edam_ontology EDAM_data EDAM_format EDAM_identifier EDAM_operation EDAM_topic MIR:00000189 EDAM_topic:0770 MIR:00000189 http://emboss.sourceforge.net/apps/cvs/emboss/apps/ontoget.html EMBOSS ontoget http://emboss.sourceforge.net/apps/cvs/emboss/apps/ontotext.html EMBOSS ontotext obo EMBRACE Data and Methods (EDAM) Ontology. EDAM 0338 1929 EDAM_operation:0338 EDAM_format:1929 0000338 0001929 EDAM_format:2549 text EDAM_data:2858 default text/html default text/html html text/plain raw EDAM_format:2549 EDAM_format:2549 text EDAM_data:2858 obo text/html default text/html html text/plain raw EDAM_format:2549 http://edamontology.sourceforge.net/ edam emnew emall em_new em_all emenv emest emfun emgss emhtc emhtg emhum eminv emmam emmus emom emov emorg empat emphg empln empro emrod emstd emsts emsyn emtgn emtpa emtsa emunc emvrl emvrt emwgs em_om em_ov em_ph em_pl em_ro em_sy em_un em_vi em_env em_fun em_hum em_inv em_mam em_mus em_org em_phg em_pln em_pro em_rod em_syn em_tgn em_unc em_vrl em_vrt em_est em_gss em_htc em_htg em_pat em_std em_sts em_tpa em_tsa em_wgs ddbj genbank emb dbj gb evec emvec em_vec emblrelease emblrelease_standard emblrelease_tsa emblrelease_wgs emblnew emblnew_standard emblnew_tsa emblnew_wgs embldeleted emblestrelease embldeletedrelease embltsa embltsanew embltsarelease emblwgs emblwgsnew emblwgsrelease emblwgsrelease_aa emblwgsrelease_ab emblwgsrelease_ac emblwgsrelease_ad emblwgsrelease_ae emblwgsrelease_af emblwgsrelease_ag emblwgsrelease_ah emblwgsrelease_ai emblwgsrelease_aj emblwgsrelease_ak emblwgsrelease_al emblwgsrelease_am emblwgsrelease_etc patent_dna embl-bank embl_bank xembl MIR:00000029 insd insdc DRCAT:EMBL EDAM_topic:3042 MIR:00000029 DRCAT:EMBL http://www.ebi.ac.uk/ena/ ENA Browser http://www.ebi.ac.uk/cgi-bin/sva/sva.pl EMBL-SVA http://www.ncbi.nlm.nih.gov/books/NBK1763/ NCBI BLAST blastdbcmd http://www.dkfz.de/srs/ SRS@DKFZ embl EMBL Nucleotide Sequence Database, Europe's primary nucleotide sequence resource. The main sources of the DNA and RNA sequences in the database are submissions from individual researchers, genome sequencing projects and patent applications. EMBL-Bank M10051 K00650 D87894 AJ242600 J00231.1 K00650.1 D87894.1 AJ242600.1 EDAM_format:1927 em EDAM_data:2889 default text/html default text/html html text/plain raw EDAM_format:1927 EDAM_format:1927 EDAM_data:0855 annot text/html default text/html html text/plain raw EDAM_format:1927 EDAM_format:1927 em EDAM_data:2889 embl text/html default text/html html text/plain raw EDAM_format:1927 EDAM_format:2183 EDAM_data:2889 emblxml-1.0 text/xml default text/xml raw EDAM_format:2183 EDAM_format:2183 emblxml EDAM_data:2889 emblxml-1.1 text/xml default text/xml raw EDAM_format:2183 EDAM_format:2183 EDAM_data:2889 emblxml-1.2 text/xml default text/xml raw EDAM_format:2183 EDAM_format:2330 EDAM_data:2018 entrysize text/html default text/html html text/plain raw EDAM_format:2330 EDAM_format:1954 pearson fa EDAM_format:1929 EDAM_data:2046 fasta text/html default text/html html text/plain raw EDAM_format:1954 EDAM_format:1929 EDAM_format:2185 insdxml-1.4 EDAM_data:2889 insdxml text/xml default text/xml raw EDAM_format:2185 EDAM_format:2332 seqxml-0.4 EDAM_data:2046 seqxml text/xml default text/xml raw EDAM_format:2332 http://www.ebi.ac.uk/embl/ embl emcds em_cds embl-cds embl_cds EDAM_topic:3042 http://www.ebi.ac.uk/ena/ ENA Browser http://www.ncbi.nlm.nih.gov/books/NBK1763/ NCBI BLAST blastdbcmd embl EMBLCDS is a database of nucleotide sequences of the CDS (coding sequence) features, as annotated in EMBL database. EMBLCDS record contains the nucleotide sequence of the CDS region, accompanying annotation from the parent nucleotide entry and the additional automatically generated annotation. EMBLCDS AAA59452 AAA59452.1 EDAM_format:1927 em emblcds EDAM_data:2889 default text/html default text/html html text/plain raw EDAM_format:1927 EDAM_format:1927 EDAM_data:0855 annot text/html default text/html html text/plain raw EDAM_format:1927 EDAM_format:1927 em emblcds EDAM_data:2889 embl text/html default text/html html text/plain raw EDAM_format:1927 EDAM_format:2183 emblxml emblcdsxml-1.1 EDAM_data:2889 emblxml-1.1 text/xml default text/xml raw EDAM_format:2183 EDAM_format:2184 emblcdsxml-1.2 EDAM_data:2889 emblxml-1.2 text/xml default text/xml raw EDAM_format:2184 EDAM_format:2330 EDAM_data:2018 entrysize text/html default text/html html text/plain raw EDAM_format:2330 EDAM_format:1954 pearson fa EDAM_data:2046 EDAM_data:1929 fasta text/html default text/html html text/plain raw EDAM_format:1954 EDAM_format:2332 seqxml-0.4 EDAM_data:2046 seqxml text/xml default text/xml raw EDAM_format:2332 http://www.ebi.ac.uk/embl/ emblcds emcon em_con emann em_ann emblnew_con emblrelease_con emblann emblannnew emblannrelease emblconnew emblconrelease emblanncon EDAM_topic:3042 MIR:00000029 DRCAT:EMBL http://www.ebi.ac.uk/ena/ ENA Browser http://www.ebi.ac.uk/cgi-bin/sva/sva.pl EMBL-SVA embl The EMBLCON database division represents complete genomes and other long sequences constructed from segment entries. EMBLCON CH003588 CH003588.1 EDAM_format:1927 em EDAM_data:2889 default text/html default text/html html text/plain raw EDAM_format:1927 EDAM_format:1927 EDAM_data:0855 annot text/html default text/html html text/plain raw EDAM_format:1927 EDAM_format:1927 em EDAM_data:2889 embl text/html default text/html html text/plain raw EDAM_format:1927 EDAM_format:2183 EDAM_data:2889 emblxml-1.0 text/xml default text/xml raw EDAM_format:2183 EDAM_format:2183 emblxml EDAM_data:2889 emblxml-1.1 text/xml default text/xml raw EDAM_format:2183 EDAM_format:2183 EDAM_data:2889 emblxml-1.2 text/xml default text/xml raw EDAM_format:2183 EDAM_format:2330 EDAM_data:2018 entrysize text/html default text/html html text/plain raw EDAM_format:2330 EDAM_format:1954 pearson fa EDAM_data:2046 fasta text/html default text/html html text/plain raw EDAM_format:1954 EDAM_format:2185 insdxml-1.4 EDAM_data:2889 insdxml text/xml default text/xml raw EDAM_format:2185 EDAM_format:2332 seqxml-0.4 EDAM_data:2046 seqxml text/xml default text/xml raw EDAM_format:2332 http://www.ebi.ac.uk/embl/ emblcon emconexp em_conexp emblconexpnew emblconexprelease EDAM_topic:3042 MIR:00000029 DRCAT:EMBL http://www.ebi.ac.uk/ena/ ENA Browser embl The EMBLCON database division represents complete genomes and other long sequences constructed from segment entries. Expanded entries including the complete sequence. EMBLCONEXP AL672111 AL672111.1 EDAM_format:1927 em EDAM_data:2889 default text/html default text/html html text/plain raw EDAM_format:1927 EDAM_format:1927 EDAM_data:0855 annot text/html default text/html html text/plain raw EDAM_format:1927 EDAM_format:1927 em EDAM_data:2889 embl text/html default text/html html text/plain raw EDAM_format:1927 EDAM_format:2183 EDAM_data:2889 emblxml-1.0 text/xml default text/xml raw EDAM_format:2183 EDAM_format:2183 emblxml EDAM_data:2889 emblxml-1.1 text/xml default text/xml raw EDAM_format:2183 EDAM_format:2183 EDAM_data:2889 emblxml-1.2 text/xml default text/xml raw EDAM_format:2183 EDAM_format:2330 EDAM_data:2018 entrysize text/html default text/html html text/plain raw EDAM_format:2330 EDAM_format:1954 pearson fa EDAM_data:2046 fasta text/html default text/html html text/plain raw EDAM_format:1954 EDAM_format:2185 insdxml-1.4 EDAM_data:2889 insdxml text/xml default text/xml raw EDAM_format:2185 EDAM_format:2332 seqxml-0.4 EDAM_data:2046 seqxml text/xml default text/xml raw EDAM_format:2332 http://www.ebi.ac.uk/embl/ emblconexp embl-sva sva EDAM_topic:3042 MIR:00000029 http://www.ebi.ac.uk/cgi-bin/sva/sva.pl EMBL-SVA embl The EMBL Sequence Version Archive is a repository of all entries which have ever appeared in the EMBL Nucleotide Sequence Database. EMBL-SVA Y09633 Y09633.1 Y09633.4 EDAM_format:1927 em EDAM_data:2889 default text/html default text/html html text/plain raw EDAM_format:1927 EDAM_format:1927 EDAM_data:0855 annot text/html default text/html html text/plain raw EDAM_format:1927 EDAM_format:1927 em EDAM_data:2889 embl text/html default text/html html text/plain raw EDAM_format:1927 EDAM_format:2330 EDAM_data:2018 entrysize text/html default text/html html text/plain raw EDAM_format:2330 EDAM_format:1954 pearson fa EDAM_data:2046 fasta text/html default text/plain raw EDAM_format:1954 http://www.ebi.ac.uk/cgi-bin/sva/sva.pl emblsva ensembl ensembl_gene MIR:00000003 EDAM_topic:3042 MIR:00000003 DRCAT:Ensembl http://www.ensembl.org/ Ensembl UK http://useast.ensembl.org/ Ensembl USA East http://uswest.ensembl.org/ Ensembl USA West http://asia.ensembl.org/ Ensembl Asia fasta Ensembl genome databases for vertebrate species and model organisms, for other species see Ensembl Genomes instead of Ensembl. Gene sequences and annotations. Ensembl Gene ENSAMEG00000011969 ENSBTAG00000000988 ENSG00000139618 ENSMUSG00000041147 EDAM_format:1954 pearson fa EDAM_data:2046 default text/html default text/plain raw EDAM_format:1954 EDAM_format:2330 csv text/html default text/plain raw EDAM_format:2330 EDAM_format:1927 em EDAM_data:2889 embl text/html default text/plain raw EDAM_format:1927 EDAM_format:1954 pearson fa EDAM_data:2046 fasta text/html default text/plain raw EDAM_format:1954 EDAM_format:1936 gb EDAM_data:2889 genbank text/html default text/plain raw EDAM_format:1936 EDAM_format:1974 gff2 gff text/html default text/plain raw EDAM_format:1974 EDAM_format:1975 gff3 text/html default text/plain raw EDAM_format:1975 EDAM_format:2330 tab text/html default text/plain raw EDAM_format:2330 http://www.ensembl.org/ ensemblgene eggene ensemblgenomes ensemblgenomes_gene ensembl_genomes_gene ensembl_genomes_metazoa ensembl_genomes_plants ensembl_genomes_fungi ensembl_genomes_protists ensembl_genomes_bacteria ensemblgenomes_metazoa ensemblgenomes_plants ensemblgenomes_fungi ensemblgenomes_protists ensemblgenomes_bacteria ensemblgenomesmetazoa ensemblgenomesplants ensemblgenomesfungi ensemblgenomesprotists ensemblgenomesbacteria ensembl_metazoa ensembl_plants ensembl_fungi ensembl_protists ensembl_bacteria ensemblmetazoa ensemblplants ensemblfungi ensemblprotists ensemblbacteria EDAM_topic:3042 DRCAT:Ensembl-Genome DRCAT:EnsemblBacteria DRCAT:EnsemblFungi DRCAT:EnsemblMetazoa DRCAT:EnsemblPlants DRCAT:EnsemblProtists http://www.ensemblgenomes.org/ EnsemblGenomes UK fasta Ensembl Genomes genome databases for metazoa, plants, fungi, protists and bacteria, for vertebrate species and model organisms see Ensembl instead of Ensembl Genomes. Gene sequences and annotations. Ensembl Genomes Gene AAEL000001 AGAP006864 GB19834 EBESCG00000000947 EDAM_format:1954 pearson fa EDAM_data:2046 default text/html default text/plain raw EDAM_format:1954 EDAM_format:2330 csv text/html default text/plain raw EDAM_format:2330 EDAM_format:1927 em EDAM_data:2889 embl text/html default text/plain raw EDAM_format:1927 EDAM_format:1954 pearson fa EDAM_data:2046 fasta text/html default text/plain raw EDAM_format:1954 EDAM_format:1936 gb EDAM_data:2889 genbank text/html default text/plain raw EDAM_format:1936 EDAM_format:1974 gff2 gff text/html default text/plain raw EDAM_format:1974 EDAM_format:1975 gff3 text/html default text/plain raw EDAM_format:1975 EDAM_format:2330 tab text/html default text/plain raw EDAM_format:2330 http://www.ensemblgenomes.org/ ensemblgenomesgene egtranscript ensemblGenomes_transcript ensembl_genomes_transcript EDAM_topic:3042 DRCAT:Ensembl-Genome DRCAT:EnsemblBacteria DRCAT:EnsemblFungi DRCAT:EnsemblMetazoa DRCAT:EnsemblPlants DRCAT:EnsemblProtists http://www.ensemblgenomes.org/ EnsemblGenomes UK fasta Ensembl Genomes genome databases for metazoa, plants, fungi, protists and bacteria, for vertebrate species and model organisms see Ensembl instead of Ensembl Genomes. Transcript sequences. Ensembl Genomes Transcript AAEL000001-RA AGAP006864-RA GB19834-RA EBESCT00000002837 EDAM_format:1954 pearson fa EDAM_data:2046 default text/html default text/plain raw EDAM_format:1954 EDAM_format:1954 pearson fa EDAM_data:2046 fasta text/html default text/plain raw EDAM_format:1954 http://www.ensemblgenomes.org/ ensemblgenomestranscript ensembl_transcript EDAM_topic:3042 MIR:00000003 DRCAT:Ensembl http://www.ensembl.org/ Ensembl UK http://useast.ensembl.org/ Ensembl USA East http://uswest.ensembl.org/ Ensembl USA West http://asia.ensembl.org/ Ensembl Asia fasta Ensembl genome databases for vertebrate species and model organisms, for other species see Ensembl Genomes instead of Ensembl. Transcript sequences. Ensembl Transcript ENSAMET00000013126 ENSBTAT00000001311 