Dbfetch
ID AH006332; SV 2; linear; gDNA; STD; HUM; 1022 BP. XX AC AH006332; AF079419-AF079421; XX DT 13-NOV-2012 (Rel. 201246-2, arrived in LIGM-DB) DT 25-JUN-2015 (Rel. 201526-4, Last updated, Version 3) XX DE Homo sapiens MHC class I chain-related A TAND protein (MICA) gene, DE MICA-TAND allele, partial cds. XX KW Immunoglobulin superfamily (IgSF); RPI-MH1Like; RPI-MH1Like-Alpha; KW Major histocompatibility superfamily (MhSF); KW related protein of the immune system (RPI); conventional-with-leader; KW regular; gDNA; undefined; functional; L-conventional-gene. XX OS Homo sapiens (human) OC cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; OC Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; OC Euteleostomi; Sarcopterygii; Dipnotetrapodomorpha; Tetrapoda; Amniota; OC Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; OC Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; OC Homo; Homo sapiens. XX RN [1] RP 1-1022 RX DOI; 10.1007/s002510050644. RX PUBMED; 10866112. RA Stenvik J., Jorgensen T.; RT "Immunoglobulin D (IgD) of Atlantic cod has a unique structure"; RL Immunogenetics 51(6):452-461(2000). XX RN [2] RP 1-1022 RA Stenvik J., Joergensen T.O.E.; RT ; RL Submitted (01-JUN-1999) to the INSDC. RL Marine Biochemistry, University of Tromsoe, Tromsoe, Norway XX DR ENA; AH006332. DR Ensembl-Gn; ENSG00000183214; Homo_sapiens. DR Ensembl-Gn; ENSG00000235233; Homo_sapiens. DR Ensembl-Tr; ENST00000400325; Homo_sapiens. DR Ensembl-Tr; ENST00000418465; Homo_sapiens. DR Ensembl-Tr; ENST00000547609; Homo_sapiens. XX CC IMGT/LIGM-DB annotation level: keyword level CC CC On or before Jul 29, 2011 this sequence version replaced CC gi:3377735, gi:3377736, gi:3377737, gi:3377738. XX FH Key Location/Qualifiers (from EMBL) FH FT source 1..1022 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /db_xref="taxon:9606" FT gene <1..>1022 FT /gene="MICA" FT /allele="MICA-TAND" FT mRNA join(<1..255,356..643,744..>1022) FT /gene="MICA" FT /allele="MICA-TAND" FT /product="MHC class I chain-related A TAND protein" FT CDS join(<1..255,356..643,744..>1022) FT /codon_start=3 FT /gene="MICA" FT /allele="MICA-TAND" FT /product="MHC class I chain-related A TAND protein" FT /note="alpha 1, 2, and 3 domains" FT /db_xref="GOA:Q29983" FT /db_xref="HGNC:7090" FT /db_xref="InterPro:IPR001039" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR011161" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="PDB:1B3J" FT /db_xref="PDB:1HYR" FT /db_xref="UniProtKB/Swiss-Prot:Q29983" FT /protein_id="AAC28943.1" FT /translation="PHSLRYNLTVLSWDGSVQSGFLAEVHLDGQPFLRYDRQKCRAKPQ FT GQWAEDVLGNKTWDRETRDLTGNGKDLRMTLAHIKDQKEGLHSLQEIRVCEIHEDNSTR FT SSQHFYYDGELFLSQNVETEEWTVPQSSRAQTLAMNVRNFLKEDAMKTKTHYHAMHADC FT LQELRRYLESSVVLRRTVPPMVNVTRSEASEGNITVTCRASSFYPRNITLTWRQDGVSL FT SHDTQQWGDVLPDGNGTYQTWVATRICQGEEQRFTCYMEHSGNHSTHPVPS" FT exon 1..255 FT /gene="MICA" FT /allele="MICA-TAND" FT /number=2 FT gap 256..355 FT /estimated_length=unknown FT exon 356..643 FT /gene="MICA" FT /allele="MICA-TAND" FT /number=3 FT gap 644..743 FT /estimated_length=unknown FT exon 744..1022 FT /gene="MICA" FT /allele="MICA-TAND" FT /number=4 XX SQ Sequence 1022 BP; 215 A; 219 C; 233 G; 155 T; 200 other; agccccacag tcttcgttat aacctcacgg tgctgtcctg ggatggatct gtgcagtcag 60 ggtttcttgc tgaggtacat ctggatggtc agcccttcct gcgctatgac aggcagaaat 120 gcagggcaaa gccccaggga cagtgggcag aagatgtcct gggaaataag acatgggaca 180 gagagaccag ggacttgaca gggaacggaa aggacctcag gatgaccctg gctcatatca 240 aggaccagaa agaagnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 300 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnngcttg 360 cattccctcc aggagattag ggtctgtgag atccatgaag acaacagcac caggagctcc 420 cagcatttct actatgatgg ggagctcttc ctctcccaaa acgtggagac tgaggaatgg 480 acagtgcccc agtcctccag agctcagacc ttggccatga acgtcaggaa tttcttgaag 540 gaagatgcca tgaagaccaa gacacactat cacgctatgc atgcagactg cctgcaggaa 600 ctacggcgat atctagaatc cagcgtagtc ctgaggagaa cagnnnnnnn nnnnnnnnnn 660 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 720 nnnnnnnnnn nnnnnnnnnn nnntgccccc catggtgaat gtcacccgca gcgaggcctc 780 agagggcaac atcaccgtga catgcagggc ttccagcttc tatccccgga atatcacact 840 gacctggcgt caggatgggg tatctttgag ccacgacacc cagcagtggg gggatgtcct 900 gcctgatggg aatggaacct accagacctg ggtggccacc aggatttgcc aaggagagga 960 gcagaggttc acctgctaca tggaacacag cgggaatcac agcactcacc ctgtgccctc 1020 tg 1022 //