Dbfetch
ID HLA05576; SV 2; standard; DNA; HUM; 4303 BP. XX AC HLA05576; XX SV HLA05576.2 XX DT 31-AUG-2010 (Rel. 3.2.0, Created, Version 1) DT 16-JAN-2024 (Rel. 3.55.0, Last Updated, Version 2) XX DE HLA-C*06:49N, Human MHC Class I sequence XX KW Human MHC; HLA; Class I; HLA-C; Allele; HLA-C*06:49N; XX OS Homo Sapiens (human) OC Eukaryota; Metazoa; Chordata; Vertebrata; Mammalia; Eutheria; Primates; OC Catarrhini; Hominidae; Homo. XX CC -------------------------------------------------------------------------- CC IPD-IMGT/HLA Release Version 3.55.0 CC -------------------------------------------------------------------------- CC Copyrighted by the IPD-IMGT/HLA Database, Distributed under the Creative CC Commons Attribution-NoDerivs License, see; CC http://www.ebi.ac.uk/ipd/imgt/hla/licence/ for further details. CC -------------------------------------------------------------------------- XX RN [1] RP 1-4303 RX PUBMED; 24571476. RA Hernandez-Frederick CJ, Giani AS, Cereb N, Silva-Gozalez R, Pingel J, RA Schmidt AH, Ehninger G, Yang SY; RT "Identification of 2127 new HLA class I alleles in potential stem cell RT donors from Germany, the United States and Poland."; RL Tissue Antigens 83:184-189(2014). XX CC -------------------------------------------------------------------------- CC The sequence below is the official allele sequence as approved by the CC WHO Nomenclature Committee for Factors of the HLA System. CC Any cross references may differ from the sequence shown below. CC -------------------------------------------------------------------------- XX DR EMBL; GQ161029; GQ161029.1. DR EMBL; HM768866; HM768866.1. DR EMBL; ON417744; ON417744.1. XX FH Key Location/Qualifiers FH FT source 1..4303 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /db_xref="taxon:9606" FT /ethnic="African, African descent, Undefined" FT /cell_line="HG00001540" FT /cell_line="HN-70256-7" FT /cell_line="JH0026" FT CDS join(496..568,699..968,1215..1490,2078..2353,2475..2594, FT 3034..3066,3174..3221,3386..3390) FT /codon_start=1 FT /gene="HLA-C" FT /allele="HLA-C*06:49N" FT /product="MHC Class I HLA-C*06:49N sequence" FT /translation="MRVMAPRTLILLLSGALALTETWACSHSMRYFDTAVSRPGRGEPR FT FISVGYVDDTQFVRFDSDAASPRGEPRAPWVEQEGPEYWDRETQKYKRQAQADRVNLRK FT LRGYYNQSEDGSHTLQWMYGX" FT UTR 1..495 FT exon 496..568 FT /number="1" FT intron 569..698 FT /number="1" FT exon 699..968 FT /number="2" FT intron 969..1214 FT /number="2" FT exon 1215..1490 FT /number="3" FT intron 1491..2077 FT /number="3" FT exon 2078..2353 FT /number="4" FT intron 2354..2474 FT /number="4" FT exon 2475..2594 FT /number="5" FT intron 2595..3033 FT /number="5" FT exon 3034..3066 