spacer

GO:0039692 single stranded viral RNA replication via double stranded DNA intermediate

Term Information

ID GO:0039692
Name single stranded viral RNA replication via double stranded DNA intermediate
Ontology Biological Process
Definition A viral genome replication where the template is single-stranded RNA (ssRNA), and which proceeds via a double stranded DNA (dsDNA) intermediate molecule. Viral genomic RNA is first reverse transcribed into dsDNA, which integrates into the host chromosomal DNA, where it is transcribed by host RNA polymerase II.
Secondary IDs GO:0045090
GONUTS GO:0039692 Wiki Page

Synonyms

Synonyms are alternative words or phrases closely related in meaning to the term name, with indication of the relationship between the name and synonym given by the synonym scope. Click on the icon for more details.
Type Synonym
exact retroviral genome replication
related viral ssRNA replication via dsDNA intermediate

Annotation Guidance

Usage of this term is subject to the following annotation guidelines:
Annotation Guidelines
Annotating gene products that interact with other organisms Link

GO Discussions

The GO editorial group is intending to improve the information provided in this area of the GO.
If you would like to be involved in discussions regarding this development activity, please email the GO Consortium.
Please note that it is still appropriate to use this term for curation or analysis purposes.
Ontology Development Project
Viral ProcessesLink

Cross-references

Database ID
VZ 1937

Ancestor Chart

This chart is interactive; you can click on the term boxes and legend for more information.
Display options
Display
Key
GO IDs
Term box width
Term box height
Slim colours
Show children
Image size limit (in megapixels)
Note that setting the limit too high may result in images being generated slowly; it may even cause the browser to crash. The maximum limit is 20 megapixels.

Child Terms

This table lists all terms that are direct descendants (child terms) of GO:0039692:
Relationship To GO:0039692 Child Term Child Term Name
Has part GO:0001171 reverse transcription
Has part GO:0039695 DNA-templated viral transcription
Regulates GO:0045091 regulation of single stranded viral RNA replication via double stranded DNA intermediate
Negatively regulates GO:0045869 negative regulation of single stranded viral RNA replication via double stranded DNA intermediate
Positively regulates GO:0045870 positive regulation of single stranded viral RNA replication via double stranded DNA intermediate
Has part GO:0044826 viral genome integration into host DNA

Protein Annotation

Displaying annotations FIRST to LAST of TOTAL Page size: Additional filters: Bookmarkable link
Database
Gene Product ID
Symbol
Qualifier
GO Identifier
GO Term Name
Aspect
Original GO ID
Original GO Term Name
Evidence
Reference
With
Taxon
Date
Assigned By
Product Form ID
Name
Synonym
Type
Taxon Name
Sequence

Export

Display options

ID Mapping

QuickGO maps between different identifier types by using a combination of mapping files provided by the databases, and using identifier cross-references supplied by UniProtKB.

If more than one identifier type needs to be used to map all required sequences, drag the selected databases to change the order in which identifiers are found.

Filter

Select

Grouped by
Annotation count
Protein count
Both

Co-occurring Terms

These tables show the number of times the term listed in the table has been co-annotated with GO:0039692. The terms are listed in descending order of number of times the term has been co-annotated.
The table on the left is calculated using both electronic and manual-evidenced annotations, while the table on the right is calculated using only manual-evidenced annotations.
Co-occurrence statistics for GO:0039692 based on the entire annotation set Co-occurrence statistics for GO:0039692 based on non-IEA annotations only

Change Log

All changes

Timestamp Action Category Detail
2014-05-25 Added RELATION is a GO:0006259 (DNA metabolic process)
2013-10-30 Added SECONDARY GO:0045090 (retroviral genome replication)
2013-10-30 Added SYNONYM retroviral genome replication
2013-10-25 Added RELATION is a GO:0039694 (viral RNA genome replication)
2013-10-25 Deleted RELATION is a GO:0019079 (viral genome replication)
2013-10-23 Added RELATION is a GO:0019079 (viral genome replication)
2013-10-23 Added XREF VZ:1937
2013-10-23 Added SYNONYM viral ssRNA replication via dsDNA intermediate
2013-10-23 Added DEFINITION A viral genome replication where the template is single-stranded RNA (ssRNA), and which proceeds via a double stranded DNA (dsDNA) intermediate molecule. Viral genomic RNA is first reverse transcribed into dsDNA, which integrates into the host chromosomal DNA, where it is transcribed by host RNA polymerase II.
2013-10-23 Added TERM single stranded viral RNA replication via double stranded DNA intermediate

Term

Timestamp Action Category Detail
2013-10-23 Added TERM single stranded viral RNA replication via double stranded DNA intermediate

Definition/synonyms

Timestamp Action Category Detail
2013-10-30 Added SYNONYM retroviral genome replication
2013-10-23 Added SYNONYM viral ssRNA replication via dsDNA intermediate
2013-10-23 Added DEFINITION A viral genome replication where the template is single-stranded RNA (ssRNA), and which proceeds via a double stranded DNA (dsDNA) intermediate molecule. Viral genomic RNA is first reverse transcribed into dsDNA, which integrates into the host chromosomal DNA, where it is transcribed by host RNA polymerase II.

Relationships

Timestamp Action Category Detail
2014-05-25 Added RELATION is a GO:0006259 (DNA metabolic process)
2013-10-25 Added RELATION is a GO:0039694 (viral RNA genome replication)
2013-10-25 Deleted RELATION is a GO:0019079 (viral genome replication)
2013-10-23 Added RELATION is a GO:0019079 (viral genome replication)

Cross-references

Timestamp Action Category Detail
2013-10-23 Added XREF VZ:1937

Other

Timestamp Action Category Detail
2013-10-30 Added SECONDARY GO:0045090 (retroviral genome replication)
spacer
Please send comments, suggestions or bug reports to goa@ebi.ac.uk. Click here for details of how to cite UniProt-GOA and QuickGO.
13ms