Dbfetch
ID AF097406; SV 1; linear; cDNA; STD; HUM; 822 BP. XX AC AF097406; XX DT 29-MAR-2011 (Rel. 201113-2, arrived in LIGM-DB) DT 18-DEC-2012 (Rel. 201251-2, Last updated, Version 4) XX DE Homo sapiens MHC class I chain-related protein A (MICA) gene, MICA-020 DE allele, partial cds. XX KW Immunoglobulin superfamily (IgSF); RPI-MH1Like; RPI-MH1Like-Alpha; KW Major histocompatibility superfamily (MhSF); KW related protein of the immune system (RPI); conventional-with-leader; KW regular; cDNA; undefined; functional; L-nt-sequence. XX OS Homo sapiens (human) OC cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; OC Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; OC Euteleostomi; Sarcopterygii; Dipnotetrapodomorpha; Tetrapoda; Amniota; OC Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; OC Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; OC Homo; Homo sapiens. XX RN [1] RP 1-822 RA Ishikawa Y., Wakui M.K.; RT ; RL Submitted (15-JUN-1998) to the INSDC. RL Yoshihide Ishikawa, Japanese Red Cross Central Blood Center, Department of RL Research; 4-1-31 Hiroo, Shibuya-Ku, Tokyo 150-0012, Japan RL (E-mail:ishikawa@hla.cbc.jrc.or.jp, Tel:+81-3-3406-1211, RL Fax:+81-3-3406-7892) XX RN [2] RP 1-822 RA Fodil N., Pellet P., Theodorou I., Bahram S.; RT ; RL Submitted (21-SEP-1998) to the INSDC. RL Centre de Recherche d'Immunologie et d'Hematologie, Faculte de Medecine, 4 RL rue Kirschleger, Strasbourg 67085, France XX DR ENA; AF097406. DR IMGT/HLA; HLA01397; MICA*00902. XX CC IMGT/LIGM-DB annotation level: by annotators XX FH Key Location/Qualifiers FH FT L-nt-SEQUENCE <1..>822 FT /partial FT /allele_alias="HLA-DB allele name: MICA*00902" FT /chromosome="6" FT /db_xref="taxon:9606" FT /functional FT /IMGT_allele="MICA*56" FT /IMGT_gene="MICA" FT /IMGT_map="6p21.33" FT /organism="Homo sapiens" FT L-CODING-REGION <1..>822 FT /partial FT /translation="EPHSLRYNLTVLSWDGSVQSGFLAEVHLDGQPFLRYDRQKC FT RAKPQGQWAEDVLGNKTWDRETRDLTGNGKDLRMTLAHIKDQKEGLHSLQEIRVC FT EIHEDNSTRSSQHFYYDGELFLSQNVETEEWTVPQSSRAQTLAMNVRNFLKEDAM FT KTKTHYHAMHADCLQELRRYLESSVVLRRTVPPMVNVTRSEASEGNITVTCRASS FT FYPRNITLTWRQDGVSLSHDTQQWGDVLPDGNGTYQTWVATRICQGEEQRFTCYM FT EHSGNHSTHPVPS" FT /db_xref="GOA:Q29983" FT /db_xref="GOA:Q9TQ86" FT /db_xref="HGNC:7090" FT /db_xref="InterPro:IPR001039" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR011161" FT /db_xref="InterPro:IPR013783" FT /db_xref="PDB:1B3J" FT /db_xref="PDB:1HYR" FT /db_xref="UniProtKB/Swiss-Prot:Q29983" FT /protein_id="AAD27009.1" FT G-ALPHA1-LIKE 1..255 FT /translation="EPHSLRYNLTVLSWDGSVQSGFLAEVHLDGQPFLRYDRQKC FT RAKPQGQWAEDVLGNKTWDRETRDLTGNGKDLRMTLAHIKDQKE" FT /AA_IMGT="AA 1 to 86, AA 40 and 41 are missing, AA 54A FT is present" FT /IMGT_note="encoded by EX2" FT G-ALPHA2-LIKE 256..543 FT /translation="GLHSLQEIRVCEIHEDNSTRSSQHFYYDGELFLSQNVETEE FT WTVPQSSRAQTLAMNVRNFLKEDAMKTKTHYHAMHADCLQELRRYLESSVVLRRT FT " FT /AA_IMGT="AA 1 to 92, AA 17, 40, 41 and 87 are FT missing, AA 49.1 to 49.5, 61A, 61B and 72A are present" FT /IMGT_note="encoded by EX3" FT SPLICE-FIRST-CODON 256..258 FT /splicing-frame="sf1" FT C-LIKE 544..822 FT /translation="VPPMVNVTRSEASEGNITVTCRASSFYPRNITLTWRQDGVS FT LSHDTQQWGDVLPDGNGTYQTWVATRICQGEEQRFTCYMEHSGNHSTHPVPS" FT /AA_IMGT="AA 1.1 to 123, AA 14 to 16, 31, 34, 94 to 96 FT and 110 to 113 are missing, AA 1.1, 45.1 to 45.6, 84.1 FT to 84.4, 85.4 to 85.1 are present" FT /IMGT_note="encoded by EX4" FT SPLICE-FIRST-CODON 544..546 FT /splicing-frame="sf1" XX SQ Sequence 822 BP; 215 A; 219 C; 233 G; 155 T; 0 other; gagccccaca gtcttcgtta taacctcacg gtgctgtcct gggatggatc tgtgcagtca 60 gggtttcttg ctgaggtaca tctggatggt cagcccttcc tgcgctatga caggcagaaa 120 tgcagggcaa agccccaggg acagtgggca gaagatgtcc tgggaaataa gacatgggac 180 agagagacca gggacttgac agggaacgga aaggacctca ggatgaccct ggctcatatc 240 aaggaccaga aagaaggctt gcattccctc caggagatta gggtctgtga gatccatgaa 300 gacaacagca ccaggagctc ccagcatttc tactatgatg gggagctctt cctctcccaa 360 aacgtggaga ctgaggaatg gacagtgccc cagtcctcca gagctcagac cttggccatg 420 aacgtcagga atttcttgaa ggaagatgcc atgaagacca agacacacta tcacgctatg 480 catgcagact gcctgcagga actacggcga tatctagaat ccagcgtagt cctgaggaga 540 acagtgcccc ccatggtgaa tgtcacccgc agcgaggcct cagagggcaa catcaccgtg 600 acatgcaggg cttccagctt ctatccccgg aatatcacac tgacctggcg tcaggatggg 660 gtatctttga gccacgacac ccagcagtgg ggggatgtcc tgcctgatgg gaatggaacc 720 taccagacct gggtggccac caggatttgc caaggagagg agcagaggtt cacctgctac 780 atggaacaca gcgggaatca cagcactcac cctgtgccct ct 822 //