Dbfetch
ID HLA01430; SV 1; standard; DNA; HUM; 3852 BP. XX AC HLA01430; XX SV HLA01430.1 XX DT 31-JAN-2001 (Rel. 1.10.0, Created, Version 1) DT 16-JAN-2024 (Rel. 3.55.0, Last Updated, Version 1) XX DE HLA-B*40:06:01:02, Human MHC Class I sequence XX KW Human MHC; HLA; Class I; HLA-B; Allele; HLA-B*40:06:01:02; XX OS Homo Sapiens (human) OC Eukaryota; Metazoa; Chordata; Vertebrata; Mammalia; Eutheria; Primates; OC Catarrhini; Hominidae; Homo. XX CC -------------------------------------------------------------------------- CC IPD-IMGT/HLA Release Version 3.55.0 CC -------------------------------------------------------------------------- CC Copyrighted by the IPD-IMGT/HLA Database, Distributed under the Creative CC Commons Attribution-NoDerivs License, see; CC http://www.ebi.ac.uk/ipd/imgt/hla/licence/ for further details. CC -------------------------------------------------------------------------- XX RN [1] RP 1-3852 RX PUBMED; 12622774. RA Cox ST, McWhinnie AJ, Robinson J, Marsh SGE, Parham P, Madrigal JA, Little RA AM; RT "Cloning and sequencing full-length HLA-B and -C genes."; RL Tissue Antigens 61:20-48(2003). XX RN [2] RP 1-3852 RX PUBMED; 24461007. RA Tilanus MGJ, van Dijk A, van de Velde H, Hepkema B; RT "Gene polymorphism among the HLA-B*40 alleles: identification of a new RT allele polymorphism (HLA-B*40:79) and correlation with the HLA-B60 and B61 RT antigens."; RL Tissue Antigens 82:293-294(2013). XX CC -------------------------------------------------------------------------- CC The sequence below is the official allele sequence as approved by the CC WHO Nomenclature Committee for Factors of the HLA System. CC Any cross references may differ from the sequence shown below. CC -------------------------------------------------------------------------- XX DR EMBL; AJ292253; AJ292253.1. DR EMBL; EU233476; EU233476.1. DR EMBL; LR137030; LR137030.1. DR EMBL; MN395743; MN395743.1. XX FH Key Location/Qualifiers FH FT source 1..3852 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /db_xref="taxon:9606" FT /ethnic="Asian, Hispanic or Latin American, Undefined" FT /cell_line="BY01849" FT /cell_line="DKMS-LSL_ID15926250" FT /cell_line="MT193" FT /cell_line="Terasaki EXT#58" FT CDS join(285..357,487..756,1000..1275,1851..2126,2220..2336, FT 2778..2810,2917..2960) FT /codon_start=1 FT /gene="HLA-B" FT /allele="HLA-B*40:06:01:02" FT /product="MHC Class I HLA-B*40:06:01:02 sequence" FT /translation="MRVTAPRTLLLLLWGAVALTETWAGSHSMRYFHTSVSRPGRGEPR FT FITVGYVDDTLFVRFDSDATSPRKEPRAPWIEQEGPEYWDRETQISKTNTQTYRESLRN FT LRGYYNQSEAGSHTWQTMYGCDVGPDGRLLRGHNQYAYDGKDYIALNEDLRSWTAADTA FT