Dbfetch
ID HLA00168; SV 3; standard; DNA; HUM; 3799 BP. XX AC HLA00168; XX SV HLA00168.3 XX DT 30-APR-1992 (Rel. 1.0.0, Created, Version 1) DT 16-JAN-2024 (Rel. 3.55.0, Last Updated, Version 3) XX DE HLA-B*15:05:01:01, Human MHC Class I sequence XX KW Human MHC; HLA; Class I; HLA-B; Allele; HLA-B*15:05:01:01; XX OS Homo Sapiens (human) OC Eukaryota; Metazoa; Chordata; Vertebrata; Mammalia; Eutheria; Primates; OC Catarrhini; Hominidae; Homo. XX CC -------------------------------------------------------------------------- CC IPD-IMGT/HLA Release Version 3.55.0 CC -------------------------------------------------------------------------- CC Copyrighted by the IPD-IMGT/HLA Database, Distributed under the Creative CC Commons Attribution-NoDerivs License, see; CC http://www.ebi.ac.uk/ipd/imgt/hla/licence/ for further details. CC -------------------------------------------------------------------------- XX RN [1] RP 1-3799 RX PUBMED; 8423049. RA Choo SY, Fan LA, Hansen JA; RT "Allelic variations clustered in the antigen binding sites of HLA-Bw62 RT molecules."; RL Immunogenetics 37:108-113(1993). XX CC -------------------------------------------------------------------------- CC The sequence below is the official allele sequence as approved by the CC WHO Nomenclature Committee for Factors of the HLA System. CC Any cross references may differ from the sequence shown below. CC -------------------------------------------------------------------------- XX DR EMBL; AJ620474; AJ620474.1. DR EMBL; AJ620475; AJ620475.1. DR EMBL; FR872708; FR872708.1. DR EMBL; JN202318; JN202318.1. DR EMBL; KC677668; KC677668.1. DR EMBL; M83191; M83191.1. DR EMBL; MN449983; MN449983.1. DR EMBL; MN461528; MN461528.1. XX FH Key Location/Qualifiers FH FT source 1..3799 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /db_xref="taxon:9606" FT /ethnic="Asian, Native American, Undefined" FT /cell_line="38241" FT /cell_line="60675719" FT /cell_line="BY01892" FT /cell_line="BY01893" FT /cell_line="MDA0000074" FT /cell_line="NT02327" FT /cell_line="T01-1808" FT /cell_line="VB" FT CDS join(285..357,487..756,1002..1277,1853..2128,2233..2349, FT 2791..2823,2930..2973) FT /codon_start=1 FT /gene="HLA-B" FT /allele="HLA-B*15:05:01:01" FT /product="MHC Class I HLA-B*15:05:01:01 sequence" FT /translation="MRVTAPRTVLLLLSGALALTETWAGSHSMRYFYTAMSRPGRGEPR FT FIAVGYVDDTQFVRFDSDAASPRMAPRAPWIEQEGPEYWDRETQISKTNTQTYRESLRN FT LRGYYNQSEAGSHTLQRMYGCDVGPDGRLLRGHDQSAYDGKDYIALNEDLSSWTAADTA FT AQITQRKWEAARVAEQLRAYLEGLCVEWLRRYLENGKETLQRADPPKTHVTHHPISDHE FT ATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRY FT TCHVQHEGLPKPLTLRWEPSSQSTIPIVGIVAGLAVLAVVVIGAVVATVMCRRKSSGGK FT GGSYSQAASSDSAQGSDVSLTA" FT UTR 1..284 FT exon 285..357 FT /number="1" FT intron 358..486 FT /number="1" FT exon 487..756 FT /number="2" FT intron 757..1001 FT /number="2" FT exon 1002..1277 FT /number="3" FT intron 1278..1852 FT /number="3" FT exon 1853..2128 FT /number="4" FT intron 2129..2232 FT /number="4" FT exon 2233..2349 FT /number="5" FT intron 2350..2790 FT /number="5" FT exon 2791..2823 FT /number="6" FT intron 2824..2929 FT /number="6" FT exon 2930..2973 FT /number="7" FT UTR 2974..3799 SQ Sequence 3799 BP; 714 A; 1072 C; 1167 G; 846 T; 0 other; gatcaggacg aagtcccagg tcccggacgg ggctctcagg gtctcaggct ccgagagcct 60 tgtctgcatt ggggaggcgc agcgttgggg attccccact cccacgagtt tcacttcttc 120 tcccaaccta tgtcgggtcc ttcttccagg atactcgtga cgcgtcccca tttcccactc 180 ccattgggtg tcgggtgtct agagaagcca atcagtgtcg ccggggtccc agttctaaag 240 tccccacgca cccacccgga ctcaaaatct cctcagacgc cgagatgcgg gtcacggcgc 300 cccgaaccgt cctcctgctg ctctcgggag ccctggccct gaccgagacc tgggccggtg 360 agtgcggggt cggcagggaa atggcctctg tggggaggag cgaggggacc gcaggcgggg 420 gcgcaggacc cggggagccg cgccgggagg agggtcgggc gggtctcagc ccctcctcgc 480 ccccaggctc ccactccatg aggtatttct acaccgccat gtcccggccc ggccgcgggg 540 