Dbfetch
ID AB008102; SV 1; linear; mRNA; STD; HUM; 1093 BP. XX AC AB008102; XX DT 29-OCT-1997 (Rel. 53, Created) DT 07-OCT-2008 (Rel. 97, Last updated, Version 5) XX DE Homo sapiens mRNA for HLA-B*5801, complete cds. XX KW HLA-B*5801. XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-1093 RA Ogawa A.; RT ; RL Submitted (13-OCT-1997) to the INSDC. RL Atsuko Ogawa, Japanese Red Cross Central Blood Center, 1st Research RL Section; Hiroo 4-1-31, Shibuya-ku, Tokyo 150-0012, Japan RL (E-mail:ogawa@info.cbc.jrc.or.jp, Tel:81-3-5485-6009, Fax:81-3-3406-7892) XX RN [2] RX DOI; 10.1034/j.1399-0039.1999.530603.x. RX PUBMED; 10395103. RA Inoue T., Ogawa A., Tokunaga K., Ishikawa Y., Kashiwase K., Tanaka H., RA Park M.H., Jia G.J., Chimge N.-O., Sideltseva E.W., Akaza T., Tadokoro K., RA Takahashi T., Juji T.; RT "Diversity of HLA-B17 alleles and haplotypes in East Asians and a novel Cw6 RT allele (Cw*0604) associated with B*5701"; RL Tissue Antigens 53(6):534-544(1999). XX DR MD5; e0b2e3f4a83c86344e85f64a9aa3d03d. DR IMGT/HLA; HLA-B*58:01:01:01; HLA00386. XX FH Key Location/Qualifiers FH FT source 1..1093 FT /organism="Homo sapiens" FT /chromosome="6" FT /map="6p21.3" FT /isolate="Japanese HGN" FT /mol_type="mRNA" FT /sex="male" FT /haplotype="A3303 Cw0302 B5801 DRB1 1302" FT /cell_type="lymphocyte" FT /tissue_type="blood" FT /note="genotype is A3303-Cw0302-B5801-DRB1 FT 1302/A24-Cw1202-B52-DRB1 1502" FT /db_xref="taxon:9606" FT CDS 1..1089 FT /codon_start=1 FT /product="HLA-B*5801" FT /db_xref="GOA:P10319" FT /db_xref="H-InvDB:HIT000058146.10" FT /db_xref="HGNC:HGNC:4932" FT /db_xref="InterPro:IPR001039" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR010579" FT /db_xref="InterPro:IPR011161" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR036179" FT /db_xref="InterPro:IPR037055" FT /db_xref="PDB:5IM7" FT /db_xref="PDB:5INC" FT /db_xref="PDB:5IND" FT /db_xref="PDB:5V5L" FT /db_xref="PDB:5VWH" FT /db_xref="PDB:5VWJ" FT /db_xref="UniProtKB/Swiss-Prot:P10319" FT /protein_id="BAA22916.1" FT /translation="MRVTAPRTVLLLLWGAVALTETWAGSHSMRYFYTAMSRPGRGEPR FT FIAVGYVDDTQFVRFDSDAASPRTEPRAPWIEQEGPEYWDGETRNMKASAQTYRENLRI FT ALRYYNQSEAGSHIIQRMYGCDLGPDGRLLRGHDQSAYDGKDYIALNEDLSSWTAADTA FT AQITQRKWEAARVAEQLRAYLEGLCVEWLRRYLENGKETLQRADPPKTHVTHHPVSDHE FT ATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRY FT TCHVQHEGLPKPLTLRWEPSSQSTIPIVGIVAGLAVLAVVVIGAVVATVMCRRKSSGGK FT GGSYSQAASSDSAQGSDVSLTA" XX SQ Sequence 1093 BP; 220 A; 335 C; 365 G; 173 T; 0 other; atgcgggtca cggcgccccg aaccgtcctc ctgctgctct ggggggcagt ggccctgacc 60 gagacctggg ccggctccca ctccatgagg tatttctaca ccgccatgtc ccggcccggc 120 cgcggggagc cccgcttcat cgcagtgggc tacgtggacg acacccagtt cgtgaggttc 180 gacagcgacg ccgcgagtcc gaggacggag ccccgggcgc catggataga gcaggagggg 240 ccggagtatt gggacgggga gacacggaac atgaaggcct ccgcgcagac ttaccgagag 300 aacctgcgga tcgcgctccg ctactacaac cagagcgagg ccgggtctca catcatccag 360 aggatgtatg gctgcgacct ggggcccgac gggcgcctcc tccgcgggca tgaccagtcc 420 gcctacgacg gcaaggatta catcgccctg aacgaggacc tgagctcctg gaccgcggcg 480 gacaccgcgg ctcagatcac ccagcgcaag tgggaggcgg cccgtgtggc ggagcagctg 540 agagcctacc tggagggcct gtgcgtggag tggctccgca gatacctgga gaacgggaag 600 gagacgctgc agcgcgcgga ccccccaaag acacacgtga cccaccaccc cgtctctgac 660 catgaggcca ccctgaggtg ctgggccctg ggcttctacc ctgcggagat cacactgacc 720 tggcagcggg atggcgagga ccaaactcag gacactgagc ttgtggagac cagaccagca 780 ggagatagaa ccttccagaa gtgggcagct gtggtggtgc cttctggaga agagcagaga 840 tacacatgcc atgtacagca tgaggggctg ccgaagcccc tcaccctgag atgggagcca 900 tcttcccagt ccaccatccc catcgtgggc attgttgctg gcctggctgt cctagcagtt 960 gtggtcatcg gagctgtggt cgctactgtg atgtgtagga ggaagagctc aggtggaaaa 1020 ggagggagct actctcaggc tgcgtccagc gacagtgccc agggctctga tgtgtctctc 1080 acagcttgaa aag 1093 //