Dbfetch

ID   HLA01046; SV 3; standard; DNA; HUM; 3513 BP.
XX
AC   HLA01046;
XX
SV   HLA01046.3
XX
DT   30-APR-1999 (Rel. 1.3.0, Created, Version 1)
DT   16-JAN-2024 (Rel. 3.55.0, Last Updated, Version 3)
XX
DE   HLA-A*68:12:01, Human MHC Class I sequence
XX
KW   Human MHC; HLA; Class I; HLA-A; Allele; HLA-A*68:12:01;
XX
OS   Homo Sapiens (human)
OC   Eukaryota; Metazoa; Chordata; Vertebrata; Mammalia; Eutheria; Primates;
OC   Catarrhini; Hominidae; Homo.
XX
CC   --------------------------------------------------------------------------
CC   IPD-IMGT/HLA Release Version 3.55.0
CC   --------------------------------------------------------------------------
CC   Copyrighted by the IPD-IMGT/HLA Database, Distributed under the Creative
CC   Commons Attribution-NoDerivs License, see;
CC   http://www.ebi.ac.uk/ipd/imgt/hla/licence/ for further details.
CC   --------------------------------------------------------------------------
XX
RN   [1]
RP   1-3513
RX   PUBMED; 11034565.
RA   Fae I, Gleissner B, Kriks D, Leitner D, Fischer GF;
RT   "Serological and nucleotide sequence analysis of HLA-A*6812.";
RL   Tissue Antigens 56:276-278(2000).
XX
RN   [2]
RP   1-3513
RX   PUBMED; 30117314.
RA   Lazaro A, Hou L, Tu B, Masaberg C, Enriquez E, Gerfen J, Kariyawasam K,
RA   Persaud M, Qin X, Simbulan D, Xiao Y, Xun L, Yang R, Ng J, Hurley CK;
RT   "Full gene HLA class I sequences of 79 novel and 519 mostly uncommon
RT   alleles from a large United States registry population.";
RL   HLA 92:304-309(2018).
XX
RN   [3]
RP   1-3513
RX   PUBMED; 30107213.
RA   Voorter CEM, Matern B, Tran TH, Fink A, Vidan-Jeras B, Montanic S, Fischer
RA   G, Fae I, de Santis D, Whidborne R, Andreani M, Testi M, Groeneweg M,
RA   Tilanus MGJ;
RT   "Full-length extension of HLA allele sequences by HLA allele-specific
RT   hemizygous Sanger sequencing (SSBT).";
RL   Human Immunology 79:763-772(2018).
XX
CC   --------------------------------------------------------------------------
CC   The sequence below is the official allele sequence as approved by the
CC   WHO Nomenclature Committee for Factors of the HLA System.
CC   Any cross references may differ from the sequence shown below.
CC   --------------------------------------------------------------------------
XX
DR   EMBL; AJ238362; AJ238362.1.
DR   EMBL; AJ238363; AJ238363.1.
DR   EMBL; AJ238364; AJ238364.1.
DR   EMBL; EU924803; EU924803.1.
DR   EMBL; LT962902; LT962902.1.
DR   EMBL; MG189570; MG189570.1.
