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GO:0042597 periplasmic space

Term Information

ID GO:0042597
Name periplasmic space
Ontology Cellular Component
Definition The region between the inner (cytoplasmic) and outer membrane (Gram-negative Bacteria) or cytoplasmic membrane and cell wall (Fungi and Gram-positive Bacteria).
Secondary IDs GO:0005620
GONUTS GO:0042597 Wiki Page

Synonyms

Synonyms are alternative words or phrases closely related in meaning to the term name, with indication of the relationship between the name and synonym given by the synonym scope. Click on the icon for more details.
Type Synonym
exact periplasm

Taxon Constraints

The use of this term should conform to the following taxon constraints:
Taxon Rule Ancestor GO ID Ancestor GO Term Name Relationship Taxon ID Taxon Reference(s)
GOTAX:0000057 GO:0005623 cell only_in_taxon 131567 cellular organisms
More information on taxon constraints in GO is available here

GO Slims

This term is present in the following GO Consortium-maintained GO slims:
GO slim nameCount of all terms
goslim_metagenomics119
goslim_pir462

Cross-references

Database ID
InterPro IPR001188
InterPro IPR003321
InterPro IPR006376
InterPro IPR007195
InterPro IPR007348
InterPro IPR007444
InterPro IPR008397
InterPro IPR008939
InterPro IPR008953
InterPro IPR009153
InterPro IPR009155
InterPro IPR009435
InterPro IPR009451
InterPro IPR010051
InterPro IPR010068
InterPro IPR010702
InterPro IPR010794
InterPro IPR011795
InterPro IPR011887
InterPro IPR012127
InterPro IPR012289
InterPro IPR012899
InterPro IPR013476
InterPro IPR013504
InterPro IPR014139
InterPro IPR014167
InterPro IPR014340
InterPro IPR014453
InterPro IPR014635
InterPro IPR016026
InterPro IPR017564
InterPro IPR017570
InterPro IPR017783
InterPro IPR017838
InterPro IPR017839
InterPro IPR018323
InterPro IPR020365
InterPro IPR022455
InterPro IPR022859
InterPro IPR023544
InterPro IPR023720
InterPro IPR024167
UniProtKB-KW Periplasm
UniProtKB-SubCell Periplasm

Ancestor Chart

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Child Terms

This table lists all terms that are direct descendants (child terms) of GO:0042597:
Relationship To GO:0042597 Child Term Child Term Name
Part of GO:0055040 periplasmic flagellum
Is a GO:0030287 cell wall-bounded periplasmic space
Is a GO:0030288 outer membrane-bounded periplasmic space
Is a GO:0036240 septal periplasm

Protein Annotation

Displaying annotations FIRST to LAST of TOTAL Page size: Additional filters: Bookmarkable link
Database
Gene Product ID
Symbol
Qualifier
GO Identifier
GO Term Name
Aspect
Original GO ID
Original GO Term Name
Evidence
Reference
With
Taxon
Date
Assigned By
Product Form ID
Name
Synonym
Type
Taxon Name
Sequence

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Co-occurring Terms

These tables show the number of times the term listed in the table has been co-annotated with GO:0042597. The terms are listed in descending order of number of times the term has been co-annotated.
The table on the left is calculated using both electronic and manual-evidenced annotations, while the table on the right is calculated using only manual-evidenced annotations.
Co-occurrence statistics for GO:0042597 based on the entire annotation set Co-occurrence statistics for GO:0042597 based on non-IEA annotations only