AQITQRKWEAARVAEQLRAYLEGECVEWLRRYLENGKETLQRADPPKTHVTHHPISDHE FT ATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRY FT TCHVQHEGLPKPLTLRWEPSSQSTVPIVGIVAGLAVLAVVVIGAVVAAVMCRRKSSGGK FT GGSYSQAACSDSAQGSDVSLTA" FT UTR 1..284 FT exon 285..357 FT /number="1" FT intron 358..486 FT /number="1" FT exon 487..756 FT /number="2" FT intron 757..999 FT /number="2" FT exon 1000..1275 FT /number="3" FT intron 1276..1850 FT /number="3" FT exon 1851..2126 FT /number="4" FT intron 2127..2219 FT /number="4" FT exon 2220..2336 FT /number="5" FT intron 2337..2777 FT /number="5" FT exon 2778..2810 FT /number="6" FT intron 2811..2916 FT /number="6" FT exon 2917..2960 FT /number="7" FT UTR 2961..3852 SQ Sequence 3852 BP; 723 A; 1087 C; 1189 G; 853 T; 0 other; gatcaggacg aagtcccagg ccccgggcgg ggctctcagg gtctcaggct ccgagagcct 60 tgtctgcatt ggggaggcgc agcattgggg attccccact cccacgagtt tcacttcttc 120 tcccaaccta tgtcgggtcc ttcttccagg atactcgtga cgcgtcccca tttcccactc 180 ccattgggtg tcgggtgtct agagaagcca atcagtgtcg ccggggtccc agttctaaag 240 tccccacgca cccacccgga ctcagaatct cctcagacgc cgagatgcgg gtcacggcgc 300 cccgaaccct cctcctgctg ctctgggggg cagtggccct gaccgagacc tgggctggtg 360 agtgcggggt cggcagggaa atggcctctg tggggaggag cgaggggacc gcaggcgggg 420 gcgcaggacc cggggagccg cgccgggagg agggtcgggc gggtctcagc ccctcctcgc 480 ccccaggctc ccactccatg aggtatttcc acacctccgt gtcccggccc ggccgcgggg 540 agccccgctt catcaccgtg ggctacgtgg acgacacgct gttcgtgagg ttcgacagcg 600 acgccacgag tccgaggaag gagccgcggg cgccatggat agagcaggag gggccggagt 660 attgggaccg ggagacacag atctccaaga ccaacacaca gacttaccga gagagcctgc 720 ggaacctgcg cggctactac aaccagagcg aggccggtga gtgaccccgg cccggggcgc 780 aggtcacgac tccccatccc ccacgtacgg cccgggtcgc cccgagtctc cgggtccgag 840 atccgccccc gaggccgcgg gacccgccca gaccctcgac cggcgagagc cccaggcgcg 900 tttacccggt ttcattttca gttgaggcca aaatccccgc gggttggtcg gggcggggcg 960 gggctcgggg gacggggctg accgcggggc cggggccagg gtctcacact tggcagacga 1020 tgtatggctg cgacgtgggg ccggacgggc gcctcctccg cgggcataac cagtacgcct 1080 acgacggcaa ggattacatc gccctgaacg aggacctgcg ctcctggacc gccgcggaca 1140 cggcggctca gatcacccag cgcaagtggg aggcggcccg tgtggcggag cagctgagag 1200 cctacctgga gggcgagtgc gtggagtggc tccgcagata cctggagaac gggaaggaga 1260 cgctgcagcg cgcgggtacc aggggcagtg gggagccttc cccatctcct ataggtcgcc 1320 ggggatggcc tcccacgaga agaggaggaa aatgggatca gcgctagaat gtcgccctcc 1380 cttgaatgga gaatggcatg agttttcctg agtttcctct gagggccccc tcttctctct 1440 aggacaatta agggatgacg tctctgagga aatggagggg aagacagtcc ctagaatact 1500 gatcaggggt cccctttgac ccctgcagca gccttgggaa ccgtgacttt tcctctcagg 1560 ccttgttctc tgcctcacac tcagtgtgtt tggggctctg attccagcac ttctgagtca 1620 ctttacctcc