Dbfetch
ID HLA01046; SV 3; standard; DNA; HUM; 3513 BP.
XX
AC HLA01046;
XX
SV HLA01046.3
XX
DT 30-APR-1999 (Rel. 1.3.0, Created, Version 1)
DT 16-JAN-2024 (Rel. 3.55.0, Last Updated, Version 3)
XX
DE HLA-A*68:12:01, Human MHC Class I sequence
XX
KW Human MHC; HLA; Class I; HLA-A; Allele; HLA-A*68:12:01;
XX
OS Homo Sapiens (human)
OC Eukaryota; Metazoa; Chordata; Vertebrata; Mammalia; Eutheria; Primates;
OC Catarrhini; Hominidae; Homo.
XX
CC --------------------------------------------------------------------------
CC IPD-IMGT/HLA Release Version 3.55.0
CC --------------------------------------------------------------------------
CC Copyrighted by the IPD-IMGT/HLA Database, Distributed under the Creative
CC Commons Attribution-NoDerivs License, see;
CC http://www.ebi.ac.uk/ipd/imgt/hla/licence/ for further details.
CC --------------------------------------------------------------------------
XX
RN [1]
RP 1-3513
RX PUBMED; 11034565.
RA Fae I, Gleissner B, Kriks D, Leitner D, Fischer GF;
RT "Serological and nucleotide sequence analysis of HLA-A*6812.";
RL Tissue Antigens 56:276-278(2000).
XX
RN [2]
RP 1-3513
RX PUBMED; 30117314.
RA Lazaro A, Hou L, Tu B, Masaberg C, Enriquez E, Gerfen J, Kariyawasam K,
RA Persaud M, Qin X, Simbulan D, Xiao Y, Xun L, Yang R, Ng J, Hurley CK;
RT "Full gene HLA class I sequences of 79 novel and 519 mostly uncommon
RT alleles from a large United States registry population.";
RL HLA 92:304-309(2018).
XX
RN [3]
RP 1-3513
RX PUBMED; 30107213.
RA Voorter CEM, Matern B, Tran TH, Fink A, Vidan-Jeras B, Montanic S, Fischer
RA G, Fae I, de Santis D, Whidborne R, Andreani M, Testi M, Groeneweg M,
RA Tilanus MGJ;
RT "Full-length extension of HLA allele sequences by HLA allele-specific
RT hemizygous Sanger sequencing (SSBT).";
RL Human Immunology 79:763-772(2018).
XX
CC --------------------------------------------------------------------------
CC The sequence below is the official allele sequence as approved by the
CC WHO Nomenclature Committee for Factors of the HLA System.
CC Any cross references may differ from the sequence shown below.
CC --------------------------------------------------------------------------
XX
DR EMBL; AJ238362; AJ238362.1.
DR EMBL; AJ238363; AJ238363.1.
DR EMBL; AJ238364; AJ238364.1.
DR EMBL; EU924803; EU924803.1.
DR EMBL; LT962902; LT962902.1.
DR EMBL; MG189570; MG189570.1.
DR EMBL; MG372828; MG372828.1.