FT /number="6" FT intron 3067..3173 FT /number="6" FT exon 3174..3221 FT /number="7" FT intron 3222..3385 FT /number="7" FT exon 3386..3390 FT /number="8" FT UTR 3391..4303 SQ Sequence 4303 BP; 835 A; 1206 C; 1296 G; 966 T; 0 other; ttattttgct ggatgtagtt taatattacc tgaggtaagg taaggcaaag agtgggaggc 60 agggagtcca gttcagggac ggggattcca ggagaagtga aggggaaggg gctgggcgca 120 gcctgggggt ctctccctgg tttccacaga cagatccttg gccaggactc aggcacacag 180 tgtgacaaag atgcttggtg taggagaaga gggatcagga cgaagtccca ggtcccgggc 240 ggggctctca gggtctcagg ctccaagggc cgtgtctgca ctggggaggc gccgcgttga 300 ggattctcca ctcccctgag tttcacttct tctcccaacc tgcgtcgggt ccttcttcct 360 gaatactcat gacgcgtccc caattcccac tcccattggg tgtcgggttc tagagaagcc 420 aatcagcgtc tccgcagtcc cggttctaaa gtccccagtc acccacccgg actcggattc 480 tccccagacg ccgagatgcg ggtcatggcg ccccgaaccc tcatcctgct gctctcggga 540 gccctggccc tgaccgagac ctgggcctgt gagtgcgggg ttgggaggga aacggcctct 600 gcggagagga gcgaggggcc cgcccggcga gggcgcagga cccggggagc cgcgcaggga 660 ggagggtcgg gcgggtctca gcccctcctc gcccccaggc tcccactcca tgaggtattt 720 cgacaccgcc gtgtcccggc ccggccgcgg agagccccgc ttcatctcag tgggctacgt 780 ggacgacacg cagttcgtgc ggttcgacag cgacgccgcg agtccgagag gggagccccg 840 ggcgccgtgg gtggagcagg aggggccgga gtattgggac cgggagacac agaagtacaa 900 gcgccaggca caggctgacc gagtgaacct gcggaaactg cgcggctact acaaccagag 960 cgaggacggt gagtgacccc ggcccggggc gcaggtcacg acccctcccc atcccccacg 1020 gacggcccgg gtcgccccga gtctcccggt ctgagatcca ccccgaggct gcggaacccg 1080 cccagaccct cgaccggaga gagccccagt cacctttacc cggtttcatt ttcagtttag 1140 gccaaaatcc ccgcgggttg gtcggggctg gggcggggct cgggggacgg ggctgaccac 1200 gggggcgggg ccagggtctc acaccctcca gtggatgtat ggctgagacc tggggcccga 1260 cgggcgcctc ctccgcgggt atgaccagtc cgcctacgac ggcaaggatt acatcgccct 1320 gaacgaggac ctgcgctcct ggaccgccgc ggacacggcg gctcagatca cccagcgcaa 1380 gtgggaggcg gcccgtgagg cggagcagtg gagagcctac ctggagggca cgtgcgtgga 1440 gtggctccgc agatacctgg agaacgggaa ggagacgctg cagcgcgcgg gtaccagggg 1500 cagtggggag ccttccccat ctcctgtaga tctcccggga tggcctccca cgaggagggg 1560 aggaaaatgg gatcagcgct agaatatcgc cctcccttga atggagaatg ggatgagttt 1620 tcctgagttt cctctgaggg ccccctctgc tctctaggac aattaaggga tgaagtcctt 1680 gaggaaatgg aggggaagac agtccctgga atactgatca ggggtcccct ttgaccactt 1740 tgaccactgc agcagctgtg gtcaggctgc tgacctttct ctcaggcctt gttctctgcc 1800 tcacgctcaa tgtgtttaaa ggtttgattc cagcttttct gagtccttcg gcctccactc 1860 aggtcaggac cagaagtcgc tgttcctccc tcagagacta gaactttcca atgaatagga 1920 gattatccca ggtgcctgtg tccaggctgg cgtctgggtt ctgtgccccc ttccccaccc 1980 caggtgtcct gtccattctc aggatggtca catgggcgct gttggagtgt cgcaagagag 2040 atacaaagtg tctgaatttt