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GO:0051880 G-quadruplex DNA binding

Term Information

ID GO:0051880
Name G-quadruplex DNA binding
Ontology Molecular Function
Definition Interacting selectively and non-covalently with G-quadruplex DNA structures, in which groups of four guanines adopt a flat, cyclic Hoogsteen hydrogen-bonding arrangement known as a guanine tetrad. The stacking of guanine tetrads results in G-quadruplex DNA structures. G-quadruplex DNA can form under physiological conditions from some G-rich sequences, such as those found in telomeres, immunoglobulin switch regions, gene promoters, fragile X repeats, and the dimerization domain in the human immunodeficiency virus (HIV) genome.
PMID:16142245 PMID:9512530
GONUTS GO:0051880 Wiki Page

Synonyms

Synonyms are alternative words or phrases closely related in meaning to the term name, with indication of the relationship between the name and synonym given by the synonym scope. Click on the icon for more details.
Type Synonym
exact G-DNA binding
exact quadruplex DNA binding
exact tetraplex DNA binding
exact G quartet DNA binding
broad G-quartet binding
exact G quadruplex DNA binding
exact G-quartet DNA binding
broad G quartet binding

Annotation Guidance

Usage of this term is subject to the following annotation guidelines:
Annotation Guidelines
Binding term considerationsLink
Considerations when annotating from ChiP assay resultsLink

Ancestor Chart

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Child Terms

This table lists all terms that are direct descendants (child terms) of GO:0051880:
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Protein Annotation

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Co-occurring Terms

These tables show the number of times the term listed in the table has been co-annotated with GO:0051880. The terms are listed in descending order of number of times the term has been co-annotated.
The table on the left is calculated using both electronic and manual-evidenced annotations, while the table on the right is calculated using only manual-evidenced annotations.
Co-occurrence statistics for GO:0051880 based on the entire annotation set Co-occurrence statistics for GO:0051880 based on non-IEA annotations only

Change Log

All changes

Timestamp Action Category Detail
2009-10-27 Deleted SYNONYM G-quartet binding
2009-10-27 Added SYNONYM G quartet DNA binding
2009-10-27 Added SYNONYM G quartet binding
2009-10-27 Added SYNONYM G-quartet DNA binding
2009-10-27 Added SYNONYM G quadruplex DNA binding
2009-10-27 Added SYNONYM G-quartet binding
2009-07-03 Deleted DEFINITION Interacting selectively with G-quadruplex DNA structures, in which groups of four guanines adopt a flat, cyclic Hoogsteen hydrogen-bonding arrangement known as a guanine tetrad. The stacking of guanine tetrads results in G-quadruplex DNA structures. G-quadruplex DNA can form under physiological conditions from some G-rich sequences, such as those found in telomeres, immunoglobulin switch regions, gene promoters, fragile X repeats, and the dimerization domain in the human immunodeficiency virus (HIV) genome.
2009-07-03 Added DEFINITION Interacting selectively and non-covalently with G-quadruplex DNA structures, in which groups of four guanines adopt a flat, cyclic Hoogsteen hydrogen-bonding arrangement known as a guanine tetrad. The stacking of guanine tetrads results in G-quadruplex DNA structures. G-quadruplex DNA can form under physiological conditions from some G-rich sequences, such as those found in telomeres, immunoglobulin switch regions, gene promoters, fragile X repeats, and the dimerization domain in the human immunodeficiency virus (HIV) genome.
2008-05-13 Added DEFINITION Interacting selectively with G-quadruplex DNA structures, in which groups of four guanines adopt a flat, cyclic Hoogsteen hydrogen-bonding arrangement known as a guanine tetrad. The stacking of guanine tetrads results in G-quadruplex DNA structures. G-quadruplex DNA can form under physiological conditions from some G-rich sequences, such as those found in telomeres, immunoglobulin switch regions, gene promoters, fragile X repeats, and the dimerization domain in the human immunodeficiency virus (HIV) genome.
2008-05-12 Deleted DEFINITION Interacting selectively with G-quadruplex DNA structures, in which groups of four guanines adopt a flat, cyclic Hoogsteen hydrogen-bonding arrangement known as a guanine tetrad. The stacking of guanine tetrads results in G-quadruplex DNA structures. G-quadruplex DNA can form under physiological conditions from some G-rich sequences, such as those found in telomeres, immunoglobulin switch regions, gene promoters, fragile X repeats, and the dimerization domain in the human immunodeficiency virus (HIV) genome.
2008-04-01 Updated RELATION is a GO:0043566 (structure-specific DNA binding)
2007-08-09 Added SYNONYM G-DNA binding
2007-08-09 Added SYNONYM G-quartet binding
2007-08-09 Added SYNONYM quadruplex DNA binding
2007-08-09 Added SYNONYM tetraplex DNA binding
2007-08-09 Deleted SYNONYM G-DNA binding
2007-08-09 Deleted SYNONYM G-quartet binding
2007-08-09 Deleted SYNONYM quadruplex DNA binding
2007-08-09 Deleted SYNONYM tetraplex DNA binding
2006-02-10 Added DEFINITION Interacting selectively with G-quadruplex DNA structures, in which groups of four guanines adopt a flat, cyclic Hoogsteen hydrogen-bonding arrangement known as a guanine tetrad. The stacking of guanine tetrads results in G-quadruplex DNA structures. G-quadruplex DNA can form under physiological conditions from some G-rich sequences, such as those found in telomeres, immunoglobulin switch regions, gene promoters, fragile X repeats, and the dimerization domain in the human immunodeficiency virus (HIV) genome.
2006-02-09 Added TERM G-quadruplex DNA binding
2006-02-09 Added SYNONYM G-DNA binding
2006-02-09 Added SYNONYM G-quartet binding
2006-02-09 Added SYNONYM quadruplex DNA binding
2006-02-09 Added SYNONYM tetraplex DNA binding