XX
FH Key Location/Qualifiers
FH
FT source 1..3513
FT /organism="Homo sapiens"
FT /mol_type="genomic DNA"
FT /db_xref="taxon:9606"
FT /ethnic="European, Undefined"
FT /cell_line="48212_2009-1796"
FT /cell_line="KE-GF"
FT /cell_line="NT01008"
FT /cell_line="NT01564"
FT /cell_line="NT01626"
FT CDS join(297..369,500..769,1011..1286,1887..2162,2262..2378,
FT 2817..2849,2992..3039,3209..3213)
FT /codon_start=1
FT /gene="HLA-A"
FT /allele="HLA-A*68:12:01"
FT /product="MHC Class I HLA-A*68:12:01 sequence"
FT /translation="MAVMAPRTLVLLLSGALALTQTWAGSHSMRYFYTSVSRPGRGEPR
FT FIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDRNTRNVKAQSQTDRVDLGT
FT LRGYYNQSEAGSHTIQMMYGCDVGSDGRFLRGYRQDAYDGKDYIALKEDLRSWTAADMA
FT AQITKHKWEAAHVAEQWRAYLEGTCVEWLRRYLENGKETLQRTDAPKTHMTHHAVSDHE
FT ATLRCWALSFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWVAVVVPSGQEQRY
FT TCHVQHEGLPKPLTLRWEPSSQPTIPIVGIIAGLVLFGAVITGAVVAAVMWRRKSSDRK
FT GGSYSQAASSDSAQGSDVSLTACKV"
FT UTR 1..296
FT exon 297..369
FT /number="1"
FT intron 370..499
FT /number="1"
FT exon 500..769
FT /number="2"
FT intron 770..1010
FT /number="2"
FT exon 1011..1286
FT /number="3"
FT intron 1287..1886
FT /number="3"
FT exon 1887..2162
FT /number="4"
FT intron 2163..2261
FT /number="4"
FT exon 2262..2378
FT /number="5"
FT intron 2379..2816
FT /number="5"
FT exon 2817..2849
FT /number="6"
FT intron 2850..2991
FT /number="6"
FT exon 2992..3039
FT /number="7"
FT intron 3040..3208
FT /number="7"
FT exon 3209..3213
FT /number="8"
FT UTR 3214..3513
SQ Sequence 3513 BP; 672 A; 1016 C; 1067 G; 758 T; 0 other;
agcagagggg tcagggcgaa gtcccagggc cccaggcgtg gctctcaggg tctcaggccc 60
cgaaggcggt gtatggattg gggagtccca gccttgggga ttccccaact ccgcagtttc 120
ttttctccct ctcccaacct atgtagggtc cttcttcctg gatactcacg acgcggaccc 180
agttctcact cccattgggt gtcgggtttc cagagaagcc aatcagtgtc gtcgcggtcg 240
cggttctaaa gtccgcacgc acccaccggg actcagattc tccccagacg ccgaggatgg 300
ccgtcatggc gccccgaacc ctcgtcctgc tactctcggg ggccctggcc ctgacccaga 360
cctgggcggg tgagtgcggg gtcgggaggg aaacggcctc tgtggggaga agcaaggggc 420
ccgcccggcg ggggcgcagg acccgggaag ccgcgcctgg aggagggtcg ggcgggtctc 480
agccactcct cgcccccagg ctcccactcc atgaggtatt tctacacttc cgtgtcccgg 540
cccggccgcg gggagccccg cttcatcgcc gtgggctacg tggacgacac gcagttcgtg 600
cggttcgaca gcgacgccgc gagccagagg atggagccgc gggcgccgtg gatagagcag 660
gaggggccgg agtattggga ccggaacaca cggaatgtga aggcccagtc acagactgac 720
cgagtggacc tggggaccct gcgcggctac tacaaccaga gcgaggccgg tgagtgaccc 780
cggcccgggg cgcaggtcac gacccctcat cccccacgga cgggccaggt cgcccacagt 840
ctccgggtcc gagatccgcc ccgaagccgc gggaccccga gacccttgcc ccgggagagg 900
cccaggcgcc tttacccggt ttcattttca gtttaggcca aaaatccccc cgggttggtc 960
ggggcggggc ggggctcggg ggaccgggct gacctcgggg tccgggccag gttctcacac 1020
catccagatg atgtatggct gcgacgtggg gtcggacggg cgcttcctcc gcgggtaccg 1080
