Dbfetch

Dbfetch

ID   HLA08976; SV 1; standard; DNA; HUM; 546 BP.
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AC   HLA08976;
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SV   HLA08976.1
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DT   31-DEC-2012 (Rel. 3.11.0, Created, Version 1)
DT   16-JAN-2024 (Rel. 3.55.0, Last Updated, Version 1)
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DE   HLA-B*40:231, Human MHC Class I sequence (partial)
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KW   Human MHC; HLA; Class I; HLA-B; Allele; HLA-B*40:231;
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OS   Homo Sapiens (human)
OC   Eukaryota; Metazoa; Chordata; Vertebrata; Mammalia; Eutheria; Primates;
OC   Catarrhini; Hominidae; Homo.
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CC   --------------------------------------------------------------------------
CC   IPD-IMGT/HLA Release Version 3.55.0
CC   --------------------------------------------------------------------------
CC   Copyrighted by the IPD-IMGT/HLA Database, Distributed under the Creative
CC   Commons Attribution-NoDerivs License, see;
CC   http://www.ebi.ac.uk/ipd/imgt/hla/licence/ for further details.
CC   --------------------------------------------------------------------------
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RN   [1]
RP   1-546
RX   PUBMED; 26812061.
RA   Hernandez-Frederick C, Cereb N, Giani AS, Ruppel J, Maraszek A, Pingel J,
RA   Sauter J, Schmidt AH, Yang SY;
RT   "Detection of 549 new HLA alleles in potential stem cell donors from the
RT   United States, Poland and Germany.";
RL   HLA 87:31-35(2016).
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CC   --------------------------------------------------------------------------
CC   The sequence below is the official allele sequence as approved by the
CC   WHO Nomenclature Committee for Factors of the HLA System.
CC   Any cross references may differ from the sequence shown below.
CC   --------------------------------------------------------------------------
XX
DR   EMBL; JX441347; JX441347.1.
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FH   Key             Location/Qualifiers
FH
FT   source          1..546
FT                   /organism="Homo sapiens"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:9606"
FT                   /ethnic="Undefined"
FT                   /cell_line="HG00005217"
FT   CDS             join(<1..270,271..546)
FT                   /codon_start=3
FT                   /partial
FT                   /gene="HLA-B"
FT                   /allele="HLA-B*40:231"
FT                   /product="MHC Class I HLA-B*40:231 sequence"
FT                   /translation="SHSMRYFHTAMSRPGRGEPRFITVGYVDDTLFVRFDSDATSPRKE
FT                   PRAPWIEQEGPEYWDRETQISKTNTQTYRESLRNLRGYYNQSEAGSHTLQRMYGCDVGP
FT                   DGRLLRGHNQYAYDGKDYIALNEDLRSWTAADTAAQISQRKWEAARVAEQDRAYLEGEC
FT                   VEWLRRYLENGKDKLERA"
FT   exon            1..270
FT                   /number="2"
FT   exon            271..546
FT                   /number="3"
SQ   Sequence 546 BP; 114 A; 172 C; 190 G; 70 T; 0 other;
     gctcccactc catgaggtat ttccacaccg ccatgtcccg gcccggccgc ggggagcccc        60
     gcttcatcac cgtgggctac gtggacgaca cgctgttcgt gaggttcgac agcgacgcca       120
     cgagtccgag gaaggagccg cgggcgccat ggatagagca ggaggggccg gagtattggg       180
     accgggagac acagatctcc aagaccaaca cacagactta ccgagagagc ctgcggaacc       240
     tgcgcggcta ctacaaccag agcgaggccg ggtctcacac cctccagagg atgtacggct       300
     gcgacgtggg gccggacggg cgcctcctcc gcgggcataa ccagtacgcc tacgacggca       360
     aggattacat cgccctgaac gaggacctgc gctcctggac cgccgcggac acggcggctc       420
     agatctccca gcgcaagtgg gaggcggccc gtgtggcgga gcaggacaga gcctacctgg       480
     agggcgagtg cgtggagtgg ctccgcagat acctggagaa cgggaaggac aagctggagc       540
     gcgctg                                                                  546
//