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GO:0031591 wybutosine biosynthetic process

Term Information

ID GO:0031591
Name wybutosine biosynthetic process
Ontology Biological Process
Definition The chemical reactions and pathways resulting in the formation of wybutosine, 3H-imidazo[1,2-alpha]purine-7-butanoic acid, 4,9-dihydro- alpha-[(methoxycarbonyl)amino]- 4,6-dimethyl-9-oxo- 3-beta-D-ribofuranosyl methyl ester, a modified nucleoside found in some tRNA molecules.
Comment Note that wybutosine is a hypermodified G-residue, formerly called the Y-base, and its derivatives are exclusively found at position 37 (anticodon loop) of tRNAPhe.
GONUTS GO:0031591 Wiki Page

Synonyms

Synonyms are alternative words or phrases closely related in meaning to the term name, with indication of the relationship between the name and synonym given by the synonym scope. Click on the icon for more details.
Type Synonym
exact yW biosynthetic process
exact yW biosynthesis

Cross-Ontology Relations

Relation Other Ontology ID Term
has_output CHEBI CHEBI:46574 wybutosine

Cross-references

Database ID
InterPro IPR022908
InterPro IPR026274
InterPro IPR029612

Ancestor Chart

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Child Terms

This table lists all terms that are direct descendants (child terms) of GO:0031591:
Term has no children

Protein Annotation

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Co-occurring Terms

These tables show the number of times the term listed in the table has been co-annotated with GO:0031591. The terms are listed in descending order of number of times the term has been co-annotated.
The table on the left is calculated using both electronic and manual-evidenced annotations, while the table on the right is calculated using only manual-evidenced annotations.
Co-occurrence statistics for GO:0031591 based on the entire annotation set Co-occurrence statistics for GO:0031591 based on non-IEA annotations only

Change Log

All changes

Timestamp Action Category Detail
2015-06-25 Deleted RELATION is a GO:1901137 (carbohydrate derivative biosynthetic process)
2013-11-28 Added RELATION is a GO:0044763 (single-organism cellular process)
2013-07-04 Added RELATION is a GO:1901659 (glycosyl compound biosynthetic process)
2013-07-04 Added RELATION is a GO:1901566 (organonitrogen compound biosynthetic process)
2013-07-04 Added RELATION is a GO:1901137 (carbohydrate derivative biosynthetic process)
2013-07-04 Added RELATION is a GO:0031590 (wybutosine metabolic process)
2013-07-04 Deleted RELATION is a GO:1901576 (organic substance biosynthetic process)
2013-06-29 Deleted RELATION is a GO:0031590 (wybutosine metabolic process)
2013-06-29 Added RELATION is a GO:1901576 (organic substance biosynthetic process)
2013-06-29 Deleted RELATION is a GO:0046114 (guanosine biosynthetic process)
2012-11-02 Added RELATION is a GO:0046114 (guanosine biosynthetic process)
2008-05-13 Added DEFINITION The chemical reactions and pathways resulting in the formation of wybutosine, 3H-imidazo[1,2-alpha]purine-7-butanoic acid, 4,9-dihydro- alpha-[(methoxycarbonyl)amino]- 4,6-dimethyl-9-oxo- 3-beta-D-ribofuranosyl methyl ester, a modified nucleoside found in some tRNA molecules.
2008-05-12 Deleted DEFINITION The chemical reactions and pathways resulting in the formation of wybutosine, 3H-imidazo[1,2-alpha]purine-7-butanoic acid, 4,9-dihydro- alpha-[(methoxycarbonyl)amino]- 4,6-dimethyl-9-oxo- 3-beta-D-ribofuranosyl methyl ester, a modified nucleoside found in some tRNA molecules.
2008-04-01 Updated RELATION is a GO:0031590 (wybutosine metabolic process)
2008-04-01 Updated RELATION is a GO:0006400 (tRNA modification)
2007-08-09 Added SYNONYM yW biosynthesis
2007-08-09 Added SYNONYM yW biosynthetic process
2007-08-09 Deleted SYNONYM yW biosynthetic process
2007-08-09 Deleted SYNONYM yW biosynthesis
2007-01-15 Updated TERM wybutosine biosynthetic process
2007-01-15 Added SYNONYM yW biosynthetic process
2006-05-04 Updated DEFINITION The chemical reactions and pathways resulting in the formation of wybutosine, 3H-imidazo[1,2-alpha]purine-7-butanoic acid, 4,9-dihydro- alpha-[(methoxycarbonyl)amino]- 4,6-dimethyl-9-oxo- 3-beta-D-ribofuranosyl methyl ester, a modified nucleoside found in some tRNA molecules.
2005-09-29 Added DEFINITION The formation from simpler components of wybutosine, 3H-imidazo[1,2-alpha]purine-7-butanoic acid, 4,9-dihydro- alpha-[(methoxycarbonyl)amino]- 4,6-dimethyl-9-oxo- 3-beta-D-ribofuranosyl methyl ester, a modified nucleoside found in some tRNA molecules.
2005-09-28 Added SYNONYM yW biosynthesis
2005-09-28 Added TERM wybutosine biosynthesis

