Dbfetch
ID Y16810; SV 1; linear; cDNA; STD; HUM; 822 BP. XX AC Y16810; XX DT 29-MAR-2011 (Rel. 201113-2, arrived in LIGM-DB) DT 18-DEC-2012 (Rel. 201251-2, Last updated, Version 4) XX DE Homo sapiens MICA gene, allele MUC-27 XX KW Immunoglobulin superfamily (IgSF); RPI-MH1Like; RPI-MH1Like-Alpha; KW Major histocompatibility superfamily (MhSF); KW related protein of the immune system (RPI); conventional-with-leader; KW regular; cDNA; undefined; functional; L-nt-sequence. XX OS Homo sapiens (human) OC cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; OC Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; OC Euteleostomi; Sarcopterygii; Dipnotetrapodomorpha; Tetrapoda; Amniota; OC Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; OC Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; OC Homo; Homo sapiens. XX RN [2] RP 1-822 RA Fodil N., Pellet P., Theodorou I., Bahram S.; RT ; RL Submitted (21-SEP-1998) to the INSDC. RL Centre de Recherche d'Immunologie et d'Hematologie, Faculte de Medecine, 4 RL rue Kirschleger, Strasbourg 67085, France XX RN [3] RX PUBMED; 8645581. RA Okamoto S., Yoshikawa K., Obata Y., Shibuya M., Aoki S., Yoshida J., RA Takahashi T.; RT "Monoclonal antibody against the fusion junction of a deletion-mutant RT epidermal growth factor receptor"; RL Br. J. Cancer 73(11):1366-1372(1996). XX DR ENA; Y16810. DR IMGT/HLA; HLA01335; MICA*017. XX CC IMGT/LIGM-DB annotation level: by annotators XX FH Key Location/Qualifiers FH FT L-nt-SEQUENCE <1..>822 FT /partial FT /allele_alias="HLA-DB allele name: MICA*017" FT /chromosome="6" FT /db_xref="taxon:9606" FT /functional FT /IMGT_allele="MICA*17" FT /IMGT_gene="MICA" FT /IMGT_map="6p21.33" FT /organism="Homo sapiens" FT L-CODING-REGION <1..>822 FT /partial FT /codon_start=3 FT /translation="PHSLRYNLTVLSGDGSVQSGFLAEVHLDGQPFLRCDRQKCR FT AKPQGQWAEDVLGNKTWDRETRDLTGNGKDLRMTLAHIKDQKEGLHSLREIRVCE FT IHEDNSTRSSQHFYYDGELFLSQNLETEEWTMPQSSRAQTLAMNVRNFLKEDAMK FT TKTHYHAMHADCLQELRRYLKSGVVLRRTVPPMVNVTRSEASEGNITVTCRASGF FT YPWNITLSWRQDGVSLSHDTQQWGDVLPDGNGTYQTWVATRICQGEEQRFTCYME FT HSGNHSTHPVPS" FT /db_xref="GOA:O60933" FT /db_xref="GOA:Q29983" FT /db_xref="HGNC:7090" FT /db_xref="InterPro:IPR001039" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR011161" FT /db_xref="InterPro:IPR013783" FT /db_xref="PDB:1B3J" FT /db_xref="PDB:1HYR" FT /db_xref="UniProtKB/Swiss-Prot:Q29983" FT /protein_id="CAA76402.1" FT G-ALPHA1-LIKE <1..254 FT /partial FT /codon_start=3 FT /translation="PHSLRYNLTVLSGDGSVQSGFLAEVHLDGQPFLRCDRQKCR FT AKPQGQWAEDVLGNKTWDRETRDLTGNGKDLRMTLAHIKDQKE" FT /AA_IMGT="AA 2 to 86, AA 40 and 41 are missing, AA 54A FT is present" FT /IMGT_note="encoded by EX2" FT G-ALPHA2-LIKE 255..542 FT /translation="GLHSLREIRVCEIHEDNSTRSSQHFYYDGELFLSQNLETEE FT WTMPQSSRAQTLAMNVRNFLKEDAMKTKTHYHAMHADCLQELRRYLKSGVVLRRT FT " FT /AA_IMGT="AA 1 to 92, AA 17, 40, 41 and 87 are FT missing, AA 49.1 to 49.5, 61A, 61B and 72A are present" FT /IMGT_note="encoded by EX3" FT SPLICE-FIRST-CODON 255..257 FT /splicing-frame="sf1" FT C-LIKE 543..821 FT /translation="VPPMVNVTRSEASEGNITVTCRASGFYPWNITLSWRQDGVS FT LSHDTQQWGDVLPDGNGTYQTWVATRICQGEEQRFTCYMEHSGNHSTHPVPS" FT /AA_IMGT="AA 1.1 to 123, AA 14 to 16, 31, 34, 94 to 96 FT and 110 to 113 are missing, AA 1.1, 45.1 to 45.6, 84.1 FT to 84.4, 85.4 to 85.1 are present" FT /IMGT_note="encoded by EX4" FT SPLICE-FIRST-CODON 543..545 FT /splicing-frame="sf1" XX SQ Sequence 822 BP; 213 A; 218 C; 236 G; 155 T; 0 other; agccccacag tcttcgttat aacctcacgg tgctgtccgg ggatggatct gtgcagtcag 60 ggtttctcgc tgaggtacat ctggatggtc agcccttcct gcgctgtgac aggcagaaat 120 gcagggcaaa gccccaggga cagtgggcag aagatgtcct gggaaataag acatgggaca 180 gagagaccag ggacttgaca gggaacggaa aggacctcag gatgaccctg gctcatatca 240 aggaccagaa agaaggcttg cattccctcc gggagattag ggtctgtgag atccatgaag 300 acaacagcac caggagctcc cagcatttct actacgatgg ggagctcttc ctctcccaaa 360 acctggagac tgaggaatgg acaatgcccc agtcctccag agctcagacc ttggccatga 420 acgtcaggaa tttcttgaag gaagatgcca tgaagaccaa gacacactat cacgctatgc 480 atgcagactg cctgcaggaa ctacggcgat atctaaaatc cggcgtagtc ctgaggagaa 540 cagtgccccc catggtgaat gtcacccgca gcgaggcctc agagggcaac attaccgtga 600 catgcagggc ttctggcttc tatccctgga atatcacact gagctggcgt caggatgggg 660 tatctttgag ccacgacacc cagcagtggg gggatgtcct gcctgatggg aatggaacct 720 accagacctg ggtggccacc aggatttgcc aaggagagga gcagaggttc acctgctaca 780 tggaacacag cgggaatcac agcactcacc ctgtgccctc tg 822 //