agccccgctt catcgcagtg ggctacgtgg acgacaccca gttcgtgagg ttcgacagcg 600 acgccgcgag tccgaggatg gcgccccggg cgccatggat agagcaggag gggccggagt 660 attgggaccg ggagacacag atctccaaga ccaacacaca gacttaccga gagagcctgc 720 ggaacctgcg cggctactac aaccagagcg aggccggtga gtgaccccgg cctggggcgc 780 aggtcacgac tccccatccc ccacgtacgg cccgggtcgc cccgagtctc cgggtccgag 840 atccgccccc ctgaggccgc gggacccgcc caaaccctcg accggcgaga gccccaggcg 900 cgtttacccg gtttcatttt cagttgaggc caaaatcccc gcgggttggt cggggcgggg 960 cggggctcgg gggacggggc tgaccgcggg gcctgggcca gggtctcaca ccctccagag 1020 gatgtacggc tgcgacgtgg ggccggacgg gcgcctcctc cgcgggcatg accagtccgc 1080 ctacgacggc aaggattaca tcgccctgaa cgaggacctg agctcctgga ccgcggcgga 1140 cacggcggct cagatcaccc agcgcaagtg ggaggcggcc cgtgtggcgg agcagctgag 1200 agcctacctg gagggcctgt gcgtggagtg gctccgcaga tacctggaga acgggaagga 1260 gacgctgcag cgcgcgggta ccaggggcag tggggagcct tccccatctc ctataggtcg 1320 ccggggatgg cctcccacga gaagaggagg aaaatgggat cagcgctaga atgtcgccct 1380 cccttgaatg gagaatggca tgagttttcc tgagtttcct ctgagggccc cctcttctct 1440 ctaggacaat taagggatga cgtctctgag gaaatggagg ggaagacagt ccctaggata 1500 gtgatcaggg gtcccctttg acccctgcag cagccttggg aaccgtgact tttcctctca 1560 ggccttgttc tctgcctcac actcagtgtg tttggggctc tgattccagc acttctgagt 1620 cactttacct ccactcagat caggagcaga agtccctgtt ccccgctcag agactcgaac 1680 tttccaatga ataggagatt atcccaggtg cctgcgtcca ggctggtgtc tgggttctgt 1740 gccccttccc caccccaggt gtcctgtcca ttctcaggct ggtcacatgg gtggtcctag 1800 ggtgtcccat gagagatgca aagcgcctga attttctgac tcttcccatc agacccccca 1860 aagacacatg tgacccacca ccccatctct gaccatgagg ccaccctgag gtgctgggcc 1920 ctgggcttct accctgcgga gatcacactg acctggcagc gggatggcga ggaccaaact 1980 caggacaccg agcttgtgga gaccagacca gcaggagata gaaccttcca gaagtgggca 2040 gctgtggtgg tgccttctgg agaagagcag agatacacat gccatgtaca gcatgagggg 2100 ctgccgaagc ccctcaccct gagatggggt aaggaggggg atgaggggtc atatctgttc 2160 tcagggaaag caggagccct tctggagccc ttcagcaggg tcagggcccc tcatcttccc 2220 ctcctttccc agagccatct tcccagtcca ccatccccat cgtgggcatt gttgctggcc 2280 tggctgtcct agcagttgtg gtcatcggag ctgtggtcgc tactgtgatg tgtaggagga 2340 agagctcagg tagggaaggg gtgaggggtg gggtctgggt tttcttgtcc cactgggggt 2400 ttcaagcccc aggtagaagt gttccctgcc tcattactgg gaagcagcat ccacacaggg 2460 gctaacgcag cctgggaccc tgtgtgccag cacttactct tttgtgcagc acatgtgaca 2520 atgaaggaca gatgtatcgc cttgatggtt gtggtgttgg ggtcctgatt ccagcattca 2580 tgagtcaggg gaaggtccct gctaaggaca gaccttagga gggcagttgg tccaggaccc 2640 acacttgctt tcctcgtgtt tcctgatcct gccctgggtc tgtagtcata cttctggaaa 2700 ttccttttgg ttccaagacg aggaggttcc tctaagatct catggtcctg cttcctccca 2760 gtcccctcac aggacatttt cttcccacag gtggaaaagg agggagctac tctcaggctg 2820 cgtgtaagtg gtgggggtgg gagtgtggag gagctcaccc accccataat tcctcctgtc 2880 ccacgtctcc tgcgggctct gaccaggtcc tgtttttgtt ctactccagc cagcgacagt 2940 gcccagggct ctgatgtgtc tctcacagct tgaaaaggtg agattcttgg ggtctagagt 3000 gggtggggtg gcgggtctgg gggtgggtgg ggcagtgggg aaaggcctgg gtaatggaga 3060 ttctttgatt gggatgtttc gcgtgtgtcg tgggctgttc agagtgtcat cacttaccat 3120 gactaaccag aatttgttca tgactgttgt tttctgtagc ctgagacagc tgtcttgtga 3180 gggaccgaga tgcaggattt cttcacgcct cccctttgtg acttcaagag cctctggcat 3240 ctctttctgc aaaggcacct gaatgtgtct gcgtccctgt tagcataatg tgaggaggtg 3300 gagagacagc ccacccttgt gtccactgtg acccctgttc ccatgctgat ctgtgtttcc 3360 tccccagtca tctttcttgt tccagagagg tggggctgga tgtctccatc tctgtctcaa 3420 ctttatgtgc actgagctgc aacttcttac ttccctactg aaaataagaa tctgaatata 3480 aatttgtttt ctcaaatatt tgctatgaga ggttgatgga ttaattaaat aagtcaattc 3540 ctggaatttg aaagagcaaa taaagacctg agaaccttcc agaatctgca tgttcgctgt 3600 gctgagtctg ttgcaggtgg ggtgtggaga aggctgtggg gggccgagtg tggatggggc 3660 ctgtgcccat ttggtgttga gtccatcatg ggctttatgt ggttagtcgt cagctgggtc 3720 accttcactg ctccattgtc cttgtccctt cagtggaaac ttgtccagtg ggagctgtga 3780 ccacagaggc tcacacatc 3799 //