Term

Timestamp Action Category Detail
2007-01-15 Updated TERM wybutosine biosynthetic process
2005-09-28 Added TERM wybutosine biosynthesis

Definition/synonyms

Timestamp Action Category Detail
2008-05-13 Added DEFINITION The chemical reactions and pathways resulting in the formation of wybutosine, 3H-imidazo[1,2-alpha]purine-7-butanoic acid, 4,9-dihydro- alpha-[(methoxycarbonyl)amino]- 4,6-dimethyl-9-oxo- 3-beta-D-ribofuranosyl methyl ester, a modified nucleoside found in some tRNA molecules.
2008-05-12 Deleted DEFINITION The chemical reactions and pathways resulting in the formation of wybutosine, 3H-imidazo[1,2-alpha]purine-7-butanoic acid, 4,9-dihydro- alpha-[(methoxycarbonyl)amino]- 4,6-dimethyl-9-oxo- 3-beta-D-ribofuranosyl methyl ester, a modified nucleoside found in some tRNA molecules.
2007-08-09 Added SYNONYM yW biosynthesis
2007-08-09 Added SYNONYM yW biosynthetic process
2007-08-09 Deleted SYNONYM yW biosynthetic process
2007-08-09 Deleted SYNONYM yW biosynthesis
2007-01-15 Added SYNONYM yW biosynthetic process
2006-05-04 Updated DEFINITION The chemical reactions and pathways resulting in the formation of wybutosine, 3H-imidazo[1,2-alpha]purine-7-butanoic acid, 4,9-dihydro- alpha-[(methoxycarbonyl)amino]- 4,6-dimethyl-9-oxo- 3-beta-D-ribofuranosyl methyl ester, a modified nucleoside found in some tRNA molecules.
2005-09-29 Added DEFINITION The formation from simpler components of wybutosine, 3H-imidazo[1,2-alpha]purine-7-butanoic acid, 4,9-dihydro- alpha-[(methoxycarbonyl)amino]- 4,6-dimethyl-9-oxo- 3-beta-D-ribofuranosyl methyl ester, a modified nucleoside found in some tRNA molecules.
2005-09-28 Added SYNONYM yW biosynthesis

Relationships

Timestamp Action Category Detail
2015-06-25 Deleted RELATION is a GO:1901137 (carbohydrate derivative biosynthetic process)
2013-11-28 Added RELATION is a GO:0044763 (single-organism cellular process)
2013-07-04 Added RELATION is a GO:1901659 (glycosyl compound biosynthetic process)
2013-07-04 Added RELATION is a GO:1901566 (organonitrogen compound biosynthetic process)
2013-07-04 Added RELATION is a GO:1901137 (carbohydrate derivative biosynthetic process)
2013-07-04 Added RELATION is a GO:0031590 (wybutosine metabolic process)
2013-07-04 Deleted RELATION is a GO:1901576 (organic substance biosynthetic process)
2013-06-29 Deleted RELATION is a GO:0031590 (wybutosine metabolic process)
2013-06-29 Added RELATION is a GO:1901576 (organic substance biosynthetic process)
2013-06-29 Deleted RELATION is a GO:0046114 (guanosine biosynthetic process)
2012-11-02 Added RELATION is a GO:0046114 (guanosine biosynthetic process)
2008-04-01 Updated RELATION is a GO:0031590 (wybutosine metabolic process)
2008-04-01 Updated RELATION is a GO:0006400 (tRNA modification)
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