ENST00000380152 ENSMUST00000044620 EDAM_format:1954 pearson fa EDAM_data:2046 default text/html default text/plain raw EDAM_format:1954 EDAM_format:1954 pearson fa EDAM_data:2046 fasta text/html default text/plain raw EDAM_format:1954 http://www.ensembl.org/ ensembltranscript epo_patent_proteins epo_proteins epoprt epop epo EDAM_topic:3043 http://www.ebi.ac.uk/ebisearch/ EB-eye http://emboss.sourceforge.net/apps/cvs/emboss/apps/entret.html EMBOSS entret http://www.ncbi.nlm.nih.gov/books/NBK1763/ NCBI BLAST blastdbcmd http://emboss.sourceforge.net/apps/cvs/emboss/apps/seqret.html EMBOSS seqret embl Protein sequences appearing in patents from the European Patent Office (EPO). EPO Proteins A00022 A00022.1 EDAM_format:1927 swissprot swiss em EDAM_data:2888 default text/html default text/html html text/plain raw EDAM_format:1927 EDAM_format:1927 EDAM_data:0855 annot text/html default text/html html text/plain raw EDAM_format:1927 EDAM_format:1927 swissprot swiss em EDAM_data:2888 embl text/html default text/html html text/plain raw EDAM_format:1927 EDAM_format:2330 EDAM_data:2018 entrysize text/html default text/html html text/plain raw EDAM_format:2330 EDAM_format:1954 pearson fa EDAM_data:2047 fasta text/html default text/html html text/plain raw EDAM_format:1954 EDAM_format:2332 seqxml-0.4 EDAM_data:2047 seqxml text/xml default text/xml raw EDAM_format:2332 http://www.ebi.ac.uk/patentdata/proteins/ epo_prt go MIR:00000022 obo.go DRCAT:GO EDAM_topic:0089 MIR:00000022 DRCAT:GO http://www.ebi.ac.uk/QuickGO/ QuickGO http://srs.ebi.ac.uk/ SRS@EMBL-EBI http://emboss.sourceforge.net/apps/cvs/emboss/apps/ontoget.html EMBOSS ontoget http://emboss.sourceforge.net/apps/cvs/emboss/apps/ontotext.html EMBOSS ontotext gordfxml The Gene Ontology project provides an ontology of defined terms representing gene product properties. The ontology covers three domains: cellular component, the parts of a cell or its extracellular environment; molecular function, the elemental activities of a gene product at the molecular level, such as binding or catalysis; and biological process, operations or sets of molecular events with a defined beginning and end, pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. Gene Ontology GO:0000187 0000187 EDAM_format:2332 EDAM_format:2376 rdfxml rdf EDAM_data:2858 default text/html default text/plain raw EDAM_format:2332 EDAM_format:2376 EDAM_format:2549 text EDAM_data:2858 obo text/html default text/html html text/plain raw EDAM_format:2549 EDAM_format:2550 xml EDAM_data:2858 oboxml text/xml default text/xml raw EDAM_format:2550 EDAM_format:2332 EDAM_format:2376 rdfxml rdf EDAM_data:2858 gordfxml text/xml default text/xml raw EDAM_format:2332 EDAM_format:2376 http://www.geneontology.org/ geneontology hugo MIR:00000080 DRCAT:HGNC EDAM_topic:2811 MIR:00000080 DRCAT:HGNC http://www.genenames.org/ GeneNames.org tab HUGO Gene Nomenclature Committee (HGNC) approved gene name and symbol (short-form abbreviation) for each human gene. HGNC 1101 3566 BRCA2 FACD EDAM_format:2330 EDAM_data:0832 default text/html default text/html html text/plain raw EDAM_format:2330 EDAM_format:2330 EDAM_data:0832 tab text/html default text/html html text/plain raw EDAM_format:2330 http://genenames.org/ hgnc hla DRCAT:IMGT_HLA EDAM_topic:3042 DRCAT:IMGT_HLA http://emboss.sourceforge.net/apps/cvs/emboss/apps/entret.html EMBOSS entret http://emboss.sourceforge.net/apps/cvs/emboss/apps/entret.html EMBOSS seqret http://www.ncbi.nlm.nih.gov/books/NBK1763/ NCBI BLAST blastdbcmd embl Sequences of the human major histocompatibility complex (HLA) including the official sequences for the WHO Nomenclature Committee For Factors of the HLA System. IMGT/HLA HLA00001 A*01:02 EDAM_format:1927 em EDAM_data:2889 default text/html default text/html html text/plain raw EDAM_format:1927 EDAM_format:1927 EDAM_data:0855 annot text/html default text/html html text/plain raw EDAM_format:1927 EDAM_format:1927 em EDAM_data:2889 embl text/html default text/html html text/plain raw EDAM_format:1927 EDAM_format:2330 EDAM_data:2018 entrysize text/html default text/html html text/plain raw EDAM_format:2330 EDAM_format:2332 seqxml-0.4 EDAM_data:2046 seqxml text/xml default text/xml raw EDAM_format:2332 EDAM_format:1954 pearson fa EDAM_data:2046 fasta text/html default text/html html text/plain raw EDAM_format:1954 http://www.ebi.ac.uk/imgt/hla/ imgthla EDAM_topic:3043 DRCAT:IMGT_HLA http://www.ncbi.nlm.nih.gov/books/NBK1763/ NCBI BLAST blastdbcmd http://emboss.sourceforge.net/apps/cvs/emboss/apps/seqret.html EMBOSS seqret fasta Sequences of the human major histocompatibility complex (HLA) including the official sequences for the WHO Nomenclature Committee For Factors of the HLA System. IMGT/HLA (Protein) HLA00001 EDAM_format:1954 pearson fa EDAM_data:2047 default text/html default text/html html text/plain raw EDAM_format:1954 EDAM_format:1954 pearson fa EDAM_data:2047 fasta text/html default text/html html text/plain raw EDAM_format:1954 http://www.ebi.ac.uk/imgt/hla/ imgthlap DRCAT:IMGT_LIGM EDAM_topic:3042 DRCAT:IMGT_LIGM http://emboss.sourceforge.net/apps/cvs/emboss/apps/entret.html EMBOSS entret http://emboss.sourceforge.net/apps/cvs/emboss/apps/entret.html EMBOSS seqret http://www.ncbi.nlm.nih.gov/books/NBK1763/ NCBI BLAST blastdbcmd embl A comprehensive database of Immunoglobulins and T cell Receptors from human and other vertebrates. IMGT/LIGM-DB A00673 AF003293 EDAM_format:1927 em EDAM_data:2889 default text/html default text/html html text/plain raw EDAM_format:1927 EDAM_format:1927 EDAM_data:0855 annot text/html default text/html html text/plain raw EDAM_format:1927 EDAM_format:1927 em EDAM_data:2889 embl text/html default text/html html text/plain raw EDAM_format:1927 EDAM_format:2330 EDAM_data:2018 entrysize text/html default text/html html text/plain raw EDAM_format:2330 EDAM_format:2332 seqxml-0.4 EDAM_data:2046 seqxml text/xml default text/xml raw EDAM_format:2332 EDAM_format:1954 pearson fa EDAM_data:2046 fasta text/html default text/html html text/plain raw EDAM_format:1954 http://imgt.cines.fr/cgi-bin/IMGTlect.jv imgtligm gen3d gene3d hamap panther pfam pirsf prints prodom profile prosite smart ssf tigrfam tigrfams superfamily MIR:00000011 DRCAT:InterPro EDAM_topic:0595 