DR   EMBL; MG372828; MG372828.1.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..3513
FT                   /organism="Homo sapiens"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:9606"
FT                   /ethnic="European, Undefined"
FT                   /cell_line="48212_2009-1796"
FT                   /cell_line="KE-GF"
FT                   /cell_line="NT01008"
FT                   /cell_line="NT01564"
FT                   /cell_line="NT01626"
FT   CDS             join(297..369,500..769,1011..1286,1887..2162,2262..2378,
FT                   2817..2849,2992..3039,3209..3213)
FT                   /codon_start=1
FT                   /gene="HLA-A"
FT                   /allele="HLA-A*68:12:01"
FT                   /product="MHC Class I HLA-A*68:12:01 sequence"
FT                   /translation="MAVMAPRTLVLLLSGALALTQTWAGSHSMRYFYTSVSRPGRGEPR
FT                   FIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDRNTRNVKAQSQTDRVDLGT
FT                   LRGYYNQSEAGSHTIQMMYGCDVGSDGRFLRGYRQDAYDGKDYIALKEDLRSWTAADMA
FT                   AQITKHKWEAAHVAEQWRAYLEGTCVEWLRRYLENGKETLQRTDAPKTHMTHHAVSDHE
FT                   ATLRCWALSFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWVAVVVPSGQEQRY
FT                   TCHVQHEGLPKPLTLRWEPSSQPTIPIVGIIAGLVLFGAVITGAVVAAVMWRRKSSDRK
FT                   GGSYSQAASSDSAQGSDVSLTACKV"
FT   UTR             1..296
FT   exon            297..369
FT                   /number="1"
FT   intron          370..499
FT                   /number="1"
FT   exon            500..769
FT                   /number="2"
FT   intron          770..1010
FT                   /number="2"
FT   exon            1011..1286
FT                   /number="3"
FT   intron          1287..1886
FT                   /number="3"
FT   exon            1887..2162
FT                   /number="4"
FT   intron          2163..2261
FT                   /number="4"
FT   exon            2262..2378
FT                   /number="5"
FT   intron          2379..2816
FT                   /number="5"
FT   exon            2817..2849
FT                   /number="6"
FT   intron          2850..2991
FT                   /number="6"
FT   exon            2992..3039
FT                   /number="7"
FT   intron          3040..3208
FT                   /number="7"
FT   exon            3209..3213
FT                   /number="8"
FT   UTR             3214..3513
SQ   Sequence 3513 BP; 672 A; 1016 C; 1067 G; 758 T; 0 other;
     agcagagggg tcagggcgaa gtcccagggc cccaggcgtg gctctcaggg tctcaggccc        60
     cgaaggcggt gtatggattg gggagtccca gccttgggga ttccccaact ccgcagtttc       120
     ttttctccct ctcccaacct atgtagggtc cttcttcctg gatactcacg acgcggaccc       180
     agttctcact cccattgggt gtcgggtttc cagagaagcc aatcagtgtc gtcgcggtcg       240
     cggttctaaa gtccgcacgc acccaccggg actcagattc tccccagacg ccgaggatgg       300
     ccgtcatggc gccccgaacc ctcgtcctgc tactctcggg ggccctggcc ctgacccaga       360
     cctgggcggg tgagtgcggg gtcgggaggg aaacggcctc tgtggggaga agcaaggggc       420
     ccgcccggcg ggggcgcagg acccgggaag ccgcgcctgg aggagggtcg ggcgggtctc       480
     agccactcct cgcccccagg ctcccactcc atgaggtatt tctacacttc cgtgtcccgg       540
     cccggccgcg gggagccccg cttcatcgcc gtgggctacg tggacgacac gcagttcgtg       600
     cggttcgaca gcgacgccgc gagccagagg atggagccgc gggcgccgtg gatagagcag       660
     gaggggccgg agtattggga ccggaacaca cggaatgtga aggcccagtc acagactgac       720
     cgagtggacc tggggaccct gcgcggctac tacaaccaga gcgaggccgg tgagtgaccc       780
     cggcccgggg cgcaggtcac gacccctcat cccccacgga cgggccaggt cgcccacagt       840
