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GO:0030570 pectate lyase activity

Term Information

ID GO:0030570
Name pectate lyase activity
Ontology Molecular Function
Definition Catalysis of the reaction: a pectate = a pectate + a pectate oligosaccharide with 4-(4-deoxy-alpha-D-galact-4-enuronosyl)-D-galacturonate end. This reaction is the eliminative cleavage of pectate to give oligosaccharides with 4-deoxy-alpha-D-gluc-4-enuronosyl groups at their non-reducing ends.
GONUTS GO:0030570 Wiki Page

Synonyms

Synonyms are alternative words or phrases closely related in meaning to the term name, with indication of the relationship between the name and synonym given by the synonym scope. Click on the icon for more details.
Type Synonym
broad pectin trans-eliminase activity
broad pectic lyase activity
exact polygalacturonic acid lyase activity
exact (1->4)-alpha-D-galacturonan lyase activity
exact polygalacturonic acid trans-eliminase activity
exact polygalacturonic transeliminase activity
exact PGA lyase activity
exact PPase-N activity
exact alpha-1,4-D-endopolygalacturonic acid lyase activity
exact endo-alpha-1,4-polygalacturonic acid lyase activity
exact endogalacturonate transeliminase activity
exact endopectin methyltranseliminase activity
exact pectate transeliminase activity
exact pectic acid lyase activity
exact pectic acid transeliminase activity
exact polygalacturonate lyase activity

Annotation Guidance

Usage of this term is subject to the following annotation guidelines:
Annotation Guidelines
Annotating to catalytic activities using the IPI evidence codeLink
Describing enzyme functions that catalyse multi-stage reactionsLink

Cross-references

Database ID
EC 4.2.2.2
InterPro IPR004898
InterPro IPR007524
MetaCyc 4.2.2.2-RXN

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Child Terms

This table lists all terms that are direct descendants (child terms) of GO:0030570:
Term has no children

Protein Annotation

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Co-occurring Terms

These tables show the number of times the term listed in the table has been co-annotated with GO:0030570. The terms are listed in descending order of number of times the term has been co-annotated.
The table on the left is calculated using both electronic and manual-evidenced annotations, while the table on the right is calculated using only manual-evidenced annotations.
Co-occurrence statistics for GO:0030570 based on the entire annotation set Co-occurrence statistics for GO:0030570 based on non-IEA annotations only

Change Log

All changes

Timestamp Action Category Detail
2011-10-10 Deleted DEFINITION Catalysis of the eliminative cleavage of pectate to give oligosaccharides with 4-deoxy-alpha-D-gluc-4-enuronosyl groups at their non-reducing ends.
2011-10-10 Added DEFINITION Catalysis of the reaction: a pectate = a pectate + a pectate oligosaccharide with 4-(4-deoxy-alpha-D-galact-4-enuronosyl)-D-galacturonate end. This reaction is the eliminative cleavage of pectate to give oligosaccharides with 4-deoxy-alpha-D-gluc-4-enuronosyl groups at their non-reducing ends.
2008-05-13 Added DEFINITION Catalysis of the eliminative cleavage of pectate to give oligosaccharides with 4-deoxy-alpha-D-gluc-4-enuronosyl groups at their non-reducing ends.
2008-05-12 Deleted DEFINITION Catalysis of the eliminative cleavage of pectate to give oligosaccharides with 4-deoxy-alpha-D-gluc-4-enuronosyl groups at their non-reducing ends.
2008-04-01 Updated RELATION is a GO:0016837 (carbon-oxygen lyase activity, acting on polysaccharides)
2007-11-08 Added SYNONYM (1->4)-alpha-D-galacturonan lyase activity
2007-09-06 Added SYNONYM polygalacturonic acid lyase activity
2007-09-06 Added SYNONYM polygalacturonic acid trans-eliminase activity
2007-09-06 Added SYNONYM polygalacturonic transeliminase activity
2007-09-06 Added SYNONYM PGA lyase activity
2007-09-06 Added SYNONYM PPase-N activity
2007-09-06 Added SYNONYM alpha-1,4-D-endopolygalacturonic acid lyase activity
2007-09-06 Added SYNONYM endo-alpha-1,4-polygalacturonic acid lyase activity
2007-09-06 Added SYNONYM endogalacturonate transeliminase activity
2007-09-06 Added SYNONYM endopectin methyltranseliminase activity
2007-09-06 Added SYNONYM pectate transeliminase activity
2007-09-06 Added SYNONYM pectic acid lyase activity
2007-09-06 Added SYNONYM pectic acid transeliminase activity
2007-09-06 Added SYNONYM pectic lyase activity
2007-09-06 Added SYNONYM pectin trans-eliminase activity
2007-09-06 Added SYNONYM polygalacturonate lyase activity
2003-10-27 Added XREF MetaCyc:4.2.2.2-RXN
2003-03-19 Updated TERM pectate lyase activity
2002-11-27 Added DEFINITION Catalysis of the eliminative cleavage of pectate to give oligosaccharides with 4-deoxy-alpha-D-gluc-4-enuronosyl groups at their non-reducing ends.
2002-03-01 Added TERM pectate lyase
2002-03-01 Added XREF EC:4.2.2.2