MIR:00000011 DRCAT:InterPro interpro The InterPro database (Integrated Resource of Protein Domains and Functional Sites) is an integrated documentation resource for protein families, domains and functional sites. It was developed initially as a means of rationalising the complementary efforts of the PROSITE, PRINTS, Pfam and ProDom database projects, but now also includes the SMART, TIGRFAMs, PIR SuperFamilies and most recently SUPERFAMILY databases. InterPro IPR006212 IPR008266 IPR008958 IPR009030 IPR011009 EDAM_format:2331 EDAM_data:0907 default text/html default text/html html text/plain raw EDAM_format:2331 EDAM_format:2331 EDAM_data:0907 interpro text/html default text/html html text/html raw EDAM_format:2331 EDAM_format:2332 EDAM_data:0907 interproxml text/xml default text/xml raw EDAM_format:2332 tab text/html default text/html html text/plain raw http://www.ebi.ac.uk/interpro/ interpro ipd-kir DRCAT:IPD-KIR EDAM_topic:3042 DRCAT:IPD-KIR http://emboss.sourceforge.net/apps/cvs/emboss/apps/entret.html EMBOSS entret http://emboss.sourceforge.net/apps/cvs/emboss/apps/entret.html EMBOSS seqret http://www.ncbi.nlm.nih.gov/books/NBK1763/ NCBI BLAST blastdbcmd embl A centralised repository for human Killer-cell Immunoglobulin-like Receptor (KIR) sequences. IPD-KIR KIR00001 3DL3*005 EDAM_format:1927 em EDAM_data:2889 default text/html default text/html html text/plain raw EDAM_format:1927 EDAM_format:1927 EDAM_data:0855 annot text/html default text/html html text/plain raw EDAM_format:1927 EDAM_format:1927 em EDAM_data:2889 embl text/html default text/html html text/plain raw EDAM_format:1927 EDAM_format:2330 EDAM_data:2018 entrysize text/html default text/html html text/plain raw EDAM_format:2330 EDAM_format:2332 seqxml-0.4 EDAM_data:2046 seqxml text/xml default text/xml raw EDAM_format:2332 EDAM_format:1954 pearson fa EDAM_data:2046 fasta text/html default text/html html text/plain raw EDAM_format:1954 http://www.ebi.ac.uk/ipd/kir/ ipdkir EDAM_topic:3043 DRCAT:IPD-KIR http://www.ncbi.nlm.nih.gov/books/NBK1763/ NCBI BLAST blastdbcmd http://emboss.sourceforge.net/apps/cvs/emboss/apps/seqret.html EMBOSS seqret fasta A centralised repository for human Killer-cell Immunoglobulin-like Receptor (KIR) sequences. IPD-KIR (Protein) KIR00001 EDAM_format:1954 pearson fa EDAM_data:2047 default text/html default text/plain raw EDAM_format:1954 EDAM_format:1954 pearson fa EDAM_data:2047 fasta text/html default text/plain raw EDAM_format:1954 http://www.ebi.ac.uk/ipd/kir/ ipdkirp ipd-mhc DRCAT:IPD-MHC EDAM_topic:3042 DRCAT:IPD-MHC http://emboss.sourceforge.net/apps/cvs/emboss/apps/entret.html EMBOSS entret http://emboss.sourceforge.net/apps/cvs/emboss/apps/entret.html EMBOSS seqret http://www.ncbi.nlm.nih.gov/books/NBK1763/ NCBI BLAST blastdbcmd embl Sequences of the the major histocompatibility complex in a number of species. IPD-MHC MHC00001 Aona-DQA1*27:01 EDAM_format:1927 em EDAM_data:2889 default text/html default text/html html text/plain raw EDAM_format:1927 EDAM_format:1927 EDAM_data:0855 annot text/html default text/html html text/plain raw EDAM_format:1927 EDAM_format:1927 em EDAM_data:2889 embl text/html default text/html html text/plain raw EDAM_format:1927 EDAM_format:2330 EDAM_data:2018 entrysize text/html default text/html html text/plain raw EDAM_format:2330 EDAM_format:2332 seqxml-0.4 EDAM_data:2046 seqxml text/xml default text/xml raw EDAM_format:2332 EDAM_format:1954 pearson fa EDAM_data:2046 fasta text/html default text/html html text/plain raw EDAM_format:1954 http://www.ebi.ac.uk/ipd/mhc/ ipdmhc EDAM_topic:3043 DRCAT:IPD-MHC http://www.ncbi.nlm.nih.gov/books/NBK1763/ NCBI BLAST blastdbcmd http://emboss.sourceforge.net/apps/cvs/emboss/apps/seqret.html EMBOSS seqret fasta Sequences of the the major histocompatibility complex in a number of species. IPD-MHC (Protein) MHC00001 EDAM_format:1954 pearson fa EDAM_data:2047 default text/html default text/plain raw EDAM_format:1954 EDAM_format:1954 pearson fa EDAM_data:2047 fasta text/html default text/plain raw EDAM_format:1954 http://www.ebi.ac.uk/ipd/mhc/ ipdmhcp iprmatches interpro_matches interpro_matches_uniprotkb interpro_matches_complete EDAM_topic:0748 http://srs.bioinformatics.nl/ SRS@WBW iprmc InterPro Matches Complete (IPRMC) for UniProtKB proteins. IPRMC A0PGH6 A0A2V8 EDAM_format:2331 EDAM_data:1343 default text/html default text/html html text/plain raw EDAM_format:2331 EDAM_format:2331 EDAM_data:1343 iprmc text/html default text/html html text/html raw EDAM_format:2331 EDAM_format:2330 EDAM_data:1343 iprmctab text/html default text/html html text/plain raw EDAM_format:2330 EDAM_format:2332 EDAM_data:1343 iprmcxml text/xml default text/xml raw EDAM_format:2332 http://www.ebi.ac.uk/interpro/ iprmc iprmatchesuniparc iprmatches_uniparc interpro_matches_uniparc interpro_matches_complete_uniparc EDAM_topic:0748 iprmc InterPro Matches Complete (IPRMC) for UniParc proteins. IPRMC UniParc UPI0000000001 UPI0000046364 UPI00001B3DCE 28FE89850863372D EDAM_format:2331 EDAM_data:1343 default text/html default text/html html text/plain raw EDAM_format:2331 EDAM_format:2331 EDAM_data:1343 iprmc text/html default text/html html text/html raw EDAM_format:2331 EDAM_format:2330 EDAM_data:1343 iprmctab text/html default text/html html text/plain raw EDAM_format:2330 EDAM_format:2332 EDAM_data:1343 iprmcxml text/xml default text/xml raw EDAM_format:2332 http://www.ebi.ac.uk/interpro/ iprmcuniparc jpo_patent_proteins jpo_proteins jpo_prt jpop jpo EDAM_topic:3043 http://www.ebi.ac.uk/ebisearch/ EB-eye http://emboss.sourceforge.net/apps/cvs/emboss/apps/entret.html EMBOSS entret http://www.ncbi.nlm.nih.gov/books/NBK1763/ NCBI BLAST blastdbcmd http://emboss.sourceforge.net/apps/cvs/emboss/apps/seqret.html EMBOSS seqret embl Protein sequences appearing in patents from the Japanese Patent Office (JPO). JPO Proteins E50010 EDAM_format:1927 swissprot swiss em EDAM_data:2888 default text/html default text/html html text/plain raw EDAM_format:1927 EDAM_format:1927 EDAM_data:0855 annot text/html default text/html html text/plain raw EDAM_format:1927 EDAM_format:1927 swissprot swiss em EDAM_data:2888 embl text/html default text/html html text/plain raw EDAM_format:1927 EDAM_format:2330 EDAM_data:2018 entrysize text/html