     ctccgggtcc gagatccgcc ccgaagccgc gggaccccga gacccttgcc ccgggagagg       900
     cccaggcgcc tttacccggt ttcattttca gtttaggcca aaaatccccc cgggttggtc       960
     ggggcggggc ggggctcggg ggaccgggct gacctcgggg tccgggccag gttctcacac      1020
     catccagatg atgtatggct gcgacgtggg gtcggacggg cgcttcctcc gcgggtaccg      1080
     gcaggacgcc tacgacggca aggattacat cgccctgaaa gaggacctgc gctcttggac      1140
     cgcggcggac atggcagctc agatcaccaa gcacaagtgg gaggcggccc atgtggcgga      1200
     gcagtggaga gcctacctgg agggcacgtg cgtggagtgg ctccgcagat acctggagaa      1260
     cgggaaggag acgctgcagc gcacgggtac caggggccac ggggcgcctc cctgatcgcc      1320
     tgtagatctc ccgggctggc ctcccacaag gaggggagac aattgggacc aacactagaa      1380
     tatcgccctc cctctggtcc tgagggagag gaatcctcct gggtttccag atcctgtacc      1440
     agagagtgac tctgaggttc cgccctgctc tctgacacaa ttaagggata aaatctctga      1500
     aggaatgacg ggaagacgat ccctcgaata ctgatgagtg gttccctttg acacacacag      1560
     gcagcagcct tgggcccgtg acttttcctc tcaggccttg ttctctgctt cacactcaat      1620
     gtgtgtgggg gtctgagtcc agcacttctg agtccctcag cctccactca ggtcaggacc      1680
     agaagtcgct gttccctctt cagggactag aattttccac ggaataggag attatcccag      1740
     gtgcctgtgt ccaggctggt gtctgggttc tgtgctccct tccccatccc aggtgtcctg      1800
     tccattctca agatagccac atgtgtgctg gaggagtgtc ccatgacaga tgcaaaatgc      1860
     ctgaatgatc tgactcttcc tgacagacgc ccccaaaacg catatgactc accacgctgt      1920
     ctctgaccat gaagccaccc tgaggtgctg ggccctgagc ttctaccctg cggagatcac      1980
     actgacctgg cagcgggatg gggaggacca gacccaggac acggagctcg tggagaccag      2040
     gcctgcaggg gatggaacct tccagaagtg ggtggctgtg gtggtgcctt ctggacagga      2100
     gcagagatac acctgccatg tgcagcatga gggtttgccc aagcccctca ccctgagatg      2160
     gggtaaggag ggagacgggg gtgtcatgtc ttttagggaa agcaggagcc tctctgacct      2220
     ttagcagggt cagggcccct caccttcccc tcttttccca gagccgtctt cccagcccac      2280
     catccccatc gtgggcatca ttgctggcct ggttctcttt ggagctgtga tcactggagc      2340
     tgtggtcgct gctgtgatgt ggaggaggaa gagctcaggt ggggaagggg tgaagggtgg      2400
     gtctgagatt tcttgtctca ctgagggttc caagacccag gtagaagtgt gccctgcctc      2460
     gttactggga agcaccaccc acaattatgg gcctacccag cctgggccct gtgtgccagc      2520
     acttactctt ttgtaaagca cctgttaaaa tgaaggacag atttatcacc ttgattacag      2580
     cggtgatggg acctgatccc agcagtcaca agtcacaggg gaaggtccct gaggaccttc      2640
     aggagggcgg ttggtccagg acccacacct gctttcttca tgtttcctga tcccgccctg      2700
     ggtctgcagt cacacatttc tggaaacttc tctgaggtcc aagacttgga ggttcctcta      2760
     ggaccttaag gccctgactc ctttctggta tctcacagga cattttcttc ccacagatag      2820
     aaaaggaggg agctactctc aggctgcaag taagtatgaa ggaggctgat gcctgaggtc      2880
     cttgggatat tgtgtttggg agcccatggg ggagctcacc caccccacaa ttcctcctct      2940
     agccacatct tctgtgggat ctgaccaggt tctgtttttg ttctacccca ggcagtgaca      3000
     gtgcccaggg ctctgatgtg tctctcacag cttgtaaagg tgagagcctg gagggcctga      3060
     tgtgtgttgg gtgttgggcg gaacagtgga cacagctgtg ctatggggtt tctttccatt      3120
     ggatgtattg agcatgcgat gggctgttta aagtgtgacc cctcactgtg acagatacga      3180
     atttgttcat gaatattttt ttctatagtg tgagacagct gccttgtgtg ggactgagag      3240
     gcaagagttg ttcctgccct tccctttgtg acttgaagaa ccctgacttt gtttctgcaa      3300
     aggcacctgc atgtgtctgt gttcgtgtag gcataatgtg aggaggtggg gagaccaccc      3360
     cacccccatg tccaccatga ccctcttccc acgctgacct gtgctccctc cccaatcatc      3420
     tttcctgttc cagagaggtg gggctgaggt gtctccatct ctgtctcaac ttcatggtgc      3480
     actgagctgt aacttcttcc ttccctatta aaa                                   3513
//