gcaggacgcc tacgacggca aggattacat cgccctgaaa gaggacctgc gctcttggac 1140
cgcggcggac atggcagctc agatcaccaa gcacaagtgg gaggcggccc atgtggcgga 1200
gcagtggaga gcctacctgg agggcacgtg cgtggagtgg ctccgcagat acctggagaa 1260
cgggaaggag acgctgcagc gcacgggtac caggggccac ggggcgcctc cctgatcgcc 1320
tgtagatctc ccgggctggc ctcccacaag gaggggagac aattgggacc aacactagaa 1380
tatcgccctc cctctggtcc tgagggagag gaatcctcct gggtttccag atcctgtacc 1440
agagagtgac tctgaggttc cgccctgctc tctgacacaa ttaagggata aaatctctga 1500
aggaatgacg ggaagacgat ccctcgaata ctgatgagtg gttccctttg acacacacag 1560
gcagcagcct tgggcccgtg acttttcctc tcaggccttg ttctctgctt cacactcaat 1620
gtgtgtgggg gtctgagtcc agcacttctg agtccctcag cctccactca ggtcaggacc 1680
agaagtcgct gttccctctt cagggactag aattttccac ggaataggag attatcccag 1740
gtgcctgtgt ccaggctggt gtctgggttc tgtgctccct tccccatccc aggtgtcctg 1800
tccattctca agatagccac atgtgtgctg gaggagtgtc ccatgacaga tgcaaaatgc 1860
ctgaatgatc tgactcttcc tgacagacgc ccccaaaacg catatgactc accacgctgt 1920
ctctgaccat gaagccaccc tgaggtgctg ggccctgagc ttctaccctg cggagatcac 1980
actgacctgg cagcgggatg gggaggacca gacccaggac acggagctcg tggagaccag 2040
gcctgcaggg gatggaacct tccagaagtg ggtggctgtg gtggtgcctt ctggacagga 2100
gcagagatac acctgccatg tgcagcatga gggtttgccc aagcccctca ccctgagatg 2160
gggtaaggag ggagacgggg gtgtcatgtc ttttagggaa agcaggagcc tctctgacct 2220
ttagcagggt cagggcccct caccttcccc tcttttccca gagccgtctt cccagcccac 2280
catccccatc gtgggcatca ttgctggcct ggttctcttt ggagctgtga tcactggagc 2340
tgtggtcgct gctgtgatgt ggaggaggaa gagctcaggt ggggaagggg tgaagggtgg 2400
gtctgagatt tcttgtctca ctgagggttc caagacccag gtagaagtgt gccctgcctc 2460
gttactggga agcaccaccc acaattatgg gcctacccag cctgggccct gtgtgccagc 2520
acttactctt ttgtaaagca cctgttaaaa tgaaggacag atttatcacc ttgattacag 2580
cggtgatggg acctgatccc agcagtcaca agtcacaggg gaaggtccct gaggaccttc 2640
aggagggcgg ttggtccagg acccacacct gctttcttca tgtttcctga tcccgccctg 2700
ggtctgcagt cacacatttc tggaaacttc tctgaggtcc aagacttgga ggttcctcta 2760
ggaccttaag gccctgactc ctttctggta tctcacagga cattttcttc ccacagatag 2820
aaaaggaggg agctactctc aggctgcaag taagtatgaa ggaggctgat gcctgaggtc 2880
cttgggatat tgtgtttggg agcccatggg ggagctcacc caccccacaa ttcctcctct 2940
agccacatct tctgtgggat ctgaccaggt tctgtttttg ttctacccca ggcagtgaca 3000
gtgcccaggg ctctgatgtg tctctcacag cttgtaaagg tgagagcctg gagggcctga 3060
tgtgtgttgg gtgttgggcg gaacagtgga cacagctgtg ctatggggtt tctttccatt 3120
ggatgtattg agcatgcgat gggctgttta aagtgtgacc cctcactgtg acagatacga 3180
atttgttcat gaatattttt ttctatagtg tgagacagct gccttgtgtg ggactgagag 3240
gcaagagttg ttcctgccct tccctttgtg acttgaagaa ccctgacttt gtttctgcaa 3300
aggcacctgc atgtgtctgt gttcgtgtag gcataatgtg aggaggtggg gagaccaccc 3360
cacccccatg tccaccatga ccctcttccc acgctgacct gtgctccctc cccaatcatc 3420
tttcctgttc cagagaggtg gggctgaggt gtctccatct ctgtctcaac ttcatggtgc 3480
actgagctgt aacttcttcc ttccctatta aaa 3513
//