default text/html html text/plain raw EDAM_format:2330 EDAM_format:1954 pearson fa EDAM_data:2047 fasta text/html default text/html html text/plain raw EDAM_format:1954 EDAM_format:2332 seqxml-0.4 EDAM_data:2047 seqxml text/xml default text/xml raw EDAM_format:2332 http://www.ebi.ac.uk/patentdata/proteins/ jpo_prt kipo_patent_proteins kipo_proteins kipoprt kpop kipop kipo EDAM_topic:3043 http://www.ebi.ac.uk/ebisearch/ EB-eye http://emboss.sourceforge.net/apps/cvs/emboss/apps/entret.html EMBOSS entret http://www.ncbi.nlm.nih.gov/books/NBK1763/ NCBI BLAST blastdbcmd http://emboss.sourceforge.net/apps/cvs/emboss/apps/seqret.html EMBOSS seqret embl Protein sequences appearing in patents from the Korean Intellectual Property Office (KIPO). KIPO Proteins DI500001 EDAM_format:1927 swissprot swiss em EDAM_data:2888 default text/html default text/html html text/plain raw EDAM_format:1927 EDAM_format:1927 EDAM_data:0855 annot text/html default text/html html text/plain raw EDAM_format:1927 EDAM_format:1927 swissprot swiss em EDAM_data:2888 embl text/html default text/html html text/plain raw EDAM_format:1927 EDAM_format:2330 EDAM_data:2018 entrysize text/html default text/html html text/plain raw EDAM_format:2330 EDAM_format:1954 pearson fa EDAM_data:2047 fasta text/html default text/html html text/plain raw EDAM_format:1954 EDAM_format:2332 seqxml-0.4 EDAM_data:2047 seqxml text/xml default text/xml raw EDAM_format:2332 http://www.ebi.ac.uk/patentdata/proteins/ kipo_prt pubmed MIR:00000015 EDAM_topic:0606 MIR:00000015 http://europepmc.org/ Europe PMC http://eutils.ncbi.nlm.nih.gov/ NCBI E-utilities medlinefull MEDLINE contains bibliographic citations and author abstracts from more than 5,000 biomedical journals published in the United States and 70 other countries. The files contains over 19 million citations dating back to the mid-1940's, updated weekly. MEDLINE 1 2859121 17567924 EDAM_format:2331 EDAM_format:2848 EDAM_data:0970 default text/html default text/html html text/plain raw EDAM_format:2331 EDAM_format:2848 EDAM_format:2331 EDAM_format:2848 EDAM_data:0970 medlinefull text/html default text/html html text/plain raw EDAM_format:2331 EDAM_format:2848 EDAM_format:2331 EDAM_format:2848 EDAM_data:0970 medlineref text/html default text/html html text/plain raw EDAM_format:2331 EDAM_format:2848 EDAM_format:1964 EDAM_format:2848 EDAM_data:0970 bibtex text/html default text/plain raw EDAM_format:1964 EDAM_format:2848 EDAM_format:1964 EDAM_format:2848 EDAM_data:0970 endnote text/html default text/plain raw EDAM_format:1964 EDAM_format:2848 EDAM_format:1964 EDAM_format:2848 EDAM_data:0970 isi text/html default text/plain raw EDAM_format:1964 EDAM_format:2848 EDAM_format:2332 EDAM_format:2848 EDAM_data:0970 modsxml text/xml default text/xml raw EDAM_format:2332 EDAM_format:2848 EDAM_format:2332 EDAM_format:2848 medlinexml xml EDAM_data:0970 pubmedxml text/xml default text/xml raw EDAM_format:2332 EDAM_format:2848 EDAM_format:1964 EDAM_format:2848 EDAM_data:0970 ris text/html default text/plain raw EDAM_format:1964 EDAM_format:2848 EDAM_format:2332 EDAM_format:2848 EDAM_data:0970 wordbibxml text/xml default text/xml raw EDAM_format:2332 EDAM_format:2848 http://www.nlm.nih.gov/pubs/factsheets/medline.html medline EDAM_topic:3042 http://srs.ebi.ac.uk/ SRS@EMBL-EBI http://www.ncbi.nlm.nih.gov/books/NBK1763/ NCBI BLAST blastdbcmd nrl1 Non-redundant patent nucleotides level-1. Nucleotide sequences from patents clustered by 100% sequence identity over whole length. Patent DNA NRL1 NRN_DJ207917 EDAM_format:2181 EDAM_data:2889 EDAM_data:1246 default text/html default text/html html text/plain raw EDAM_format:2181 EDAM_format:2181 EDAM_data:0855 EDAM_data:1246 annot text/html default text/html html text/plain raw EDAM_format:2181 EDAM_format:2330 EDAM_data:2018 entrysize text/html default text/html html text/plain raw EDAM_format:2330 EDAM_format:1954 pearson fa EDAM_data:2046 fasta text/html default text/html html text/plain raw EDAM_format:1954 EDAM_format:2181 EDAM_data:2889 EDAM_data:1246 nrl1 text/html default text/html html text/plain raw EDAM_format:2181 EDAM_format:2332 seqxml-0.4 EDAM_data:2046 seqxml text/xml default text/xml raw EDAM_format:2332 http://www.ebi.ac.uk/patentdata/nr/ nrnl1 EDAM_topic:3042 http://srs.ebi.ac.uk/ SRS@EMBL-EBI http://www.ncbi.nlm.nih.gov/books/NBK1763/ NCBI BLAST blastdbcmd nrl2 Non-redundant patent nucleotides level-2. Nucleotide sequences from patents clustered by patent family and then by 100% sequence identity over whole length. Patent DNA NRL2 NRN006674C5 EDAM_format:2181 EDAM_data:2889 default text/html default text/html html text/plain raw EDAM_format:2181 EDAM_format:2181 EDAM_data:0855 annot text/html default text/html html text/plain raw EDAM_format:2181 EDAM_format:2330 EDAM_data:2018 entrysize text/html default text/html html text/plain raw EDAM_format:2330 EDAM_format:1954 pearson fa EDAM_data:2046 fasta text/html default text/html html text/plain raw EDAM_format:1954 EDAM_format:2181 EDAM_data:2889 nrl2 text/html default text/html html text/plain raw EDAM_format:2181 EDAM_format:2332 seqxml-0.4 EDAM_data:2046 seqxml text/xml default text/xml raw EDAM_format:2332 http://www.ebi.ac.uk/patentdata/nr/ nrnl2 EDAM_topic:3043 http://srs.ebi.ac.uk/ SRS@EMBL-EBI http://www.ncbi.nlm.nih.gov/books/NBK1763/ NCBI BLAST blastdbcmd nrl1 Non-redundant patent proteins level-1. Protein sequences from patents clustered by 100% sequence identity over whole length. Patent Protein NRL1 NRP_AX013047 EDAM_format:2181 EDAM_data:2888 EDAM_data:1246 default text/html default text/html html text/plain raw EDAM_format:2181 EDAM_format:2181 EDAM_data:0855 EDAM_data:1246 annot text/html default text/html html text/plain raw EDAM_format:2181 EDAM_format:2330 EDAM_data:2018 entrysize text/html default text/html html text/plain raw EDAM_format:2330 EDAM_format:1954 pearson fa EDAM_data:2047 fasta text/html default text/html html text/plain raw EDAM_format:1954 EDAM_format:2181 EDAM_data:2888 EDAM_data:1246 nrl1 text/html default text/html html text/plain raw EDAM_format:2181 EDAM_format:2332 seqxml-0.4 EDAM_data:2047 seqxml text/xml default text/xml raw EDAM_format:2332 http://www.ebi.ac.uk/patentdata/nr/ nrpl1 EDAM_topic:3043 http://srs.ebi.ac.uk/ SRS@EMBL-EBI http://www.ncbi.nlm.nih.gov/books/NBK1763/ NCBI BLAST blastdbcmd nrl2 Non-redundant patent proteins level-2. Protein sequences from patents clustered by patent family and then by 100% sequence identity over whole length. Patent Protein NRL2 NRP00000001 EDAM_format:2181 EDAM_data:2888 default text/html default text/html html text/plain raw EDAM_format:2181 EDAM_format:2181 EDAM_data:0855 annot text/html default text/html html text/plain raw EDAM_format:2181 EDAM_format:2330 EDAM_data:2018 entrysize text/html default text/html html text/plain raw EDAM_format:2330 EDAM_format:1954 pearson fa EDAM_data:2047 fasta text/html default text/html html text/plain raw EDAM_format:1954 EDAM_format:2181 EDAM_data:2888 nrl2 text/html default text/html html text/plain raw EDAM_format:2181 EDAM_format:2332 seqxml-0.4 EDAM_data:2047 seqxml text/xml default text/xml raw EDAM_format:2332 http://www.ebi.ac.uk/patentdata/nr/ nrpl2 patentequivalents patent_families patentfamilies http://srs.ebi.ac.uk/ SRS@EMBL-EBI patent_equivalents Patent number equivalents (families) and patent classifications for patents containing sequence data. The patent equivalents are obtained from the patent numbers cited in the major sequence databases (e.g. EMBL-Bank and Patent Proteins), which are them expanded into a set of patent equivalents forming a WIPO Simple Patent Family. Patent Equivalents 10517942 patentequivalents default text/html default text/html html text/plain raw patentequivalents patent_equivalents text/html default text/html html text/plain raw http://www.ebi.ac.uk/patentdata/ patent_equivalents msd pdbe pdbj pre_pdb MIR:00000020 DRCAT:PDB EDAM_topic:3038 MIR:00000020 DRCAT:PDB http://emboss.sourceforge.net/apps/cvs/emboss/apps/seqret.html EMBOSS seqret ftp://ftp.ebi.ac.uk/pub/databases/rcsb/ PDB FTP@EMBL-EBI http://www.ebi.ac.uk/pdbe/ PDBe http://www.rcsb.org/pdb/ RCSB PDB http://www.pdbj.org/ PDBj http://www.wwpdb.org/ wwPDB ftp://ftp.ebi.ac.uk/pub/databases/msd/pdb_uncompressed/ PDBe FTP@EMBL-EBI pdb Macromolecular structures from the Brookhaven Protein Data Bank (PDB). Contains protein and nucleotide structure and sequence data. PDB 101D 1GAG 10MH 3E3Q 3E3Q_A 3E3Q_a 3E3QA 3E3Qa EDAM_format:1476 ent EDAM_data:0883 default text/html default text/html html text/plain raw EDAM_format:1476 EDAM_format:1954 pearson fa EDAM_data:2043 fasta text/html default text/plain raw EDAM_format:1954 EDAM_format:1475 EDAM_data:2765 annot text/html default text/html html text/plain raw EDAM_format:1475 EDAM_format:1477 cif EDAM_data:0883 mmcif text/html default text/plain raw EDAM_format:1477 EDAM_format:1476 ent EDAM_data:0883 pdb text/html default text/html html text/plain raw EDAM_format:1476 EDAM_format:1478 xml EDAM_data:0883 pdbml text/html default text/xml raw EDAM_format:1478 rdf rdfxml text/xml default text/xml raw http://www.ebi.ac.uk/pdbe/ pdb refseqnew refseqrelease refseqgen refseqgennew refseqgenrel EDAM_topic:3042 MIR:00000039 DRCAT:RefSeq http://eutils.ncbi.nlm.nih.gov/ NCBI E-utilities http://www.dkfz.de/srs/ SRS@DKFZ refseq The NCBI Reference Sequence project (RefSeq) provides reference sequence standards for the naturally occurring molecules of the central dogma, from chromosomes to mRNAs to proteins. RefSeq (nucleotide) AC_000014 NC_004952 NG_000869 NM_000231 NR_000003 NS_000193 NT_113950 NW_001031896 NZ_JH621247 XM_001000025 110189662 32455353 149879847 209529740 AC_000014.1 NC_004952.1 NG_000869.2 NM_000231.2 EDAM_format:1936 genbank gb EDAM_data:2889 default text/html default text/html html text/plain raw EDAM_format:1936 EDAM_format:1936 EDAM_data:0855 annot text/html default text/html html text/plain raw EDAM_format:1936 EDAM_format:2330 EDAM_data:2018 entrysize text/html default text/html html text/plain raw EDAM_format:2330 EDAM_format:1954 pearson fa EDAM_data:2043 fasta text/html default text/html html text/plain raw EDAM_format:1954 EDAM_format:2185 insdxml-1.4 EDAM_data:2889 insdxml text/xml default text/xml raw EDAM_format:2185 EDAM_format:1936 genbank gb EDAM_data:2889 refseq text/html default text/html html text/plain raw EDAM_format:1936 EDAM_format:2332 seqxml-0.4 EDAM_data:2046 seqxml text/xml default text/xml raw EDAM_format:2332 EDAM_format:2332 EDAM_data:2043 tinyseq text/html default text/xml raw EDAM_format:2332 http://www.ncbi.nlm.nih.gov/refseq/ refseqn refseqpnew refseqprelease refseqprot refseqprotnew refseqprotrel EDAM_topic:3043 MIR:00000039 DRCAT:RefSeq http://eutils.ncbi.nlm.nih.gov/ NCBI E-utilities http://www.dkfz.de/srs/ SRS@DKFZ refseqp The NCBI Reference Sequence project (RefSeq) provides reference sequence standards for the naturally occurring molecules of the central dogma, from chromosomes to mRNAs to proteins. RefSeq (protein) AP_000130 NP_001075859 XP_001001333 YP_001876438 56160459 126723201 AP_000130.1 NP_001075859.1 EDAM_format:1936 genpept genbank gb EDAM_data:2888 default text/html default text/html html text/plain raw EDAM_format:1936 EDAM_format:1958 EDAM_format:1936 EDAM_data:0855 annot text/html default text/html html text/plain raw EDAM_format:1958 EDAM_format:1936 EDAM_format:2330 EDAM_data:2018 entrysize text/html default text/html html text/plain raw EDAM_format:2330 EDAM_format:1954 pearson fa EDAM_data:2043 fasta text/html default text/html html text/plain raw EDAM_format:1954 EDAM_format:2185 insdxml-1.4 EDAM_data:2888 insdxml text/xml default text/xml raw EDAM_format:2185 EDAM_format:1936 genpept genbank gb EDAM_data:2888 refseqp text/html default text/html html text/plain raw EDAM_format:1936 EDAM_format:2332 seqxml-0.4 EDAM_data:2047 seqxml text/xml default text/xml raw EDAM_format:2332 EDAM_format:2332 EDAM_data:2043 tinyseq text/html default text/xml raw EDAM_format:2332 http://www.ncbi.nlm.nih.gov/refseq/ refseqp targetdb EDAM_topic:3038 http://srs.ebi.ac.uk/ SRS@EMBL-EBI http://www.ncbi.nlm.nih.gov/books/NBK1763/ NCBI BLAST blastdbcmd http://emboss.sourceforge.net/apps/cvs/emboss/apps/seqret.html EMBOSS seqret sgtxml Structural Genomics Targets (SGT) is a protein target registration database, providing information on the experimental progress and status of target amino acid sequences selected for structural determination. SGT 1 283832 APC4091 IGBMC-0038-000 IPRv2949cPALZ YCL050c