Class Biojs.UniProtDiseaseSummary
Version
1.0.0.
Extends
Biojs.
Defined in: Biojs.UniProtDiseaseSummary.js.
| Constructor Attributes | Constructor Name and Description |
|---|---|
|
Biojs.UniProtDiseaseSummary(options)
Component to present UniProt disease information.
|
| Field Attributes | Field Name and Description |
|---|---|
| <inner> |
Array containing the supported event names
|
| <inner> |
Default values for the options
|
| Method Attributes | Method Name and Description |
|---|---|
|
constructor(options)
|
|
|
setUniProtDasUrl(uniProtDasUrl)
Set an URL to start the query and visualization
|
- Methods borrowed from class Biojs:
- addListener, extend, getId, listen, raiseEvent, setEventHandlers, setOptions
Class Detail
Biojs.UniProtDiseaseSummary(options)
Component to present UniProt disease information.
Author: Rafael C Jimenez.
Author: Rafael C Jimenez.
var instance = new Biojs.UniProtDiseaseSummary({
target: 'YourOwnDivId',
uniProtDasUrl: 'http://www.ebi.ac.uk/das-srv/uniprot/das/uniprot/features?segment=P08123;type=BS:01019',
keywordFiltereing: ['osteogenesis','lipoblastoma'],
proxyUrl: '../biojs/dependencies/proxy/proxy.php',
width: '100%',
referencesColumnWidth: '150px',
tableHeader: false,
componentTitle: false
});
- Parameters:
- {Object} options
- An object with the options for this component.
- Options detailed:
- {string} target
- Identifier of the DIV tag where the component should be displayed.
- {string} uniProtDasUrl
- Url pointing to an XML including UniProt infomration in DAS format
- {string} keywordFiltereing
- [['cancer','brain']] List of keywords to filter disease information
- {string} [proxyUrl='../biojs/dependencies/proxy/proxy.php']
- Since the same origin policy (http://en.wikipedia.org/wiki/Same_origin_policy) in the browsers Biojs include a proxy script in PHP which redirects Ajax requests from local to any other domain. You can use tour own proxy script by modifying this value.
- {string} width
- [100%] Defines the width of the component
- {string} referencesColumnWidth
- [200px] Defines the width of the columns with reference links
- {boolean} tableHeader
- Boolean value to control the display of the table header
- {boolean} componentTitle
- Boolean value to control the display of the title of the component
- Requires:
- jQuery 1.7.2
- Biojs.UniProtDiseaseSummary.css
Field Detail
<inner>
eventTypes
Array containing the supported event names
<inner>
opt
Default values for the options
Method Detail
constructor(options)
- Parameters:
- options
setUniProtDasUrl(uniProtDasUrl)
Set an URL to start the query and visualization
instance.setUniProtDasUrl("http://www.ebi.ac.uk/das-srv/uniprot/das/uniprot/features?segment=P37173;type=BS:01019");
instance.setUniProtDasUrl("http://www.ebi.ac.uk/das-srv/uniprot/das/uniprot/features?segment=P08123;type=BS:01019");
- Parameters:
- {string} uniProtDasUrl
- DAS XML