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GO:0046876 3,4-didehydroretinal binding

Term Information

ID GO:0046876
Name 3,4-didehydroretinal binding
Ontology Molecular Function
Definition Interacting selectively and non-covalently with 3,4-didehydroretinal, a form of retinal that plays a role in the visual process in freshwater fish and some amphibians analogous to that of all-trans retinal in other vertebrates. 3,4-didehydro-11-cis-retinal combines with an opsin to form cyanopsin (cone) or porphyropsin (rod).
GONUTS GO:0046876 Wiki Page

Synonyms

Synonyms are alternative words or phrases closely related in meaning to the term name, with indication of the relationship between the name and synonym given by the synonym scope. Click on the icon for more details.
Type Synonym
narrow red-sensitive opsin
narrow UV-sensitive opsin
narrow blue-sensitive opsin
narrow green-sensitive opsin
narrow long-wave-sensitive opsin
narrow violet-sensitive opsin
narrow short-wave-sensitive opsin
narrow opsin

Annotation Guidance

Usage of this term is subject to the following annotation guidelines:
Annotation Guidelines
Binding term considerationsLink

Taxon Constraints

The use of this term should conform to the following taxon constraints:
Ancestor GO ID Ancestor GO Term Name Relationship Taxon ID Taxon Reference(s)
GO:0005501 retinoid binding only_in_taxon 33208 Metazoa
More information on taxon constraints in GO is available here

Cross-Ontology Relations

Relation Other Ontology ID Term
has_input CHEBI CHEBI:28537 all-trans-dehydroretinal

Replaces

This term can be used instead of these obsolete terms:
GO Identifier GO Term Name Reason
GO:0015053 obsolete opsin CONSIDER GO:0046876
GO:0015059 obsolete blue-sensitive opsin CONSIDER GO:0046876
GO:0015060 obsolete green-sensitive opsin CONSIDER GO:0046876
GO:0015061 obsolete red-sensitive opsin CONSIDER GO:0046876
GO:0015062 obsolete violet-sensitive opsin CONSIDER GO:0046876
GO:0015063 obsolete long-wave-sensitive opsin CONSIDER GO:0046876
GO:0015064 obsolete UV-sensitive opsin CONSIDER GO:0046876
GO:0016016 obsolete short-wave-sensitive opsin CONSIDER GO:0046876

Ancestor Chart

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Child Terms

This table lists all terms that are direct descendants (child terms) of GO:0046876:
Term has no children

Protein Annotation

Displaying annotations FIRST to LAST of TOTAL Page size: Additional filters: Bookmarkable link
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Gene Product ID
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Qualifier
GO Identifier
GO Term Name
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Original GO ID
Original GO Term Name
Evidence
Reference
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Name
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Type
Taxon Name
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Co-occurring Terms

These tables show the number of times the term listed in the table has been co-annotated with GO:0046876. The terms are listed in descending order of number of times the term has been co-annotated.
The table on the left is calculated using both electronic and manual-evidenced annotations, while the table on the right is calculated using only manual-evidenced annotations.
Co-occurrence statistics for GO:0046876 based on the entire annotation set Co-occurrence statistics for GO:0046876 based on non-IEA annotations only

Change Log

All changes

Timestamp Action Category Detail
2009-07-03 Added DEFINITION Interacting selectively and non-covalently with 3,4-didehydroretinal, a form of retinal that plays a role in the visual process in freshwater fish and some amphibians analogous to that of all-trans retinal in other vertebrates. 3,4-didehydro-11-cis-retinal combines with an opsin to form cyanopsin (cone) or porphyropsin (rod).
2009-07-03 Deleted DEFINITION Interacting selectively with 3,4-didehydroretinal, a form of retinal that plays a role in the visual process in freshwater fish and some amphibians analogous to that of all-trans retinal in other vertebrates. 3,4-didehydro-11-cis-retinal combines with an opsin to form cyanopsin (cone) or porphyropsin (rod).
2008-05-13 Added DEFINITION Interacting selectively with 3,4-didehydroretinal, a form of retinal that plays a role in the visual process in freshwater fish and some amphibians analogous to that of all-trans retinal in other vertebrates. 3,4-didehydro-11-cis-retinal combines with an opsin to form cyanopsin (cone) or porphyropsin (rod).
2008-05-12 Deleted DEFINITION Interacting selectively with 3,4-didehydroretinal, a form of retinal that plays a role in the visual process in freshwater fish and some amphibians analogous to that of all-trans retinal in other vertebrates. 3,4-didehydro-11-cis-retinal combines with an opsin to form cyanopsin (cone) or porphyropsin (rod).
2008-04-01 Updated RELATION is a GO:0005501 (retinoid binding)
2007-08-09 Added SYNONYM UV-sensitive opsin
2007-08-09 Added SYNONYM blue-sensitive opsin
2007-08-09 Added SYNONYM green-sensitive opsin
2007-08-09 Added SYNONYM long-wave-sensitive opsin
2007-08-09 Added SYNONYM opsin
2007-08-09 Added SYNONYM red-sensitive opsin
2007-08-09 Added SYNONYM short-wave-sensitive opsin
2007-08-09 Added SYNONYM violet-sensitive opsin
2007-08-09 Deleted SYNONYM UV-sensitive opsin
2007-08-09 Deleted SYNONYM blue-sensitive opsin
2007-08-09 Deleted SYNONYM green-sensitive opsin
2007-08-09 Deleted SYNONYM long-wave-sensitive opsin
2007-08-09 Deleted SYNONYM opsin
2007-08-09 Deleted SYNONYM red-sensitive opsin
2007-08-09 Deleted SYNONYM short-wave-sensitive opsin
2007-08-09 Deleted SYNONYM violet-sensitive opsin
2005-08-10 Added SYNONYM UV-sensitive opsin
2005-08-10 Added SYNONYM blue-sensitive opsin
2005-08-10 Added SYNONYM green-sensitive opsin
2005-08-10 Added SYNONYM long-wave-sensitive opsin
2005-08-10 Added SYNONYM opsin
2005-08-10 Added SYNONYM red-sensitive opsin
2005-08-10 Added SYNONYM short-wave-sensitive opsin
2005-08-10 Added SYNONYM violet-sensitive opsin
2003-06-10 Updated TERM 3,4-didehydroretinal binding
2003-03-26 Added DEFINITION Interacting selectively with 3,4-didehydroretinal, a form of retinal that plays a role in the visual process in freshwater fish and some amphibians analogous to that of all-trans retinal in other vertebrates. 3,4-didehydro-11-cis-retinal combines with an opsin to form cyanopsin (cone) or porphyropsin (rod).
2003-03-19 Added TERM 3,4-didehydroretinal binding activity

