Dbfetch
ID AF097403; SV 1; linear; cDNA; STD; HUM; 822 BP. XX AC AF097403; XX DT 29-MAR-2011 (Rel. 201113-2, arrived in LIGM-DB) DT 18-DEC-2012 (Rel. 201251-2, Last updated, Version 4) XX DE Homo sapiens MHC class I chain-related protein A (MICA) gene, MICA-017 DE allele, partial cds. XX KW Immunoglobulin superfamily (IgSF); RPI-MH1Like; RPI-MH1Like-Alpha; KW Major histocompatibility superfamily (MhSF); KW related protein of the immune system (RPI); conventional-with-leader; KW regular; cDNA; undefined; functional; L-nt-sequence. XX OS Homo sapiens (human) OC cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; OC Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; OC Euteleostomi; Sarcopterygii; Dipnotetrapodomorpha; Tetrapoda; Amniota; OC Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; OC Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; OC Homo; Homo sapiens. XX RN [1] RP 1-822 RA Ishikawa Y., Wakui M.K.; RT ; RL Submitted (15-JUN-1998) to the INSDC. RL Yoshihide Ishikawa, Japanese Red Cross Central Blood Center, Department of RL Research; 4-1-31 Hiroo, Shibuya-Ku, Tokyo 150-0012, Japan RL (E-mail:ishikawa@hla.cbc.jrc.or.jp, Tel:+81-3-3406-1211, RL Fax:+81-3-3406-7892) XX RN [2] RP 1-822 RA Fodil N., Pellet P., Theodorou I., Bahram S.; RT ; RL Submitted (21-SEP-1998) to the INSDC. RL Centre de Recherche d'Immunologie et d'Hematologie, Faculte de Medecine, 4 RL rue Kirschleger, Strasbourg 67085, France XX DR ENA; AF097403. DR IMGT/HLA; HLA01335; MICA*017. XX CC IMGT/LIGM-DB annotation level: by annotators XX FH Key Location/Qualifiers FH FT L-nt-SEQUENCE <1..>822 FT /partial FT /allele_alias="HLA-DB allele name: MICA*017" FT /chromosome="6" FT /db_xref="taxon:9606" FT /functional FT /IMGT_allele="MICA*17" FT /IMGT_gene="MICA" FT /IMGT_map="6p21.33" FT /organism="Homo sapiens" FT L-CODING-REGION <1..>822 FT /partial FT /translation="EPHSLRYNLTVLSGDGSVQSGFLAEVHLDGQPFLRCDRQKC FT RAKPQGQWAEDVLGNKTWDRETRDLTGNGKDLRMTLAHIKDQKEGLHSLREIRVC FT EIHEDNSTRSSQHFYYDGELFLSQNLETEEWTMPQSSRAQTLAMNVRNFLKEDAM FT KTKTHYHAMHADCLQELRRYLKSGVVLRRTVPPMVNVTRSEASEGNITVTCRASG FT FYPWNITLSWRQDGVSLSHDTQQWGDVLPDGNGTYQTWVATRICQGEEQRFTCYM FT EHSGNHSTHPVPS" FT /db_xref="GOA:Q29983" FT /db_xref="GOA:Q9TQ89" FT /db_xref="HGNC:7090" FT /db_xref="InterPro:IPR001039" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR011161" FT /db_xref="InterPro:IPR013783" FT /db_xref="PDB:1B3J" FT /db_xref="PDB:1HYR" FT /db_xref="UniProtKB/Swiss-Prot:Q29983" FT /protein_id="AAD27006.1" FT G-ALPHA1-LIKE 1..255 FT /translation="EPHSLRYNLTVLSGDGSVQSGFLAEVHLDGQPFLRCDRQKC FT RAKPQGQWAEDVLGNKTWDRETRDLTGNGKDLRMTLAHIKDQKE" FT /AA_IMGT="AA 1 to 86, AA 40 and 41 are missing, AA 54A FT is present" FT /IMGT_note="encoded by EX2" FT G-ALPHA2-LIKE 256..543 FT /translation="GLHSLREIRVCEIHEDNSTRSSQHFYYDGELFLSQNLETEE FT WTMPQSSRAQTLAMNVRNFLKEDAMKTKTHYHAMHADCLQELRRYLKSGVVLRRT FT " FT /AA_IMGT="AA 1 to 92, AA 17, 40, 41 and 87 are FT missing, AA 49.1 to 49.5, 61A, 61B and 72A are present" FT /IMGT_note="encoded by EX3" FT SPLICE-FIRST-CODON 256..258 FT /splicing-frame="sf1" FT C-LIKE 544..821 FT /translation="VPPMVNVTRSEASEGNITVTCRASGFYPWNITLSWRQDGVS FT LSHDTQQWGDVLPDGNGTYQTWVATRICQGEEQRFTCYMEHSGNHSTHPVP" FT /AA_IMGT="AA 1.1 to 123, AA 14 to 16, 31, 34, 94 to 96 FT and 110 to 113 are missing, AA 1.1, 45.1 to 45.6, 84.1 FT to 84.4, 85.4 to 85.1 are present" FT /IMGT_note="encoded by EX4" FT SPLICE-FIRST-CODON 544..546 FT /splicing-frame="sf1" XX SQ Sequence 822 BP; 213 A; 218 C; 236 G; 155 T; 0 other; gagccccaca gtcttcgtta taacctcacg gtgctgtccg gggatggatc tgtgcagtca 60 gggtttctcg ctgaggtaca tctggatggt cagcccttcc tgcgctgtga caggcagaaa 120 tgcagggcaa agccccaggg acagtgggca gaagatgtcc tgggaaataa gacatgggac 180 agagagacca gggacttgac agggaacgga aaggacctca ggatgaccct ggctcatatc 240 aaggaccaga aagaaggctt gcattccctc cgggagatta gggtctgtga gatccatgaa 300 gacaacagca ccaggagctc ccagcatttc tactacgatg gggagctctt cctctcccaa 360 aacctggaga ctgaggaatg gacaatgccc cagtcctcca gagctcagac cttggccatg 420 aacgtcagga atttcttgaa ggaagatgcc atgaagacca agacacacta tcacgctatg 480 catgcagact gcctgcagga actacggcga tatctaaaat ccggcgtagt cctgaggaga 540 acagtgcccc ccatggtgaa tgtcacccgc agcgaggcct cagagggcaa cattaccgtg 600 acatgcaggg cttctggctt ctatccctgg aatatcacac tgagctggcg tcaggatggg 660 gtatctttga gccacgacac ccagcagtgg ggggatgtcc tgcctgatgg gaatggaacc 720 taccagacct gggtggccac caggatttgc caaggagagg agcagaggtt cacctgctac 780 atggaacaca gcgggaatca cagcactcac cctgtgccct ct 822 //