Dbfetch
ID AB829605; SV 1; linear; genomic DNA; STD; HUM; 1022 BP. XX AC AB829605; XX DT 04-JUL-2013 (Rel. 117, Created) DT 04-JUL-2013 (Rel. 117, Last updated, Version 1) XX DE Homo sapiens HLA-C gene for MHC class I antigen, partial cds, allele: DE HLA-JMDP-C-026. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-1022 RA Shimizu M., Nakajima F., Tadokoro K.; RT ; RL Submitted (02-JUL-2013) to the INSDC. RL Contact:Marie Shimizu Japanese Red Cross Society, Central Blood Institute; RL Tatsumi 2-1-67, Koto-ku, Tokyo 135-8521, Japan XX RN [2] RA Shimizu M., Nakajima F., Tadokoro K.; RT "HLA-JMDP-C-026"; RL Unpublished. XX DR MD5; 0f5cb7bc8fe80b52e13c13466cbd163f. DR IMGT/HLA; HLA-C*03:196; HLA09931. XX FH Key Location/Qualifiers FH FT source 1..1022 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /note="HLA-A*24:02/A*26:03,B*35:01/B*52:01,C*JMDP-C-026/ FT C*12:02:02,DRB1*04:03/DRB1*15:02,JMDP36K0161" FT /db_xref="taxon:9606" FT CDS join(<1..270,371..646,747..>1022) FT /codon_start=3 FT /transl_table=1 FT /gene="HLA-C" FT /allele="HLA-JMDP-C-026" FT /product="MHC class I antigen" FT /db_xref="InterPro:IPR001039" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR011161" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR036179" FT /db_xref="InterPro:IPR037055" FT /db_xref="UniProtKB/TrEMBL:S6BXF8" FT /protein_id="BAN60465.1" FT /translation="SHSMRYFYTAVSRPGRGEPHFIAVGYVDDTQFVRFDSDAASPRGE FT PRAPWVEQEGPEYWDRETQKYKRQAQTDRVSLRNLRGYYNQSEARSHIIQRMYGCDVGP FT DGRLLRGYDQYAYGGKDYIALNEDLRSWTAADTAAQITQRKWEAAREAEQLRAYLEGLC FT VEWLRRYLKNGKETLQRAEHPKTHVTHHPVSDHEATLRCWALGFYPAEITLTWQWDGED FT QTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPEPLTLRW" FT gap 271..370 FT /estimated_length=unknown FT gap 647..746 FT /estimated_length=unknown XX SQ Sequence 1022 BP; 171 A; 245 C; 289 G; 117 T; 200 other; gctcccactc catgaggtat ttctacaccg ctgtgtcccg gcccggccgc ggggagcccc 60 acttcatcgc agtgggctac gtggacgaca cgcagttcgt gcggttcgac agcgacgccg 120 cgagtccgag aggggagccg cgggcgccgt gggtggagca ggaggggccg gagtattggg 180 accgggagac acagaagtac aagcgccagg cacagactga ccgagtgagc ctgcggaacc 240 tgcgcggcta ctacaaccag agcgaggcca nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 300 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 360 nnnnnnnnnn ggtctcacat catccagagg atgtatggct gcgacgtggg gcccgacggg 420 cgcctcctcc gcgggtatga ccagtacgcc tacggcggca aggattacat cgccctgaac 480 gaggatctgc gctcctggac cgccgcggac acggcggctc agatcaccca gcgcaagtgg 540 gaggcggccc gtgaggcgga gcagctgaga gcctacctgg agggcctgtg cgtggagtgg 600 ctccgcagat acctgaagaa tgggaaggag acgctgcagc gcgcggnnnn nnnnnnnnnn 660 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 720 nnnnnnnnnn nnnnnnnnnn nnnnnnaaca cccaaagaca cacgtgaccc accatcccgt 780 ctctgaccat gaggccaccc tgaggtgctg ggccctgggc ttctaccctg cggagatcac 840 actgacctgg cagtgggatg gggaggacca aactcaggac actgagcttg tggagaccag 900 gccagcagga gatggaacct tccagaagtg ggcagctgtg gtggtgcctt ctggagaaga 960 gcagagatac acgtgccatg tgcagcacga ggggctgccg gagcccctca ccctgagatg 1020 gg 1022 //