Dbfetch
ID U69975; SV 1; linear; gDNA; STD; HUM; 300 BP. XX AC U69975; XX DT 13-SEP-2012 (Rel. 201237-4, arrived in LIGM-DB) DT 18-DEC-2012 (Rel. 201251-2, Last updated, Version 5) XX DE Human MHC class I-like molecule PERB11.1-65.1 (PERB11.1) gene, partial cds. XX KW Immunoglobulin superfamily (IgSF); RPI-MH1Like; RPI-MH1Like-Alpha; KW Major histocompatibility superfamily (MhSF); KW related protein of the immune system (RPI); conventional-with-leader; KW regular; gDNA; undefined; functional; L-conventional-gene. XX OS Homo sapiens (human) OC cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; OC Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; OC Euteleostomi; Sarcopterygii; Dipnotetrapodomorpha; Tetrapoda; Amniota; OC Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; OC Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; OC Homo; Homo sapiens. XX RN [1] RP 1-300 RA Bosslet K., Seemann G., Sedlacek H.H.; RT "Monoclonal antibodies against tumor associated antigen, their preparation RT and use."; RL Patent number EP0388914-A/8, 26-SEP-1990. RL BEHRINGWERKE Aktiengesellschaft. XX RN [2] RP 1-300 RA Kuo P., Diamond B.; RT ; RL Submitted (22-APR-1997) to the INSDC. RL Micro. & Immunol., AECOM, 1300 Morris Park Avenue, 405 Forchheimer, Bronx, RL NY 10461, USA XX RN [3] RP 1-300 RA Chen Z., Koralov S.B., Gendelman M., Carroll M.C., Kelsoe G.; RT ; RL Submitted (28-APR-1999) to the INSDC. RL Department of Immunology, Duke University Medical Center, DUMC 3010, RL Durham, NC 27710, USA XX DR ENA; U69975. DR IMGT/HLA; HLA01022; MICA*011. XX CC IMGT/LIGM-DB annotation level: by annotators XX FH Key Location/Qualifiers FH FT L-GENE <1..>300 FT /partial FT /allele_alias="HLA-DB allele name: MICA*011" FT /chromosome="6" FT /db_xref="taxon:9606" FT /functional FT /haplotype="65.1 MHC ancestral haplotype FT (R86-12364:HLA-A33; Cw802; -B65; DRB1*0102; DQA1*0101; FT DQB1*0501)" FT /IMGT_allele="MICA*11" FT /IMGT_gene="MICA" FT /IMGT_map="6p21.33" FT /isolate="R86-12364 (AOH-100002N)" FT /mol_type="genomic DNA" FT /organism="Homo sapiens" FT L-GENE-UNIT <1..>300 FT /partial FT /db_xref="HGNC:7090" FT /db_xref="UniProtKB/TrEMBL:P79538" FT /protein_id="AAB51799.1" FT EX4 <1..49 FT /partial FT /translation="CYMEHSGNHSTHAVPS" FT C-LIKE <1..48 FT /partial FT /translation="CYMEHSGNHSTHAVPS" FT /AA_IMGT="AA 104 to 123, AA 110 to 113 are missing" FT DONOR-SPLICE 49..51 FT INTRON 50..149 FT ACCEPTOR-SPLICE 147..151 FT EX5 150..287 FT /codon_start=3 FT /translation="KVLVLQSHWQTFHVSAVAAAAAAIFVIIIFYVCCCKKKTSA FT AEGP" FT CONNECTING-REGION 150..184 FT /codon_start=3 FT /translation="KVLVLQSHWQT" FT /AA_IMGT="AA 1 to 12" FT /IMGT_note="encoded by 5' part of EX5" FT /splice-expected-nt="g" FT /splice-expectedcodon="ggg [G]" FT /splicing-frame="sf1" FT TRANSMEMBRANE-REGION185..247 FT /translation="FHVSAVAAAAAAIFVIIIFYV" FT /AA_IMGT="AA 1 to 19" FT /IMGT_note="10^11>ins^AA (2AA) compared to MICA*01 FT (AL845443)" FT /IMGT_note="encoded by middle part of EX5" FT /STR-allele="A6" FT CY-PART1 248..286 FT /translation="CCCKKKTSAAEGP" FT /AA_IMGT="AA 1 to 13" FT /IMGT_note="encoded by 3' part of EX5" FT DONOR-SPLICE 287..289 FT INTRON 288..300 XX SQ Sequence 300 BP; 65 A; 61 C; 88 G; 86 T; 0 other; tgctacatgg aacacagcgg gaatcacagc actcacgctg tgccctctgg tgagcctagg 60 gtgacgctgg agagggtcag accagggtag ggacagcagg gatggctgtg gctctctgcc 120 cagtgtataa caagtccctt ttttttcagg gaaagtgctg gtgcttcaga gtcattggca 180 gacattccat gtttctgctg ttgctgctgc tgctgctgct atttttgtta ttattatttt 240 ctatgtctgt tgttgtaaga agaaaacatc agctgcagag ggtccaggtg agaaaagggt 300 //