Term

Timestamp Action Category Detail
2003-03-19 Updated TERM pectate lyase activity
2002-03-01 Added TERM pectate lyase

Definition/synonyms

Timestamp Action Category Detail
2011-10-10 Deleted DEFINITION Catalysis of the eliminative cleavage of pectate to give oligosaccharides with 4-deoxy-alpha-D-gluc-4-enuronosyl groups at their non-reducing ends.
2011-10-10 Added DEFINITION Catalysis of the reaction: a pectate = a pectate + a pectate oligosaccharide with 4-(4-deoxy-alpha-D-galact-4-enuronosyl)-D-galacturonate end. This reaction is the eliminative cleavage of pectate to give oligosaccharides with 4-deoxy-alpha-D-gluc-4-enuronosyl groups at their non-reducing ends.
2008-05-13 Added DEFINITION Catalysis of the eliminative cleavage of pectate to give oligosaccharides with 4-deoxy-alpha-D-gluc-4-enuronosyl groups at their non-reducing ends.
2008-05-12 Deleted DEFINITION Catalysis of the eliminative cleavage of pectate to give oligosaccharides with 4-deoxy-alpha-D-gluc-4-enuronosyl groups at their non-reducing ends.
2007-11-08 Added SYNONYM (1->4)-alpha-D-galacturonan lyase activity
2007-09-06 Added SYNONYM polygalacturonic acid lyase activity
2007-09-06 Added SYNONYM polygalacturonic acid trans-eliminase activity
2007-09-06 Added SYNONYM polygalacturonic transeliminase activity
2007-09-06 Added SYNONYM PGA lyase activity
2007-09-06 Added SYNONYM PPase-N activity
2007-09-06 Added SYNONYM alpha-1,4-D-endopolygalacturonic acid lyase activity
2007-09-06 Added SYNONYM endo-alpha-1,4-polygalacturonic acid lyase activity
2007-09-06 Added SYNONYM endogalacturonate transeliminase activity
2007-09-06 Added SYNONYM endopectin methyltranseliminase activity
2007-09-06 Added SYNONYM pectate transeliminase activity
2007-09-06 Added SYNONYM pectic acid lyase activity
2007-09-06 Added SYNONYM pectic acid transeliminase activity
2007-09-06 Added SYNONYM pectic lyase activity
2007-09-06 Added SYNONYM pectin trans-eliminase activity
2007-09-06 Added SYNONYM polygalacturonate lyase activity
2002-11-27 Added DEFINITION Catalysis of the eliminative cleavage of pectate to give oligosaccharides with 4-deoxy-alpha-D-gluc-4-enuronosyl groups at their non-reducing ends.

Relationships

Timestamp Action Category Detail
2008-04-01 Updated RELATION is a GO:0016837 (carbon-oxygen lyase activity, acting on polysaccharides)

Cross-references

Timestamp Action Category Detail
2003-10-27 Added XREF MetaCyc:4.2.2.2-RXN
2002-03-01 Added XREF EC:4.2.2.2
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