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GO:0006366 transcription from RNA polymerase II promoter

Term Information

ID GO:0006366
Name transcription from RNA polymerase II promoter
Ontology Biological Process
Definition The synthesis of RNA from a DNA template by RNA polymerase II, originating at an RNA polymerase II promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs).
Secondary IDs GO:0032568 GO:0032569
GONUTS GO:0006366 Wiki Page

Synonyms

Synonyms are alternative words or phrases closely related in meaning to the term name, with indication of the relationship between the name and synonym given by the synonym scope. Click on the icon for more details.
Type Synonym
related RNA polymerase II transcription factor activity
related specific transcription from RNA polymerase II promoter
related general transcription from RNA polymerase II promoter
related gene-specific transcription from RNA polymerase II promoter
exact transcription from Pol II promoter

Annotation Guidance

Usage of this term is subject to the following annotation guidelines:
Annotation Guidelines
Annotating to transcription processesLink

GO Slims

This term is present in the following GO Consortium-maintained GO slims:
GO slim nameCount of all terms
goslim_yeast169

Cross-references

Database ID
InterPro IPR000684
InterPro IPR003195
InterPro IPR016640
InterPro IPR016743
InterPro IPR027755
InterPro IPR027756
InterPro IPR029138
InterPro IPR029818

Replaces

This term can be used instead of these obsolete terms:
GO Identifier GO Term Name Reason
GO:0003702 RNA polymerase II transcription factor activity CONSIDER GO:0006366
GO:0003704 specific RNA polymerase II transcription factor activity CONSIDER GO:0006366
GO:0016251 general RNA polymerase II transcription factor activity CONSIDER GO:0006366
GO:0016252 nonspecific RNA polymerase II transcription factor activity CONSIDER GO:0006366

Ancestor Chart

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Child Terms

This table lists all terms that are direct descendants (child terms) of GO:0006366:
Relationship To GO:0006366 Child Term Child Term Name
Part of GO:0001111 promoter clearance from RNA polymerase II promoter
Regulates GO:0006357 regulation of transcription from RNA polymerase II promoter
Is a GO:0042789 mRNA transcription from RNA polymerase II promoter
Is a GO:0042795 snRNA transcription from RNA polymerase II promoter
Part of GO:0006367 transcription initiation from RNA polymerase II promoter
Part of GO:0006368 transcription elongation from RNA polymerase II promoter
Part of GO:0006369 termination of RNA polymerase II transcription
Part of GO:0000981 sequence-specific DNA binding RNA polymerase II transcription factor activity
Part of GO:0000991 core RNA polymerase II binding transcription factor activity
Part of GO:0001076 RNA polymerase II transcription factor binding transcription factor activity
Part of GO:0001055 RNA polymerase II activity
Negatively regulates GO:0000122 negative regulation of transcription from RNA polymerase II promoter
Positively regulates GO:0045944 positive regulation of transcription from RNA polymerase II promoter
Is a GO:0001015 snoRNA transcription from an RNA polymerase II promoter
Is a GO:0061614 pri-miRNA transcription from RNA polymerase II promoter
Is a GO:0097394 telomeric RNA transcription from RNA pol II promoter

Protein Annotation

Displaying annotations FIRST to LAST of TOTAL Page size: Additional filters: Bookmarkable link
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GO Identifier
GO Term Name
Aspect
Original GO ID
Original GO Term Name
Evidence
Reference
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Taxon
Date
Assigned By
Product Form ID
Name
Synonym
Type
Taxon Name
Sequence

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Co-occurring Terms

These tables show the number of times the term listed in the table has been co-annotated with GO:0006366. The terms are listed in descending order of number of times the term has been co-annotated.
The table on the left is calculated using both electronic and manual-evidenced annotations, while the table on the right is calculated using only manual-evidenced annotations.
Co-occurrence statistics for GO:0006366 based on the entire annotation set Co-occurrence statistics for GO:0006366 based on non-IEA annotations only