actcagatca ggagcagaag tccctgttcc ccgctcagag actcgaactt 1680 tccaatgaat aggagattat cccaggtgcc tgcgtccagg ctggtgtctg ggttctgtgc 1740 cccttcccca ccccaggtgt cctgtccatt ctcaggctgg tcacatgggt ggtcctaggg 1800 tgtcccatga gagatgcaaa gcgcctgaat tttctgactc ttcccatcag accccccaaa 1860 gacacacgtg acccaccacc ccatctctga ccatgaggcc accctgaggt gctgggccct 1920 gggcttctac cctgcggaga tcacactgac ctggcagcgg gatggcgagg accaaactca 1980 ggacactgag cttgtggaga ccagaccagc aggagataga accttccaga agtgggcagc 2040 tgtggtggtg ccttctggag aagagcagag atacacatgc catgtacagc atgaggggct 2100 gccgaagccc ctcaccctga gatggggtaa ggagggggat gaggggtcat atctcttctc 2160 agggaaagca ggagcccttc agcagggtca gggcccctca tcttcccttc ctttcccaga 2220 gccgtcttcc cagtccaccg tccccatcgt gggcattgtt gctggcctgg ctgtcctagc 2280 agttgtggtc atcggagctg tggtcgctgc tgtgatgtgt aggaggaaga gctcaggtag 2340 ggaaggggtg aggggtgggg tctgagtttt cttgtcccac tgggggtttc aagccccagg 2400 tagaagtgtt ccctgcctca ttactgggaa gcagcatcca cacaggggct aacgcagcct 2460 gggaccctgt gtgccagaac ttactctttt gtgcagcaca tgtgacaatg aaggacggat 2520 gtatcacctt ggtggttgtg gtgttggggt cctgattcca gcattcatga gtcaggggaa 2580 ggtccctgct aaggacagac cttaggaggg cagttggtcc aggacccaca cttgctttcc 2640 tcgtgtttcc tgatcctgcc ttgggtctgt agtcatactt ctggaaattc cttttgggtc 2700 caagacgagg aggttcctct aagatctcat ggccctgctt cctcccagtc ccctcacagg 2760 gcattttctt cccacaggtg gaaaaggagg gagctactct caggctgcgt gtaagtgatg 2820 ggggtgggag tgtggaggag ctcacccacc ccctaattcc tcctgtccca cgtctcctgc 2880 gggctctgac caggtcctgt ttttgttcta ctccaggcag cgacagtgcc cagggctctg 2940 atgtgtctct cacagcttga aaaggtgaga ttcttggggt ctagagtggg tggggtggca 3000 ggtctggggg tgggtggggc agtggggaaa ggcctgggta atggagattc tttgattggg 3060 atgtttcgcg tgtgtggtgg gctgtttaga ctgtcatcac ttaccatgac taaccagaat 3120 ttgttcatga ctgttgtttt ctgtagcctg agacagctgt cttgtgaggg actgagatgc 3180 aggatttctt cacgcctccc ctttgtgact tcaagagcct ctggcatctc tttctgcaaa 3240 ggcacctgaa tgtgtctgcg tccctgttag cataatgtga ggaggtggag agaccagccc 3300 acccccgtgt ccactgtgac ccctgttccc atgctgacct gtgtttcctc cccagtcatc 3360 tttcctgttc cagagaggtg gggctggatg tctccatctc tgtctcaact ttatgtgcac 3420 tgagctgcaa cttcttactt ccctactgaa aataagaatc tgaatataaa tttgttttct 3480 caaatatttg ctatgagagg ttgatggatt aattaaataa gtcaattcct ggaatttgag 3540 agagcaaata aagacctgag aaccttccag aatctgcatg ttcgctgtgc tgagtctgtt 3600 gcaggtgggg tgtggagaag gctgtggggg gccgagtgtg gacggggcct gtgcccattt 3660 ggtgttgagt ccatcatggg ctttatgtgg ttagtcctca gctgggtcac cttcactgct 3720 ccattgtcct tgtcccttca gtggaaactt gtccagtggg agctgtgacc acagaggctc 3780 acacatcgcc ctgggcggcc cctgcacgcg ggggtctctg tgcattctga gacaaatttt 3840 cagagccatt ca 3852 //