYDGKDYIALKEDLRSWTAADMAAQTTKHKWEAAHVAEQLRAYLEGTC
FT                   VEWLRRYLENGKETLQRTDAPKTHMTHHAVSDHEATLRCWALSFYPAEITLTWQRDGED
FT                   QTQDTELVETRPAGDGTFQKWAAVVVPSGQEQRYTCHVQHEGLPKPLTLRW"
FT   gap             379..478
FT                   /estimated_length=100
FT   gap             858..957
FT                   /estimated_length=100
XX
SQ   Sequence 1270 BP; 204 A; 322 C; 385 G; 158 T; 201 other;
     aagccgcgcc gggaggaggg tcgggcgggt ctcagccact cctcgtcccc aggctctcac        60
     tccatgaggt atttcttcac atccgtgtcc cggcccggcc gcggggagcc ccgcttcatc       120
     gcagtgggct acgtggacga cacgcagttc gtgcggttcg acagcgacgc cgcgagccag       180
     aggatggagc cgcgggcgcc gtggatagag caggagggtc cggagtattg ggacggggag       240
     acacggaaag tgaaggccca ctcacagact caccgagtgg acctggggac cctgcgcggc       300
     tactacaacc agagcgaggc cggtgagtga ccccggcccg gggcgcaggt cacgacctct       360
     catcccccac ggacgggcnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn       420
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnngg       480
     ggcggggcgg ggctcggggg accgggctga ccgcggggtc cgggcnaggt tctcacaccg       540
     tccagaggat gtatggctgc gacgtggggt cggactggcg cttcctccgc gggtaccacc       600
     agtacgccta cgacggcaag gattacatcg ccctgaaaga ggacctgcgc tcttggaccg       660
     cggcggacat ggcagctcag accaccaagc acaagtggga ggcggcccat gtggcggagc       720
     agttgagagc ctacctggag ggcacgtgcg tggagtggct ccgcagatac ctggagaacg       780
     ggaaggagac gctgcagcgc acgggtacca ggggccacgg ggcgcctccc tgatcgcctg       840
     tagatctccc gggctggnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn       900
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnaca       960
     gacgccccca aaacgcatat gactcaccac gctgtctctg accatgaagc caccctgagg      1020
     tgctgggccc tgagcttcta ccctgcggag atcacactga cctggcagcg ggatggggag      1080
     gaccagaccc aggacacgga gctcgtggag accaggcctg caggggatgg aaccttccag      1140
     aagtgggcgg ctgtggtggt gccttctgga caggagcaga gatacacctg ccatgtgcag      1200
     catgagggtt tgcccaagcc cctcaccctg agatggggta aggagggaga cgggggtgtc      1260
     atgtctttta                                                             1270
//