Dbfetch
ID HLA05004; SV 1; standard; DNA; HUM; 822 BP. XX AC HLA05004; XX SV HLA05004.1 XX DT 30-APR-2010 (Rel. 3.1.0, Created, Version 1) DT 16-JAN-2024 (Rel. 3.55.0, Last Updated, Version 1) XX DE HLA-A*02:227N, Human MHC Class I sequence (partial) XX KW Human MHC; HLA; Class I; HLA-A; Allele; HLA-A*02:227N; XX OS Homo Sapiens (human) OC Eukaryota; Metazoa; Chordata; Vertebrata; Mammalia; Eutheria; Primates; OC Catarrhini; Hominidae; Homo. XX CC -------------------------------------------------------------------------- CC IPD-IMGT/HLA Release Version 3.55.0 CC -------------------------------------------------------------------------- CC Copyrighted by the IPD-IMGT/HLA Database, Distributed under the Creative CC Commons Attribution-NoDerivs License, see; CC http://www.ebi.ac.uk/ipd/imgt/hla/licence/ for further details. CC -------------------------------------------------------------------------- XX RN [1] RP 1-822 RX PUBMED; 22994261. RA Lin W, Zhang Z, Shan X, Liu N, Ni L; RT "Identification of a novel HLA-A allele HLA-A*02:227N."; RL Tissue Antigens 81:46-47(2013). XX RN [2] RP 1-822 RX PUBMED; 24571476. RA Hernandez-Frederick CJ, Giani AS, Cereb N, Silva-Gozalez R, Pingel J, RA Schmidt AH, Ehninger G, Yang SY; RT "Identification of 2127 new HLA class I alleles in potential stem cell RT donors from Germany, the United States and Poland."; RL Tissue Antigens 83:184-189(2014). XX CC -------------------------------------------------------------------------- CC The sequence below is the official allele sequence as approved by the CC WHO Nomenclature Committee for Factors of the HLA System. CC Any cross references may differ from the sequence shown below. CC -------------------------------------------------------------------------- XX DR EMBL; FJ887805; FJ887805.1. DR EMBL; FJ887806; FJ887806.1. DR EMBL; GU474372; GU474372.1. DR EMBL; HM467587; HM467587.1. DR EMBL; JN119367; JN119367.1. XX FH Key Location/Qualifiers FH FT source 1..822 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /db_xref="taxon:9606" FT /ethnic="Asian, Undefined" FT /cell_line="BJ09ZBJ" FT /cell_line="HG00001979" FT /cell_line="HG00002972" FT /cell_line="HN-56826-3" FT /cell_line="HN-83983-6" FT CDS join(<1..270,271..546,547..822) FT /codon_start=3 FT /partial FT /gene="HLA-A" FT /allele="HLA-A*02:227N" FT /product="MHC Class I HLA-A*02:227N sequence" FT /translation="SHSMRYFFTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRME FT PRAPWIEQEGPEYWDGETRKVKAHSQTHRVDLGTLRGYYNQSEAGSHTVQRMYGCDVGS FT DWRFLRGYHQYAYDGKDYIALKEDLRSWTAADMAAQTTKHKWEAAHVAEQLRAYLEGTC FT VEWLRRYLENGKETLX" FT exon 1..270 FT /number="2" FT exon 271..546 FT /number="3" FT exon 547..822 FT /number="4" SQ Sequence 822 BP; 171 A; 243 C; 282 G; 126 T; 0 other; gctctcactc catgaggtat ttcttcacat ccgtgtcccg gcccggccgc ggggagcccc 60 gcttcatcgc agtgggctac gtggacgaca cgcagttcgt gcggttcgac agcgacgccg 120 cgagccagag gatggagccg cgggcgccgt ggatagagca ggagggtccg gagtattggg 180 acggggagac acggaaagtg aaggcccact cacagactca ccgagtggac ctggggaccc 240 tgcgcggcta ctacaaccag agcgaggccg gttctcacac cgtccagagg atgtatggct 300 gcgacgtggg gtcggactgg cgcttcctcc gcgggtacca ccagtacgcc tacgacggca 360 aggattacat cgccctgaaa gaggacctgc gctcttggac cgcggcggac atggcagctc 420 agaccaccaa gcacaagtgg gaggcggccc atgtggcgga gcagttgaga gcctacctgg 480 agggcacgtg cgtggagtgg ctccgcagat acctggagaa cgggaaggag acgctgtagc 540 gcacggacgc ccccaaaacg catatgactc accacgctgt ctctgaccat gaagccaccc 600 tgaggtgctg ggccctgagc ttctaccctg cggagatcac actgacctgg cagcgggatg 660 gggaggacca gacccaggac acggagctcg tggagaccag gcctgcaggg gatggaacct 720 tccagaagtg ggcggctgtg gtggtgcctt ctggacagga gcagagatac acctgccatg 780 tgcagcatga gggtttgccc aagcccctca ccctgagatg gg 822 //