Dbfetch

Dbfetch

ID   HLA08604; SV 1; standard; DNA; HUM; 552 BP.
XX
AC   HLA08604;
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SV   HLA08604.1
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DT   30-SEP-2012 (Rel. 3.10.0, Created, Version 1)
DT   16-JAN-2024 (Rel. 3.55.0, Last Updated, Version 1)
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DE   HLA-DRB1*01:50, Human MHC Class II sequence (partial)
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KW   Human MHC; HLA; Class II; HLA-DRB1; Allele; HLA-DRB1*01:50;
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OS   Homo Sapiens (human)
OC   Eukaryota; Metazoa; Chordata; Vertebrata; Mammalia; Eutheria; Primates;
OC   Catarrhini; Hominidae; Homo.
XX
CC   --------------------------------------------------------------------------
CC   IPD-IMGT/HLA Release Version 3.55.0
CC   --------------------------------------------------------------------------
CC   Copyrighted by the IPD-IMGT/HLA Database, Distributed under the Creative
CC   Commons Attribution-NoDerivs License, see;
CC   http://www.ebi.ac.uk/ipd/imgt/hla/licence/ for further details.
CC   --------------------------------------------------------------------------
XX
RN   [1]
RP   1-552
RX   PUBMED; 23611661.
RA   Swelsen W, Hartog KS, Lardy NM;
RT   "Identification of two HLA class II alleles: DRB1*01:50 and DQB1*05:18.";
RL   Tissue Antigens 82:78-79(2013).
XX
CC   --------------------------------------------------------------------------
CC   The sequence below is the official allele sequence as approved by the
CC   WHO Nomenclature Committee for Factors of the HLA System.
CC   Any cross references may differ from the sequence shown below.
CC   --------------------------------------------------------------------------
XX
DR   EMBL; HE983354; HE983354.1.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..552
FT                   /organism="Homo sapiens"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:9606"
FT                   /ethnic="Undefined"
FT                   /cell_line="10-72-1133"
FT   CDS             join(<1..270,271..552)
FT                   /codon_start=3
FT                   /partial
FT                   /gene="HLA-DRB1"
FT                   /allele="HLA-DRB1*01:50"
FT                   /product="MHC Class II HLA-DRB1*01:50 sequence"
FT                   /translation="RFLWQLKFECHFFNGTERVRLLERCIYNQEESVRFDSDVGEYRAV
FT                   TELGRPDAEYWNSQKDLLEQRRAAVDTYCRHNYGVGESFTVQRRVEPKVTVYPSKTQPL
FT                   HHHNLLVCSVSGFYPGSIEVRWFRNGQEEKAGVVSTGLIQNGDWTFQTLVMLETVPRSG
FT                   EVYTCQVEHPSVTSPLTVEW"
FT   exon            1..270
FT                   /number="2"
FT   exon            271..552
FT                   /number="3"
SQ   Sequence 552 BP; 123 A; 135 C; 183 G; 111 T; 0 other;
     cacgtttctt gtggcagctt aagtttgaat gtcatttctt caatgggacg gagcgggtgc        60
     ggttgctgga aagatgcatc tataaccaag aggagtccgt gcgcttcgac agcgacgtgg       120
     gggagtaccg ggcggtgacg gagctggggc ggcctgatgc cgagtactgg aacagccaga       180
     aggacctcct ggagcagagg cgggccgcgg tggacaccta ctgcagacac aactacgggg       240
     ttggtgagag cttcacagtg cagcggcgag ttgagcctaa ggtgactgtg tatccttcaa       300
     agacccagcc cctgcaccac cacaacctcc tggtctgctc tgtgagtggt ttctatccag       360
     gcagcattga agtcaggtgg ttccggaacg gccaggaaga gaaggctggg gtggtgtcca       420
     caggcctgat ccagaatgga gattggacct tccagaccct ggtgatgctg gaaacagttc       480
     ctcggagtgg agaggtttac acctgccaag tggagcaccc aagtgtgacg agccctctca       540
     cagtggaatg ga                                                           552
//