Dbfetch
ID AB032853; SV 1; linear; genomic DNA; STD; ROD; 1140 BP.
XX
AC AB032853;
XX
DT 15-OCT-1999 (Rel. 61, Created)
DT 14-APR-2005 (Rel. 83, Last updated, Version 3)
XX
DE Apodemus flavicollis mitochondrial cytb gene for cytochrome b, partial cds,
DE isolate:HS591.
XX
KW cytochrome b.
XX
OS Apodemus flavicollis (Yellow-necked field mouse)
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae;
OC Murinae; Apodemus; Sylvaemus group.
OG Mitochondrion
XX
RN [1]
RP 1-1140
RA Serizawa K., Suzuki H.;
RT ;
RL Submitted (29-SEP-1999) to the INSDC.
RL Keiko Serizawa, Hokkaido University, Graduate School of Environmental Earth
RL Sciences; North 10, West 5, Kita-ku, Sapporo 060-0810, Japan
RL (E-mail:serizawa@ees.hokudai.ac.jp, Tel:81-11-706-2225(ex.2225),
RL Fax:81-11-706-2225)
XX
RN [2]
RX DOI; 10.1023/A:1001828203201.
RX PUBMED; 10862357.
RA Serizawa K., Suzuki H., Tsuchiya K.;
RT "A phylogenetic view on species radiation in Apodemus inferred from
RT variation of nuclear and mitochondrial genes";
RL Biochem. Genet. 38(1-2):27-40(2000).
XX
DR MD5; 143e851ec7054d48116383f0c387af7e.
DR EuropePMC; PMC2490707; 18616808.
DR EuropePMC; PMC2567236; 18854415.
DR EuropePMC; PMC3485250; 23118888.
DR EuropePMC; PMC4280006; 25496476.
DR EuropePMC; PMC5980278; 29876059.
XX
FH Key Location/Qualifiers
FH
FT source 1..1140
FT /organism="Apodemus flavicollis"
FT /organelle="mitochondrion"
FT /isolate="HS591"
FT /mol_type="genomic DNA"
FT /db_xref="taxon:54292"
FT CDS 1..>1140
FT /codon_start=1
FT /transl_table=2
FT /gene="cyt b"
FT /product="cytochrome b"
FT /db_xref="GOA:Q9TDX2"
FT /db_xref="InterPro:IPR005797"
FT /db_xref="InterPro:IPR005798"
FT /db_xref="InterPro:IPR016174"
FT /db_xref="InterPro:IPR027387"
FT /db_xref="InterPro:IPR030689"
FT /db_xref="InterPro:IPR036150"
FT /db_xref="UniProtKB/TrEMBL:Q9TDX2"
FT /protein_id="BAA85239.1"
FT /translation="MTNIRKTHPLLKIINHSFIDLPAPSNISSWWNFGSLLGICLMIQI
FT LTGLFLAMHYTSDTMTAFSSVTHICRDVNYGWLIRYLHANGASMFFICLFLHVGRGMYY
FT GSYTFMETWNIGVILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEW
FT IWGGFSVDKATLTRFFAFHFILPFIIAALVIVHLLFLHETGSNNPTGLNSDADKIPFHP
FT YYTIKDILGVLMMASFLMTLVLFFPDLLGDPDNYMPANPLNTPPHIKPEWYFLFAYAIL
FT RSIPNKLGGVLALILSILILALLPFLHTSKQRSLMFRPITQTLYWILVANLLVLTWIGG
FT QPVEHPFIIIGQLASISYFSIILILMPISGIIEDKMLKWN"
XX
SQ Sequence 1140 BP; 360 A; 309 C; 140 G; 331 T; 0 other;
atgacaaaca ttcgaaaaac acacccccta ctaaaaatta ttaatcactc tttcatcgac 60
ttaccagccc catccaatat ctcatcatga tgaaactttg gctccctctt aggaatctgc 120
ctaataatcc aaatccttac aggtctattt ctagcaatac actatacatc agacacaata 180
acagcattct cttcagtaac tcatatctgc cgagacgtaa attatggatg attaattcga 240
tatttacacg caaacggagc ctcaatattc ttcatttgct tatttctaca cgtaggacga 300
ggaatatatt acggatcata caccttcata gaaacatgaa acatcggtgt aattctccta 360
ttcgcagtaa tagccacagc attcataggt tatgtccttc catgaggaca aatatccttc 420
tgaggggcaa cagtaattac aaatctatta tcagcaattc catacatcgg aactacccta 480
gtagagtgaa tctgaggagg attctcagta gataaagcta cactaacacg tttcttcgcc 540
ttccacttta tcttaccatt catcattgcc gccctagtaa tcgttcatct cctatttctc 600
catgaaactg ggtcaaataa ccccacaggc cttaactcag acgccgacaa aattccattt 660
cacccgtact atacaattaa agacattcta ggagtactca taatagcgtc attcctaata 720
accttagttc tcttcttccc agaccttcta ggtgacccgg acaactatat acctgccaac 780
ccactaaata ccccaccaca cattaaacca gaatggtact tcctatttgc atacgcaatt 840
ctacgatcca tccctaacaa attaggtgga gtcctagccc taattttatc tatccttatt 900
ctagccctat taccattcct ccacacctct aaacaacgca gcctaatatt ccgtccaatc 960
actcaaaccc tatactgaat cctagttgct aaccttctcg tcctaacttg aattggaggt 1020
caaccagtag aacacccatt tatcatcatt ggccaactag cctcaatcag ctacttctct 1080
attattctaa tcctcatacc catctcaggc attattgaag ataaaatatt aaaatgaaac 1140
//