Term

Timestamp Action Category Detail
2003-06-10 Updated TERM 3,4-didehydroretinal binding
2003-03-19 Added TERM 3,4-didehydroretinal binding activity

Definition/synonyms

Timestamp Action Category Detail
2009-07-03 Added DEFINITION Interacting selectively and non-covalently with 3,4-didehydroretinal, a form of retinal that plays a role in the visual process in freshwater fish and some amphibians analogous to that of all-trans retinal in other vertebrates. 3,4-didehydro-11-cis-retinal combines with an opsin to form cyanopsin (cone) or porphyropsin (rod).
2009-07-03 Deleted DEFINITION Interacting selectively with 3,4-didehydroretinal, a form of retinal that plays a role in the visual process in freshwater fish and some amphibians analogous to that of all-trans retinal in other vertebrates. 3,4-didehydro-11-cis-retinal combines with an opsin to form cyanopsin (cone) or porphyropsin (rod).
2008-05-13 Added DEFINITION Interacting selectively with 3,4-didehydroretinal, a form of retinal that plays a role in the visual process in freshwater fish and some amphibians analogous to that of all-trans retinal in other vertebrates. 3,4-didehydro-11-cis-retinal combines with an opsin to form cyanopsin (cone) or porphyropsin (rod).
2008-05-12 Deleted DEFINITION Interacting selectively with 3,4-didehydroretinal, a form of retinal that plays a role in the visual process in freshwater fish and some amphibians analogous to that of all-trans retinal in other vertebrates. 3,4-didehydro-11-cis-retinal combines with an opsin to form cyanopsin (cone) or porphyropsin (rod).
2007-08-09 Added SYNONYM UV-sensitive opsin
2007-08-09 Added SYNONYM blue-sensitive opsin
2007-08-09 Added SYNONYM green-sensitive opsin
2007-08-09 Added SYNONYM long-wave-sensitive opsin
2007-08-09 Added SYNONYM opsin
2007-08-09 Added SYNONYM red-sensitive opsin
2007-08-09 Added SYNONYM short-wave-sensitive opsin
2007-08-09 Added SYNONYM violet-sensitive opsin
2007-08-09 Deleted SYNONYM UV-sensitive opsin
2007-08-09 Deleted SYNONYM blue-sensitive opsin
2007-08-09 Deleted SYNONYM green-sensitive opsin
2007-08-09 Deleted SYNONYM long-wave-sensitive opsin
2007-08-09 Deleted SYNONYM opsin
2007-08-09 Deleted SYNONYM red-sensitive opsin
2007-08-09 Deleted SYNONYM short-wave-sensitive opsin
2007-08-09 Deleted SYNONYM violet-sensitive opsin
2005-08-10 Added SYNONYM UV-sensitive opsin
2005-08-10 Added SYNONYM blue-sensitive opsin
2005-08-10 Added SYNONYM green-sensitive opsin
2005-08-10 Added SYNONYM long-wave-sensitive opsin
2005-08-10 Added SYNONYM opsin
2005-08-10 Added SYNONYM red-sensitive opsin
2005-08-10 Added SYNONYM short-wave-sensitive opsin
2005-08-10 Added SYNONYM violet-sensitive opsin
2003-03-26 Added DEFINITION Interacting selectively with 3,4-didehydroretinal, a form of retinal that plays a role in the visual process in freshwater fish and some amphibians analogous to that of all-trans retinal in other vertebrates. 3,4-didehydro-11-cis-retinal combines with an opsin to form cyanopsin (cone) or porphyropsin (rod).

Relationships

Timestamp Action Category Detail
2008-04-01 Updated RELATION is a GO:0005501 (retinoid binding)
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