Term

Timestamp Action Category Detail
2006-02-09 Added TERM G-quadruplex DNA binding

Definition/synonyms

Timestamp Action Category Detail
2009-10-27 Deleted SYNONYM G-quartet binding
2009-10-27 Added SYNONYM G quartet DNA binding
2009-10-27 Added SYNONYM G quartet binding
2009-10-27 Added SYNONYM G-quartet DNA binding
2009-10-27 Added SYNONYM G quadruplex DNA binding
2009-10-27 Added SYNONYM G-quartet binding
2009-07-03 Deleted DEFINITION Interacting selectively with G-quadruplex DNA structures, in which groups of four guanines adopt a flat, cyclic Hoogsteen hydrogen-bonding arrangement known as a guanine tetrad. The stacking of guanine tetrads results in G-quadruplex DNA structures. G-quadruplex DNA can form under physiological conditions from some G-rich sequences, such as those found in telomeres, immunoglobulin switch regions, gene promoters, fragile X repeats, and the dimerization domain in the human immunodeficiency virus (HIV) genome.
2009-07-03 Added DEFINITION Interacting selectively and non-covalently with G-quadruplex DNA structures, in which groups of four guanines adopt a flat, cyclic Hoogsteen hydrogen-bonding arrangement known as a guanine tetrad. The stacking of guanine tetrads results in G-quadruplex DNA structures. G-quadruplex DNA can form under physiological conditions from some G-rich sequences, such as those found in telomeres, immunoglobulin switch regions, gene promoters, fragile X repeats, and the dimerization domain in the human immunodeficiency virus (HIV) genome.
2008-05-13 Added DEFINITION Interacting selectively with G-quadruplex DNA structures, in which groups of four guanines adopt a flat, cyclic Hoogsteen hydrogen-bonding arrangement known as a guanine tetrad. The stacking of guanine tetrads results in G-quadruplex DNA structures. G-quadruplex DNA can form under physiological conditions from some G-rich sequences, such as those found in telomeres, immunoglobulin switch regions, gene promoters, fragile X repeats, and the dimerization domain in the human immunodeficiency virus (HIV) genome.
2008-05-12 Deleted DEFINITION Interacting selectively with G-quadruplex DNA structures, in which groups of four guanines adopt a flat, cyclic Hoogsteen hydrogen-bonding arrangement known as a guanine tetrad. The stacking of guanine tetrads results in G-quadruplex DNA structures. G-quadruplex DNA can form under physiological conditions from some G-rich sequences, such as those found in telomeres, immunoglobulin switch regions, gene promoters, fragile X repeats, and the dimerization domain in the human immunodeficiency virus (HIV) genome.
2007-08-09 Added SYNONYM G-DNA binding
2007-08-09 Added SYNONYM G-quartet binding
2007-08-09 Added SYNONYM quadruplex DNA binding
2007-08-09 Added SYNONYM tetraplex DNA binding
2007-08-09 Deleted SYNONYM G-DNA binding
2007-08-09 Deleted SYNONYM G-quartet binding
2007-08-09 Deleted SYNONYM quadruplex DNA binding
2007-08-09 Deleted SYNONYM tetraplex DNA binding
2006-02-10 Added DEFINITION Interacting selectively with G-quadruplex DNA structures, in which groups of four guanines adopt a flat, cyclic Hoogsteen hydrogen-bonding arrangement known as a guanine tetrad. The stacking of guanine tetrads results in G-quadruplex DNA structures. G-quadruplex DNA can form under physiological conditions from some G-rich sequences, such as those found in telomeres, immunoglobulin switch regions, gene promoters, fragile X repeats, and the dimerization domain in the human immunodeficiency virus (HIV) genome.
2006-02-09 Added SYNONYM G-DNA binding
2006-02-09 Added SYNONYM G-quartet binding
2006-02-09 Added SYNONYM quadruplex DNA binding
2006-02-09 Added SYNONYM tetraplex DNA binding

Relationships

Timestamp Action Category Detail
2008-04-01 Updated RELATION is a GO:0043566 (structure-specific DNA binding)
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