Change Log

All changes

Timestamp Action Category Detail
2013-04-18 Updated SLIM goslim_yeast
2011-11-24 Deleted SLIM goslim_pombe
2011-11-17 Added SYNONYM RNA polymerase II transcription factor activity
2011-10-02 Added SLIM goslim_pombe
2011-08-14 Added SLIM goslim_yeast
2011-05-15 Added SYNONYM specific transcription from RNA polymerase II promoter
2011-05-15 Added SYNONYM general transcription from RNA polymerase II promoter
2011-05-15 Added SYNONYM gene-specific transcription from RNA polymerase II promoter
2011-05-15 Added SECONDARY GO:0032569 (gene-specific transcription from RNA polymerase II promoter)
2011-05-15 Added SECONDARY GO:0032568 (general transcription from RNA polymerase II promoter)
2011-05-12 Deleted DEFINITION The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs).
2011-05-12 Added DEFINITION The synthesis of RNA from a DNA template by RNA polymerase II, originating at an RNA polymerase II promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs).
2008-05-13 Added DEFINITION The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs).
2008-05-12 Deleted DEFINITION The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs).
2008-04-01 Updated RELATION is a GO:0006351 (transcription, DNA-templated)
2007-08-09 Added SYNONYM transcription from Pol II promoter
2007-08-09 Deleted SYNONYM transcription from Pol II promoter
2005-03-27 Updated TERM transcription from RNA polymerase II promoter
2005-03-27 Added SYNONYM transcription from Pol II promoter
2005-03-19 Updated DEFINITION The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs).
2003-06-17 Added DEFINITION The synthesis of RNA from a DNA template by RNA Polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs).
2002-07-16 Updated TERM transcription from Pol II promoter
2002-02-06 Updated TERM transcription, from Pol II promoter
2001-10-04 Updated TERM transcription, from Pol II promoter
2001-04-03 Updated TERM transcription from Pol II promoter
2001-03-30 Added TERM transcription from Pol II promoter

Term

Timestamp Action Category Detail
2005-03-27 Updated TERM transcription from RNA polymerase II promoter
2002-07-16 Updated TERM transcription from Pol II promoter
2002-02-06 Updated TERM transcription, from Pol II promoter
2001-10-04 Updated TERM transcription, from Pol II promoter
2001-04-03 Updated TERM transcription from Pol II promoter
2001-03-30 Added TERM transcription from Pol II promoter

Definition/synonyms

Timestamp Action Category Detail
2011-11-17 Added SYNONYM RNA polymerase II transcription factor activity
2011-05-15 Added SYNONYM specific transcription from RNA polymerase II promoter
2011-05-15 Added SYNONYM general transcription from RNA polymerase II promoter
2011-05-15 Added SYNONYM gene-specific transcription from RNA polymerase II promoter
2011-05-12 Deleted DEFINITION The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs).
2011-05-12 Added DEFINITION The synthesis of RNA from a DNA template by RNA polymerase II, originating at an RNA polymerase II promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs).
2008-05-13 Added DEFINITION The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs).
2008-05-12 Deleted DEFINITION The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs).
2007-08-09 Added SYNONYM transcription from Pol II promoter
2007-08-09 Deleted SYNONYM transcription from Pol II promoter
2005-03-27 Added SYNONYM transcription from Pol II promoter
2005-03-19 Updated DEFINITION The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs).
2003-06-17 Added DEFINITION The synthesis of RNA from a DNA template by RNA Polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs).

Relationships

Timestamp Action Category Detail
2008-04-01 Updated RELATION is a GO:0006351 (transcription, DNA-templated)

Other

Timestamp Action Category Detail
2013-04-18 Updated SLIM goslim_yeast
2011-11-24 Deleted SLIM goslim_pombe
2011-10-02 Added SLIM goslim_pombe
2011-08-14 Added SLIM goslim_yeast
2011-05-15 Added SECONDARY GO:0032569 (gene-specific transcription from RNA polymerase II promoter)
2011-05-15 Added SECONDARY GO:0032568 (general transcription from RNA polymerase II promoter)
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