EDAM_format:2332 targetdbxml EDAM_data:2888 default text/html default text/plain raw EDAM_format:2332 EDAM_format:1964 EDAM_data:2765 annot text/html default text/html html text/plain raw EDAM_format:1964 EDAM_format:1954 pearson fa EDAM_data:2047 fasta text/html default text/html html text/plain raw EDAM_format:1954 EDAM_format:2332 seqxml-0.4 EDAM_data:2047 seqxml text/xml default text/xml raw EDAM_format:2332 EDAM_format:2332 targetdbxml EDAM_data:2888 sgtxml text/xml default text/xml raw EDAM_format:2332 http://targetdb.pdb.org/ sgt ncbi_taxonomy ncbi_taxid taxid taxon newt MIR:00000006 DRCAT:taxon EDAM_topic:0637 MIR:00000006 DRCAT:taxon http://www.ebi.ac.uk/ebisearch/ EB-eye http://www.ebi.ac.uk/ena/ ENA Browser http://www.uniprot.org/ UniProt.org http://emboss.sourceforge.net/apps/cvs/emboss/apps/taxget.html EMBOSS taxget http://www.dkfz.de/srs/ SRS@DKFZ taxonomy Taxonomic classification of organisms for which there are sequences in the INSDC databases (i.e. DDBJ, EMBL-Bank and GenBank) and many other biological databases. Taxonomy 3702 9606 EDAM_format:2181 ebi_taxon ebi EDAM_data:3028 default text/html default text/html html text/plain raw EDAM_format:2181 EDAM_format:2181 ebi_taxon ebi EDAM_data:3028 taxonomy text/html default text/html html text/plain raw EDAM_format:2181 EDAM_format:2332 enaxml EDAM_data:3028 enataxonomyxml text/xml default text/xml raw EDAM_format:2332 EDAM_format:2332 EDAM_format:2376 rdfxml EDAM_data:3028 uniprottaxonomyrdfxml text/xml default text/xml raw EDAM_format:2332 EDAM_format:2376 tax EDAM_data:3028 emboss_tax text/html default text/plain raw ncbi EDAM_data:3028 ncbi_taxon text/html default text/plain raw EDAM_format:2330 excel EDAM_data:3028 tab text/html default text/plain raw EDAM_format:2330 http://www.ncbi.nlm.nih.gov/Taxonomy/ taxonomy EDAM_topic:3042 http://www.ebi.ac.uk/ena/ ENA Browser fastq An archive of capillary electrophoresis trace data. Trace Archive TI1 TI1941166100 EDAM_format:2182 fastq-sanger EDAM_data:0924 default text/html default text/plain raw EDAM_format:2182 EDAM_format:1954 pearson fa EDAM_data:2046 fasta text/html default text/plain raw EDAM_format:1954 EDAM_format:2182 fastq-sanger EDAM_data:0924 fastq text/html default text/plain raw EDAM_format:2182 EDAM_format:2332 EDAM_data:2018 tracexml text/xml default text/xml raw EDAM_format:2332 http://www.ebi.ac.uk/ena/ tracearchive uniprot_archive flybase h_inv pir pirarc prf remtrembl sgd tair_arabidopsis trembl_varsplic tremblnew trome unimes vega wormbase MIR:00000041 DRCAT:UniParc EDAM_topic:3043 MIR:00000041 DRCAT:UniParc http://www.uniprot.org/ UniProt.org http://www.ncbi.nlm.nih.gov/books/NBK1763/ NCBI BLAST blastdbcmd http://emboss.sourceforge.net/apps/cvs/emboss/apps/seqret.html EMBOSS seqret http://srs.ebi.ac.uk/ SRS@EMBL-EBI uniparc The UniProt Archive (UniParc) contains available protein sequences collected from many different sources. The sequence data are archived to facilitate examination of changes to sequence data. Search UniParc if you want to examine the "history" of a particular sequence. UniParc UPI0000000001 UPI0000046364 UPI00001B3DCE EDAM_format:2332 uniparcxml xml EDAM_data:2888 default text/html default text/plain raw EDAM_format:2332 EDAM_format:2187 EDAM_data:0849 EDAM_data:1208 annot text/html default text/html html text/plain raw EDAM_format:2187 EDAM_format:1954 pearson fa EDAM_data:2047 fasta text/html default text/plain raw EDAM_format:1954 EDAM_format:2332 seqxml-0.4 EDAM_data:2047 seqxml text/xml default text/xml raw EDAM_format:2332 EDAM_format:2332 uniparcxml xml EDAM_data:2888 uniparc text/html default text/xml raw EDAM_format:2332 EDAM_format:2187 EDAM_data:0849 EDAM_data:1208 uniparcflat text/html default text/html html text/plain raw EDAM_format:2187 EDAM_format:2332 EDAM_format:2376 uniparcrdfxml uniparcrdf rdfxml rdf EDAM_data:0849 EDAM_data:1208 uniprotrdfxml text/xml default text/xml raw EDAM_format:2332 EDAM_format:2376 http://www.uniprot.org/ uniparc sptrembl swall swissprot trembl uniprot uniprotkb_swissprot uniprotkb_swissprotsv uniprotkb_trembl uniprotkb_archaea uniprotkb_arthropoda uniprotkb_bacteria uniprotkb_complete_microbial_proteomes uniprotkb_eukaryota uniprotkb_fungi uniprotkb_human uniprotkb_mammals uniprotkb_nematoda uniprotkb_pdb uniprotkb_rodents uniprotkb_vertebrates uniprotkb_viridiplantae uniprotkb_viruses uniprotsv uniprot_archaea uniprot_arthropoda uniprot_bacteria uniprot_complete_microbial_proteomes uniprot_eukaryota uniprot_fungi uniprot_human uniprot_mammals uniprot_nematoda uniprot_pdb uniprot_rodents uniprot_vertebrates uniprot_viridiplantae uniprot_viruses sp tr sw swiss uniprotxml MIR:00000005 DRCAT:UniProt EDAM_topic:3043 MIR:00000005 DRCAT:UniProt http://www.uniprot.org/ UniProt.org http://www.ncbi.nlm.nih.gov/books/NBK1763/ NCBI BLAST blastdbcmd http://emboss.sourceforge.net/apps/cvs/emboss/apps/entret.html EMBOSS entret http://www.dkfz.de/srs/ SRS@DKFZ http://srs.ebi.ac.uk/ SRS@EMBL-EBI uniprot The UniProt Knowledgebase (UniProtKB) is the central access point for extensive curated protein information, including function, classification, and cross-references. Search UniProtKB to retrieve “everything that is known” about a particular sequence. UniProtKB P06213 P29306 P68255 INSR_HUMAN 1433X_MAIZE 1433T_RAT EDAM_format:1977 swissprot swiss sw uniprotkb EDAM_data:2888 default text/html default text/html html text/plain raw EDAM_format:1977 EDAM_format:1977 EDAM_data:0855 EDAM_data:1230 annot text/html default text/html html text/plain raw EDAM_format:1977 EDAM_format:2330 EDAM_data:2018 entrysize text/html default text/html html text/plain raw EDAM_format:2330 EDAM_format:1954 pearson fa EDAM_data:2047 fasta text/html default text/html html text/plain raw EDAM_format:1954 EDAM_format:1975 gff EDAM_data:1272 gff3 text/html default text/html html text/plain raw EDAM_format:1975 EDAM_format:2332 seqxml-0.4 EDAM_data:2047 seqxml text/xml default text/xml raw EDAM_format:2332 EDAM_format:1977 swissprot swiss sw uniprotkb EDAM_data:2888 uniprot text/html default text/html html text/plain raw EDAM_format:1977 EDAM_format:2332 EDAM_format:2376 uniprotkbrdfxml uniprotkbrdf rdfxml rdf EDAM_data:0849 EDAM_data:1208 EDAM_data:1230 uniprotrdfxml text/xml default text/xml raw