Change Log

All changes

Timestamp Action Category Detail
2013-09-07 Deleted DEFINITION The region between the inner (cytoplasmic) and outer membrane (Gram-negative Bacteria) or inner membrane and cell wall (Fungi and Gram-positive Bacteria).
2013-09-07 Added DEFINITION The region between the inner (cytoplasmic) and outer membrane (Gram-negative Bacteria) or cytoplasmic membrane and cell wall (Fungi and Gram-positive Bacteria).
2013-08-17 Added DEFINITION The region between the inner (cytoplasmic) and outer membrane (Gram-negative Bacteria) or inner membrane and cell wall (Fungi and Gram-positive Bacteria).
2013-08-17 Deleted DEFINITION The region between the inner (cytoplasmic) and outer membrane (Gram-negative Bacteria) or inner membrane and cell wall (Fungi).
2013-04-18 Updated SLIM goslim_pir
2013-04-18 Updated SLIM goslim_metagenomics
2012-02-17 Added SLIM goslim_metagenomics
2008-06-09 Added SLIM goslim_pir
2008-05-13 Added DEFINITION The region between the inner (cytoplasmic) and outer membrane (Gram-negative Bacteria) or inner membrane and cell wall (Fungi).
2008-05-12 Deleted DEFINITION The region between the inner (cytoplasmic) and outer membrane (Gram-negative Bacteria) or inner membrane and cell wall (Fungi).
2008-04-01 Updated RELATION is a GO:0044464 (cell part)
2007-08-09 Added SYNONYM periplasm
2007-08-09 Deleted SYNONYM periplasm
2007-01-23 Updated DEFINITION The region between the inner (cytoplasmic) and outer membrane (Gram-negative Bacteria) or inner membrane and cell wall (Fungi).
2007-01-15 Added SECONDARY GO:0005620 (periplasmic space)
2007-01-09 Updated DEFINITION The region between the inner (cytoplasmic) and outer membrane (Gram-negative Bacteria research community) or inner membrane and cell wall (Fungi research community).
2006-02-16 Updated DEFINITION The region between the inner (cytoplasmic) and outer membrane (Gram-negative bacteria) or inner membrane and cell wall (fungi).
2006-02-11 Updated DEFINITION The region between the inner (cytoplasmic) and outer membrane (Gram negative bacteria) or inner membrane and cell wall (fungi).
2004-04-19 Added SYNONYM periplasm
2004-04-16 Deleted SYNONYM periplasm
2003-03-26 Added DEFINITION The region between the inner (cytoplasmic) and outer membrane (Gram-negative bacteria) or inner membrane and cell wall (fungi).
2003-03-05 Added TERM periplasmic space
2003-03-05 Added SYNONYM periplasm

Term

Timestamp Action Category Detail
2003-03-05 Added TERM periplasmic space

Definition/synonyms

Timestamp Action Category Detail
2013-09-07 Deleted DEFINITION The region between the inner (cytoplasmic) and outer membrane (Gram-negative Bacteria) or inner membrane and cell wall (Fungi and Gram-positive Bacteria).
2013-09-07 Added DEFINITION The region between the inner (cytoplasmic) and outer membrane (Gram-negative Bacteria) or cytoplasmic membrane and cell wall (Fungi and Gram-positive Bacteria).
2013-08-17 Added DEFINITION The region between the inner (cytoplasmic) and outer membrane (Gram-negative Bacteria) or inner membrane and cell wall (Fungi and Gram-positive Bacteria).
2013-08-17 Deleted DEFINITION The region between the inner (cytoplasmic) and outer membrane (Gram-negative Bacteria) or inner membrane and cell wall (Fungi).
2008-05-13 Added DEFINITION The region between the inner (cytoplasmic) and outer membrane (Gram-negative Bacteria) or inner membrane and cell wall (Fungi).
2008-05-12 Deleted DEFINITION The region between the inner (cytoplasmic) and outer membrane (Gram-negative Bacteria) or inner membrane and cell wall (Fungi).
2007-08-09 Added SYNONYM periplasm
2007-08-09 Deleted SYNONYM periplasm
2007-01-23 Updated DEFINITION The region between the inner (cytoplasmic) and outer membrane (Gram-negative Bacteria) or inner membrane and cell wall (Fungi).
2007-01-09 Updated DEFINITION The region between the inner (cytoplasmic) and outer membrane (Gram-negative Bacteria research community) or inner membrane and cell wall (Fungi research community).
2006-02-16 Updated DEFINITION The region between the inner (cytoplasmic) and outer membrane (Gram-negative bacteria) or inner membrane and cell wall (fungi).
2006-02-11 Updated DEFINITION The region between the inner (cytoplasmic) and outer membrane (Gram negative bacteria) or inner membrane and cell wall (fungi).
2004-04-19 Added SYNONYM periplasm
2004-04-16 Deleted SYNONYM periplasm
2003-03-26 Added DEFINITION The region between the inner (cytoplasmic) and outer membrane (Gram-negative bacteria) or inner membrane and cell wall (fungi).
2003-03-05 Added SYNONYM periplasm

Relationships

Timestamp Action Category Detail
2008-04-01 Updated RELATION is a GO:0044464 (cell part)

Other

Timestamp Action Category Detail
2013-04-18 Updated SLIM goslim_pir
2013-04-18 Updated SLIM goslim_metagenomics
2012-02-17 Added SLIM goslim_metagenomics
2008-06-09 Added SLIM goslim_pir
2007-01-15 Added SECONDARY GO:0005620 (periplasmic space)
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