ID AB435519; SV 1; linear; genomic DNA; STD; HUM; 1022 BP.
XX
AC AB435519;
XX
DT 01-MAY-2008 (Rel. 95, Created)
DT 01-MAY-2008 (Rel. 95, Last updated, Version 1)
XX
DE Homo sapiens HLA-B gene for MHC class I antigen, partial cds, allele:
DE HLA-B*5401V5.
XX
KW .
XX
OS Homo sapiens (human)
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC Homo.
XX
RN [1]
RP 1-1022
RA Nakajima F., Tadokoro K.;
RT ;
RL Submitted (28-APR-2008) to the INSDC.
RL Contact:Fumiaki Nakajima Japanese Red Cross Society, Central Blood
RL Institute; Tatsumi 2-1-67, Koto-ku, Tokyo 135-8521, Japan
XX
RN [2]
RA Nakajima F., Tadokoro K.;
RT "HLA-B*5401V5";
RL Unpublished.
XX
DR MD5; 9e6c6ff550222a834bddd4954e7b0703.
XX
FH Key Location/Qualifiers
FH
FT source 1..1022
FT /organism="Homo sapiens"
FT /mol_type="genomic DNA"
FT /note="HLA-A*2601/3303,B*4403/5401V5,DRB1*0405/1302,
FT JMDP01K024"
FT /db_xref="taxon:9606"
FT CDS join(<1..270,371..646,747..>1022)
FT /codon_start=3
FT /transl_table=1
FT /gene="HLA-B"
FT /allele="HLA-B*5401V5"
FT /product="MHC class I antigen"
FT /db_xref="IMGT/HLA:B*54:15"
FT /db_xref="InterPro:IPR001039"
FT /db_xref="InterPro:IPR003006"
FT /db_xref="InterPro:IPR003597"
FT /db_xref="InterPro:IPR007110"
FT /db_xref="InterPro:IPR011161"
FT /db_xref="InterPro:IPR011162"
FT /db_xref="InterPro:IPR013783"
FT /db_xref="InterPro:IPR036179"
FT /db_xref="InterPro:IPR037055"
FT /db_xref="UniProtKB/TrEMBL:B2DG28"
FT /protein_id="BAG31390.1"
FT /translation="SHSMRYFYTAMSRPGRGEPRFIAVGYVDDTQFVRFDSDAASPRGE
FT PRAPWVEQEGPEYWDRNTQIYKAQAQTDRESLRNLRGYYNQSEAGSHTWQTMYGCDLGP
FT DGRLLRGYDQYAYDGKDYIALNEDLSSWTAADTAAQITQRKWEAARVAEQLRAYLEGTC
FT VEWLRRYLENGKETLQRADPPKTHVTHHPISDHEATLRCWALGFYPAEITLTWQRDGED
FT QTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRW"
FT gap 271..370
FT /estimated_length=unknown
FT gap 647..746
FT /estimated_length=unknown
XX
SQ Sequence 1022 BP; 175 A; 255 C; 280 G; 112 T; 200 other;
gctcccactc catgaggtat ttctacaccg ccatgtcccg gcccggccgc ggggagcccc 60
gcttcatcgc agtgggctac gtggacgaca cgcagttcgt gcggttcgac agcgacgccg 120
cgagtccgag aggggagccg cgggcgccgt gggtggagca ggaggggccg gagtattggg 180
accggaacac acagatctac aaggcccagg cacagactga ccgagagagc ctgcggaacc 240
tgcgcggcta ctacaaccag agcgaggccg nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 300
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 360
nnnnnnnnnn ggtctcacac ttggcagacg atgtacggct gcgacctggg gcccgacggg 420
cgcctcctcc gcgggtatga ccagtacgcc tacgacggca aggattacat cgccctgaac 480
gaggacctga gctcctggac cgcggcggac accgcggctc agatcaccca gcgcaagtgg 540
gaggcggccc gtgtggcgga gcagctgaga gcctacctgg agggcacgtg cgtggagtgg 600
ctccgcagat acctggagaa cgggaaggag acgctgcagc gcgcggnnnn nnnnnnnnnn 660
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 720
nnnnnnnnnn nnnnnnnnnn nnnnnnaccc cccaaagaca cacgtgaccc accaccccat 780
ctctgaccat gaggccaccc tgaggtgctg ggccctgggc ttctaccctg cggagatcac 840
actgacctgg cagcgggatg gcgaggacca aactcaggac actgagcttg tggagaccag 900
accagcagga gatagaacct tccagaagtg ggcagctgtg gtggtgcctt ctggagaaga 960
gcagagatac acatgccatg tacagcatga ggggctgccg aagcccctca ccctgagatg 1020
gg 1022
//