EDAM_format:2332 EDAM_format:2376 EDAM_format:2332 uniprotkbxml xml EDAM_data:2888 uniprotxml text/xml default text/xml raw EDAM_format:2332 http://www.uniprot.org/ uniprotkb ur100 EDAM_topic:3043 DRCAT:UniRef http://www.uniprot.org/ UniProt.org http://www.ncbi.nlm.nih.gov/books/NBK1763/ NCBI BLAST blastdbcmd http://www.dkfz.de/srs/ SRS@DKFZ http://srs.ebi.ac.uk/ SRS@EMBL-EBI uniref100 The UniProt Reference Clusters (UniRef) databases combine closely related sequences into a single record to speed searches. There are three different non-redundant databases with different sequence identity cut-offs. In UniRef100, UniRef90 and UniRef50 databases no pair of sequences in the representative set has >100%, >90% or >50% mutual sequence identity. The three UniRef databases allow the user to choose between a fast search and a truly comprehensive one. UniRef100 UniRef100_P06213 EDAM_format:2332 uniref100xml xml EDAM_data:2888 default text/html default text/plain raw EDAM_format:2332 EDAM_format:1954 pearson fa EDAM_data:2047 fasta text/html default text/plain raw EDAM_format:1954 EDAM_format:2332 seqxml-0.4 EDAM_data:2047 seqxml text/xml default text/xml raw EDAM_format:2332 EDAM_format:2332 EDAM_format:2376 uniref100rdfxml uniref100rdf rdfxml rdf EDAM_data:0849 EDAM_data:1208 uniprotrdfxml text/xml default text/xml raw EDAM_format:2332 EDAM_format:2376 EDAM_format:2332 uniref100xml xml EDAM_data:2888 uniref100 text/html default text/xml raw EDAM_format:2332 http://www.uniprot.org/ uniref100 ur050 EDAM_topic:3043 DRCAT:UniRef http://www.uniprot.org/ UniProt.org http://www.ncbi.nlm.nih.gov/books/NBK1763/ NCBI BLAST blastdbcmd http://www.dkfz.de/srs/ SRS@DKFZ http://srs.ebi.ac.uk/ SRS@EMBL-EBI uniref50 The UniProt Reference Clusters (UniRef) databases combine closely related sequences into a single record to speed searches. There are three different non-redundant databases with different sequence identity cut-offs. In UniRef100, UniRef90 and UniRef50 databases no pair of sequences in the representative set has >100%, >90% or >50% mutual sequence identity. The three UniRef databases allow the user to choose between a fast search and a truly comprehensive one. UniRef50 UniRef50_P06213 EDAM_format:2332 uniref50xml xml EDAM_data:2888 default text/html default text/plain raw EDAM_format:2332 EDAM_format:1954 pearson fa EDAM_data:2047 fasta text/html default text/plain raw EDAM_format:1954 EDAM_format:2332 seqxml-0.4 EDAM_data:2047 seqxml text/xml default text/xml raw EDAM_format:2332 EDAM_format:2332 EDAM_format:2376 uniref50rdfxml uniref50rdf rdfxml rdf EDAM_data:0849 EDAM_data:1208 uniprotrdfxml text/xml default text/xml raw EDAM_format:2332 EDAM_format:2376 EDAM_format:2332 uniref50xml xml EDAM_data:2888 uniref50 text/html default text/xml raw EDAM_format:2332 http://www.uniprot.org/ uniref50 ur090 EDAM_topic:3043 DRCAT:UniRef http://www.uniprot.org/ UniProt.org http://www.ncbi.nlm.nih.gov/books/NBK1763/ NCBI BLAST blastdbcmd http://www.dkfz.de/srs/ SRS@DKFZ http://srs.ebi.ac.uk/ SRS@EMBL-EBI uniref90 The UniProt Reference Clusters (UniRef) databases combine closely related sequences into a single record to speed searches. There are three different non-redundant databases with different sequence identity cut-offs. In UniRef100, UniRef90 and UniRef50 databases no pair of sequences in the representative set has >100%, >90% or >50% mutual sequence identity. The three UniRef databases allow the user to choose between a fast search and a truly comprehensive one. UniRef90 UniRef90_P06213 EDAM_format:2332 uniref90xml xml EDAM_data:2888 default text/html default text/plain raw EDAM_format:2332 EDAM_format:1954 pearson fa EDAM_data:2047 fasta text/html default text/plain raw EDAM_format:1954 EDAM_format:2332 seqxml-0.4 EDAM_data:2047 seqxml text/xml default text/xml raw EDAM_format:2332 EDAM_format:2332 EDAM_format:2376 uniref90rdfxml uniref90rdf rdfxml rdf EDAM_data:0849 EDAM_data:1208 uniprotrdfxml text/xml default text/xml raw EDAM_format:2332 EDAM_format:2376 EDAM_format:2332 uniref90xml xml EDAM_data:2888 uniref90 text/html default text/xml raw EDAM_format:2332 http://www.uniprot.org/ uniref90 uniprotkb_sequence_annotation_version_archive DRCAT:UniSave EDAM_topic:3043 MIR:00000005 DRCAT:UniSave http://www.ebi.ac.uk/uniprot/unisave/ UniSave uniprot The UniProtKB Sequence/Annotation Version Archive (UniSave) is a repository of UniProtKB/Swiss-Prot and UniProtKB/TrEMBL entry versions. UniSave P06213 P06213.157 P06213.3 INSR_HUMAN EDAM_format:1977 swissprot swiss EDAM_data:2888 default text/html default text/plain raw EDAM_format:1977 EDAM_format:1977 EDAM_data:0855 EDAM_data:1230 annot text/html default text/plain raw EDAM_format:1977 EDAM_format:2330 EDAM_data:2018 entrysize text/html default text/html html text/plain raw EDAM_format:2330 EDAM_format:1954 pearson fa EDAM_data:2047 fasta text/html default text/plain raw EDAM_format:1954 EDAM_format:1977 swissprot swiss EDAM_data:2888 uniprot text/html default text/plain raw EDAM_format:1977 http://www.ebi.ac.uk/uniprot/unisave/ unisave uspto_patent_proteins uspto_proteins usptoprt uspop uspo_prt uspto EDAM_topic:3043 http://www.ebi.ac.uk/ebisearch/ EB-eye http://emboss.sourceforge.net/apps/cvs/emboss/apps/entret.html EMBOSS entret http://www.ncbi.nlm.nih.gov/books/NBK1763/ NCBI BLAST blastdbcmd http://emboss.sourceforge.net/apps/cvs/emboss/apps/seqret.html EMBOSS seqret embl Protein sequences appearing in patents from the United States Patent and Trademark Office (USPTO). USPTO Proteins AAA00053 I02590 AAA00053.1 EDAM_format:1927 swissprot swiss em EDAM_data:2888 default text/html default text/html html text/plain raw EDAM_format:1927 EDAM_format:1927 EDAM_data:0855 annot text/html default text/html html text/plain raw EDAM_format:1927 EDAM_format:1927 swissprot swiss em EDAM_data:2888 embl text/html default text/html html text/plain raw EDAM_format:1927 EDAM_format:2330 EDAM_data:2018 entrysize text/html default text/html html text/plain raw EDAM_format:2330 EDAM_format:1954 pearson fa EDAM_data:2047 fasta text/html default text/html html text/plain raw EDAM_format:1954 EDAM_format:2332 seqxml-0.4 EDAM_data:2047 seqxml text/xml default text/xml raw EDAM_format:2332 http://www.ebi.ac.uk/patentdata/proteins/ uspto_prt