ctgactcttc ccgtcagaac acccaaagac acacgtgacc 2100 caccatcccg tctctgacca tgaggccacc ctgaggtgct gggccctggg cttctaccct 2160 gcggagatca cactgacctg gcagcgggat ggcgaggacc aaactcagga caccgagctt 2220 gtggagacca ggccagcagg agatggaacc ttccagaagt gggcagctgt ggtggtgcct 2280 tctggagaag agcagagata cacgtgccat gtgcagcacg aggggctgcc agagcccctc 2340 accctgagat ggggtaagga gggggatgag gggtcatgtg tcttctcagg gaaagcagaa 2400 gtcctggagc ccttcagccg ggtcagggct gaggcttggg ggtcagggcc cctcaccttc 2460 ccctcctttc ccagagccat cttcccagcc caccatcccc atcgtgggca tcgttgctgg 2520 cctggctgtc ctggctgtcc tagctgtcct aggagctgtg atggctgttg tgatgtgtag 2580 gaggaagagc tcaggtaggg aaggggtgag gagtggggtc tgggttttct tgtcccactg 2640 ggagtttcaa gccccaggta gaagtgtgcc ccacctcgtt actggaagca ccatccacac 2700 atgggccatc ccagcctggg accctgtgtg ctagcactta ctctgttgtg aagcacatga 2760 caatgaagga cagatgtatc accttgatga ttatggtgtt ggggtccttg attccagcat 2820 tcatgagtca ggggaaggtc cctgctaagg acagacctta ggagggcagt tgctccagaa 2880 cccacagctg ctttccccgt gtttcctgat cctgccctgg gtctgcagtc atagttctgg 2940 aaacttctct tgggtccaag actaggaggt tcccctaaga tcgcatggcc ctgcctcctc 3000 cctgtcccct cacagggcat tttcttccca caggtggaaa aggagggagc tgctctcagg 3060 ctgcgtgtaa gtgatggcgg tgggcgtgtg gaggagctca cccaccccat aattcctctt 3120 gtcccacatc tcctgcgggc tctgaccagg tctttttttt tgttctaccc cagccagcaa 3180 cagtgcccag ggctctgatg agtctctcat cgcttgtaaa ggtgagattc tggggagctg 3240 aagtggtctg gggtggggca gagggaaaag gcctaggtaa tggggatcct ttgattggga 3300 cgtttcgaat gtgtggtgag ctgttcagag tgtcatcact taccatgact gacctgaatt 3360 tgttcatgac tattgtgttc tgtagcctga gacagctgcc tgtgtgggac tgagatgcag 3420 gatttcttca cacctctcct ttgtgacttc aagagcctct ggcatctctt tctgcaaagg 3480 catctgaatg tgtctgcgtt cctgttagca taatgtgagg aggtggagag acagcccacc 3540 cccgtgtcca ccgtgacccc tgtccccaca ctgacctgtg ttccctcccc gatcatcttt 3600 cctgttccag agaagtgggc tggatgtctc catctctgtc tcaactttac gtgtactgag 3660 ctgcaacttc ttacttccct actgaaaata agaatctgaa tataaatttg ttttctcaaa 3720 tatttgctat gagaggttga tggattaatt aaataagtca attcctggaa gttgagagag 3780 caaataaaga cctgagaacc ttccagaatc cgcatgttcg ctgtgctgag tctgttgcag 3840 gtgggggtgg ggaaggctgt gaggagacga gtgtggacgg ggcctgtgcc tagttgctgt 3900 tcagttcttc atgggcttta tgtggtcagt cctcagctgg gtcaccttca ctgctccatt 3960 gtccttgtcc cttcagtgga aacttgtcca gcgggagctg tgaccacaga ggctcacaca 4020 tcgcccaggg cagcccctgc acacgggagt ccctgtgctt tctgagacaa attttcagac 4080 ccagtcagct cctgccctcc ttctagggct cctcttctgc tttggtctcc tgtcctctct 4140 cccttccctg attccagtaa tcttcgtgct gactccaatc ccaactcatg aatctaaagc 4200 agagcctaat ttagatttat atttgtttgt aaaattgggt ccatagtcta gaattgttcc 4260 ttcctgaaga gagaaacctg atcgtgtgct gcagtgtgcg ggg 4303 //